RNA–Protein interactions for RNA: ENST00000470322.5

ACTR1A-202, Transcript of ARP1 actin related protein 1 homolog A, humanhuman

TSL 2

Gene ACTR1A, Length 3,519 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1A-202ENST00000470322 NISCHQ9Y2I1 1504 aa18.07■□□□□ 0.48
ACTR1A-202ENST00000470322 DCAF8L2P0C7V8 631 aa16.74■□□□□ 0.27
ACTR1A-202ENST00000470322 SHROOM4Q9ULL8 1493 aa16.67■□□□□ 0.26
ACTR1A-202ENST00000470322 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
ACTR1A-202ENST00000470322 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
ACTR1A-202ENST00000470322 PCGF6Q9BYE7 350 aa15.49■□□□□ 0.07
ACTR1A-202ENST00000470322 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
ACTR1A-202ENST00000470322 CHIC1Q5VXU3 224 aa15.4■□□□□ 0.06
ACTR1A-202ENST00000470322 LOC105371045A0A1W2PR82 267 aa15.36■□□□□ 0.05
ACTR1A-202ENST00000470322 TTBK1Q5TCY1 1321 aaPredicted RBP15.14■□□□□ 0.01
ACTR1A-202ENST00000470322 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
ACTR1A-202ENST00000470322 PPARGC1BQ86YN6 1023 aaKnown RBP15.12■□□□□ 0.01
ACTR1A-202ENST00000470322 TRIM41Q8WV44 630 aa15.11■□□□□ 0.01
ACTR1A-202ENST00000470322 MYO15BQ96JP2 1530 aa15.03■□□□□ -0
ACTR1A-202ENST00000470322 HRCP23327 699 aa14.99□□□□□ -0.01
ACTR1A-202ENST00000470322 ABCC9O60706 1549 aa14.93□□□□□ -0.02
ACTR1A-202ENST00000470322 RANGAP1P46060 587 aaPredicted RBP14.83□□□□□ -0.04
ACTR1A-202ENST00000470322 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
ACTR1A-202ENST00000470322 TRIM26Q12899 539 aaPredicted RBP14.76□□□□□ -0.05
ACTR1A-202ENST00000470322 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
ACTR1A-202ENST00000470322 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
ACTR1A-202ENST00000470322 UBTFP17480 764 aaKnown RBP14.62□□□□□ -0.07
ACTR1A-202ENST00000470322 CCER1Q8TC90 406 aaPredicted RBP14.6□□□□□ -0.07
ACTR1A-202ENST00000470322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.56□□□□□ -0.08
ACTR1A-202ENST00000470322 RSF1Q96T23 1441 aaPredicted RBP14.52□□□□□ -0.08
ACTR1A-202ENST00000470322 CECR2Q9BXF3 1484 aa14.43□□□□□ -0.1
ACTR1A-202ENST00000470322 ZEB1P37275 1124 aaPredicted RBP14.39□□□□□ -0.11
ACTR1A-202ENST00000470322 APLP2Q06481 763 aa14.37□□□□□ -0.11
ACTR1A-202ENST00000470322 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
ACTR1A-202ENST00000470322 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
ACTR1A-202ENST00000470322 RB1CC1Q8TDY2 1594 aa14.31□□□□□ -0.12
ACTR1A-202ENST00000470322 YTHDC1Q96MU7 727 aaKnown RBP14.3□□□□□ -0.12
ACTR1A-202ENST00000470322 PELP1Q8IZL8 1130 aaKnown RBP14.29□□□□□ -0.12
ACTR1A-202ENST00000470322 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
ACTR1A-202ENST00000470322 MROH2BQ7Z745 1585 aa14.22□□□□□ -0.13
ACTR1A-202ENST00000470322 ITGAEP38570 1179 aa14.21□□□□□ -0.13
ACTR1A-202ENST00000470322 CSRNP3Q8WYN3 585 aa14.16□□□□□ -0.14
ACTR1A-202ENST00000470322 DIEXFQ68CQ4 756 aaKnown RBP14.09□□□□□ -0.15
ACTR1A-202ENST00000470322 WIZO95785 1651 aa14.09□□□□□ -0.15
ACTR1A-202ENST00000470322 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
ACTR1A-202ENST00000470322 NACADO15069 1562 aa14.04□□□□□ -0.16
ACTR1A-202ENST00000470322 SOGA1O94964 1423 aa14.03□□□□□ -0.16
ACTR1A-202ENST00000470322 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
ACTR1A-202ENST00000470322 CENPBP07199 599 aaPredicted RBP13.99□□□□□ -0.17
ACTR1A-202ENST00000470322 CEP162Q5TB80 1403 aa13.94□□□□□ -0.18
ACTR1A-202ENST00000470322 P3H3Q8IVL6 736 aa13.93□□□□□ -0.18
ACTR1A-202ENST00000470322 SCAF1Q9H7N4 1312 aaKnown RBP13.93□□□□□ -0.18
ACTR1A-202ENST00000470322 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
ACTR1A-202ENST00000470322 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
ACTR1A-202ENST00000470322 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
ACTR1A-202ENST00000470322 NEUROD1Q13562 356 aa13.89□□□□□ -0.19
ACTR1A-202ENST00000470322 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
ACTR1A-202ENST00000470322 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
ACTR1A-202ENST00000470322 MYT1Q01538 1121 aa13.81□□□□□ -0.2
ACTR1A-202ENST00000470322 FAM50AQ14320 339 aaKnown RBP13.81□□□□□ -0.2
ACTR1A-202ENST00000470322 ACIN1Q9UKV3 1341 aaKnown RBP13.8□□□□□ -0.2
ACTR1A-202ENST00000470322 CLIP1P30622 1438 aa13.77□□□□□ -0.2
ACTR1A-202ENST00000470322 TNIKQ9UKE5 1360 aa13.75□□□□□ -0.21
ACTR1A-202ENST00000470322 ARID3CA6NKF2 412 aa13.74□□□□□ -0.21
ACTR1A-202ENST00000470322 MIER1Q8N108 512 aa13.74□□□□□ -0.21
ACTR1A-202ENST00000470322 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.22
ACTR1A-202ENST00000470322 GOLGA3Q08378 1498 aa13.7□□□□□ -0.22
ACTR1A-202ENST00000470322 CNGB1Q14028 1251 aaPredicted RBP13.69□□□□□ -0.22
ACTR1A-202ENST00000470322 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
ACTR1A-202ENST00000470322 SMARCA4P51532 1647 aa13.67□□□□□ -0.22
ACTR1A-202ENST00000470322 KANK4Q5T7N3 995 aaPredicted RBP13.66□□□□□ -0.22
ACTR1A-202ENST00000470322 HIRIP3Q9BW71 556 aaPredicted RBP13.66□□□□□ -0.22
ACTR1A-202ENST00000470322 SMARCA2P51531 1590 aa13.63□□□□□ -0.23
ACTR1A-202ENST00000470322 RAPGEF2Q9Y4G8 1499 aa13.59□□□□□ -0.23
ACTR1A-202ENST00000470322 EEA1Q15075 1411 aa13.59□□□□□ -0.23
ACTR1A-202ENST00000470322 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.24
ACTR1A-202ENST00000470322 BCANQ96GW7 911 aa13.58□□□□□ -0.24
ACTR1A-202ENST00000470322 ATAD2BQ9ULI0 1458 aa13.54□□□□□ -0.24
ACTR1A-202ENST00000470322 POLR3GLQ9BT43 218 aa13.51□□□□□ -0.25
ACTR1A-202ENST00000470322 DDX10Q13206 875 aaKnown RBP13.5□□□□□ -0.25
ACTR1A-202ENST00000470322 SIN3AQ96ST3 1273 aa13.49□□□□□ -0.25
ACTR1A-202ENST00000470322 VPS8Q8N3P4 1428 aa13.48□□□□□ -0.25
ACTR1A-202ENST00000470322 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
ACTR1A-202ENST00000470322 CHIC2Q9UKJ5 165 aa13.47□□□□□ -0.25
ACTR1A-202ENST00000470322 SYNJ1O43426 1573 aa13.44□□□□□ -0.26
ACTR1A-202ENST00000470322 KIF27Q86VH2 1401 aa13.44□□□□□ -0.26
ACTR1A-202ENST00000470322 FBLN2P98095 1184 aa13.43□□□□□ -0.26
ACTR1A-202ENST00000470322 CUX2O14529 1486 aa13.41□□□□□ -0.26
ACTR1A-202ENST00000470322 KCNH8Q96L42 1107 aa13.36□□□□□ -0.27
ACTR1A-202ENST00000470322 BICRAQ9NZM4 1560 aa13.36□□□□□ -0.27
ACTR1A-202ENST00000470322 ZNF326Q5BKZ1 582 aaKnown RBP13.36□□□□□ -0.27
ACTR1A-202ENST00000470322 NEFLP07196 543 aa13.35□□□□□ -0.27
ACTR1A-202ENST00000470322 RRP7BPQ9NSQ0 103 aa13.35□□□□□ -0.27
ACTR1A-202ENST00000470322 CARMIL1Q5VZK9 1371 aa13.34□□□□□ -0.27
ACTR1A-202ENST00000470322 CCNB3Q8WWL7 1395 aa13.34□□□□□ -0.27
ACTR1A-202ENST00000470322 SENP3-EIF4A1A0A087X0R7 540 aa13.33□□□□□ -0.28
ACTR1A-202ENST00000470322 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
ACTR1A-202ENST00000470322 ZNF777Q9ULD5 760 aaPredicted RBP13.31□□□□□ -0.28
ACTR1A-202ENST00000470322 BCL11AQ9H165 835 aa13.3□□□□□ -0.28
ACTR1A-202ENST00000470322 KIF21BO75037 1637 aa13.28□□□□□ -0.28
ACTR1A-202ENST00000470322 DHX57Q6P158 1386 aaKnown RBP13.28□□□□□ -0.28
ACTR1A-202ENST00000470322 TDRD9Q8NDG6 1382 aaKnown RBP13.28□□□□□ -0.28
ACTR1A-202ENST00000470322 ANP32CO43423 234 aa13.28□□□□□ -0.28
ACTR1A-202ENST00000470322 MTUS2Q5JR59 1369 aa13.28□□□□□ -0.28
ACTR1A-202ENST00000470322 EIF4G1Q04637 1599 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms