RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 PRG4Q92954 1404 aaPredicted RBP26.05■■□□□ 1.76
FDPS-208ENST00000470171 RAPGEF2Q9Y4G8 1499 aa26.02■■□□□ 1.76
FDPS-208ENST00000470171 RUSC2Q8N2Y8 1516 aa26■■□□□ 1.75
FDPS-208ENST00000470171 EEA1Q15075 1411 aa25.94■■□□□ 1.74
FDPS-208ENST00000470171 CARMIL2Q6F5E8 1435 aa25.91■■□□□ 1.74
FDPS-208ENST00000470171 ERCC6L2Q5T890 1561 aa25.9■■□□□ 1.74
FDPS-208ENST00000470171 PRXQ9BXM0 1461 aa25.87■■□□□ 1.73
FDPS-208ENST00000470171 TRHP20396 242 aaPredicted RBP25.87■■□□□ 1.73
FDPS-208ENST00000470171 CSRNP3Q8WYN3 585 aa25.87■■□□□ 1.73
FDPS-208ENST00000470171 IQGAP2Q13576 1575 aa25.82■■□□□ 1.72
FDPS-208ENST00000470171 NPM1P06748 294 aaKnown RBP eCLIP25.82■■□□□ 1.723e-6■□□□□ 8.1
FDPS-208ENST00000470171 TNIKQ9UKE5 1360 aa25.8■■□□□ 1.72
FDPS-208ENST00000470171 PTPRGP23470 1445 aa25.79■■□□□ 1.72
FDPS-208ENST00000470171 UGGT2Q9NYU1 1516 aa25.74■■□□□ 1.71
FDPS-208ENST00000470171 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
FDPS-208ENST00000470171 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
FDPS-208ENST00000470171 GOLGA3Q08378 1498 aa25.69■■□□□ 1.7
FDPS-208ENST00000470171 DISP1Q96F81 1524 aa25.65■■□□□ 1.7
FDPS-208ENST00000470171 UHRF1BP1LA0JNW5 1464 aa25.61■■□□□ 1.69
FDPS-208ENST00000470171 UACAQ9BZF9 1416 aa25.59■■□□□ 1.69
FDPS-208ENST00000470171 MAPKBP1O60336 1514 aa25.58■■□□□ 1.69
FDPS-208ENST00000470171 ABCC2Q92887 1545 aa25.54■■□□□ 1.68
FDPS-208ENST00000470171 KIAA0556O60303 1618 aa25.54■■□□□ 1.68
FDPS-208ENST00000470171 ADCY10Q96PN6 1610 aa25.53■■□□□ 1.68
FDPS-208ENST00000470171 CTTNBP2Q8WZ74 1663 aa25.52■■□□□ 1.68
FDPS-208ENST00000470171 TTBK1Q5TCY1 1321 aaPredicted RBP25.51■■□□□ 1.67
FDPS-208ENST00000470171 ABCC10Q5T3U5 1492 aa25.5■■□□□ 1.67
FDPS-208ENST00000470171 FAM69CQ0P6D2 419 aa25.47■■□□□ 1.67
FDPS-208ENST00000470171 PLB1Q6P1J6 1458 aa25.46■■□□□ 1.67
FDPS-208ENST00000470171 KIF21BO75037 1637 aa25.45■■□□□ 1.67
FDPS-208ENST00000470171 KDM5BQ9UGL1 1544 aa25.43■■□□□ 1.66
FDPS-208ENST00000470171 ASXL2Q76L83 1435 aa25.37■■□□□ 1.65
FDPS-208ENST00000470171 UBTFP17480 764 aaKnown RBP25.36■■□□□ 1.65
FDPS-208ENST00000470171 SAMD9Q5K651 1589 aa25.31■■□□□ 1.64
FDPS-208ENST00000470171 ABCA8O94911 1581 aa25.31■■□□□ 1.64
FDPS-208ENST00000470171 DIP2BQ9P265 1576 aa25.31■■□□□ 1.64
FDPS-208ENST00000470171 P3H3Q8IVL6 736 aa25.3■■□□□ 1.64
FDPS-208ENST00000470171 EFCAB5A4FU69 1503 aa25.29■■□□□ 1.64
FDPS-208ENST00000470171 GLI2P10070 1586 aa25.27■■□□□ 1.64
FDPS-208ENST00000470171 WDR7Q9Y4E6 1490 aa25.22■■□□□ 1.63
FDPS-208ENST00000470171 EPRSP07814 1512 aaKnown RBP25.21■■□□□ 1.63
FDPS-208ENST00000470171 KIF13AQ9H1H9 1805 aa25.21■■□□□ 1.63
FDPS-208ENST00000470171 ZCCHC11Q5TAX3 1644 aaKnown RBP25.19■■□□□ 1.62
FDPS-208ENST00000470171 RANGAP1P46060 587 aaPredicted RBP25.18■■□□□ 1.62
FDPS-208ENST00000470171 ATP10BO94823 1461 aa25.15■■□□□ 1.62
FDPS-208ENST00000470171 FHOD3Q2V2M9 1422 aa25.15■■□□□ 1.62
FDPS-208ENST00000470171 FMN1Q68DA7 1419 aa25.15■■□□□ 1.62
FDPS-208ENST00000470171 TEX14Q8IWB6 1497 aa25.13■■□□□ 1.61
FDPS-208ENST00000470171 RAPGEF6Q8TEU7 1601 aa25.1■■□□□ 1.61
FDPS-208ENST00000470171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.09■■□□□ 1.61
FDPS-208ENST00000470171 HNRNPUL2Q1KMD3 747 aaKnown RBP25.09■■□□□ 1.61
FDPS-208ENST00000470171 KCNH8Q96L42 1107 aa25.08■■□□□ 1.61
FDPS-208ENST00000470171 PLEKHD1A6NEE1 506 aa25.07■■□□□ 1.6
FDPS-208ENST00000470171 EHMT2Q96KQ7 1210 aa25.06■■□□□ 1.6
FDPS-208ENST00000470171 NUP153P49790 1475 aaKnown RBP25.06■■□□□ 1.6
FDPS-208ENST00000470171 CD109Q6YHK3 1445 aa25.04■■□□□ 1.6
FDPS-208ENST00000470171 ARHGAP35Q9NRY4 1499 aa25.04■■□□□ 1.6
FDPS-208ENST00000470171 MAGI3Q5TCQ9 1506 aa25.02■■□□□ 1.6
FDPS-208ENST00000470171 CDK11AQ9UQ88 783 aaPredicted RBP25.02■■□□□ 1.6
FDPS-208ENST00000470171 PHLDB1Q86UU1 1377 aa25.02■■□□□ 1.6
FDPS-208ENST00000470171 MAP3K4Q9Y6R4 1608 aa25.01■■□□□ 1.59
FDPS-208ENST00000470171 ARID3CA6NKF2 412 aa24.99■■□□□ 1.59
FDPS-208ENST00000470171 KDM6BO15054 1643 aa24.97■■□□□ 1.59
FDPS-208ENST00000470171 CFAP43Q8NDM7 1665 aa24.94■■□□□ 1.58
FDPS-208ENST00000470171 CLIP1P30622 1438 aa24.9■■□□□ 1.58
FDPS-208ENST00000470171 ATP1B4Q9UN42 357 aaPredicted RBP24.89■■□□□ 1.58
FDPS-208ENST00000470171 HECW1Q76N89 1606 aa24.88■■□□□ 1.57
FDPS-208ENST00000470171 PPRC1Q5VV67 1664 aaKnown RBP24.87■■□□□ 1.57
FDPS-208ENST00000470171 CASKIN1Q8WXD9 1431 aa24.86■■□□□ 1.57
FDPS-208ENST00000470171 ABCA9Q8IUA7 1624 aa24.86■■□□□ 1.57
FDPS-208ENST00000470171 TSPOAP1O95153 1857 aa24.86■■□□□ 1.57
FDPS-208ENST00000470171 NEO1Q92859 1461 aa24.83■■□□□ 1.57
FDPS-208ENST00000470171 ARAP3Q8WWN8 1544 aa24.81■■□□□ 1.56
FDPS-208ENST00000470171 CCDC18Q5T9S5 1454 aa24.81■■□□□ 1.56
FDPS-208ENST00000470171 COL17A1Q9UMD9 1497 aaPredicted RBP24.79■■□□□ 1.56
FDPS-208ENST00000470171 AEBP2Q6ZN18 517 aaPredicted RBP24.77■■□□□ 1.56
FDPS-208ENST00000470171 FYCO1Q9BQS8 1478 aa24.77■■□□□ 1.56
FDPS-208ENST00000470171 TROQ12816 1431 aaPredicted RBP24.75■■□□□ 1.55
FDPS-208ENST00000470171 CDK13Q14004 1512 aaKnown RBP24.75■■□□□ 1.55
FDPS-208ENST00000470171 PLCH2O75038 1416 aa24.71■■□□□ 1.55
FDPS-208ENST00000470171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.71■■□□□ 1.556e-8■■■■□ 20.3
FDPS-208ENST00000470171 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
FDPS-208ENST00000470171 EFCAB2Q5VUJ9 269 aa24.69■■□□□ 1.54
FDPS-208ENST00000470171 FANCAO15360 1455 aa24.67■■□□□ 1.54
FDPS-208ENST00000470171 AKNAQ7Z591 1439 aa24.66■■□□□ 1.54
FDPS-208ENST00000470171 CFAP74Q9C0B2 1584 aa24.64■■□□□ 1.54
FDPS-208ENST00000470171 DENND4BO75064 1496 aaPredicted RBP24.63■■□□□ 1.53
FDPS-208ENST00000470171 PCF11O94913 1555 aaKnown RBP24.63■■□□□ 1.53
FDPS-208ENST00000470171 KIF14Q15058 1648 aa24.61■■□□□ 1.53
FDPS-208ENST00000470171 RAPGEF3O95398 923 aa24.59■■□□□ 1.53
FDPS-208ENST00000470171 LOC105371045A0A1W2PR82 267 aa24.58■■□□□ 1.53
FDPS-208ENST00000470171 TTC37Q6PGP7 1564 aa24.57■■□□□ 1.52
FDPS-208ENST00000470171 KDM4FA0A1W2PPD8 638 aa24.55■■□□□ 1.52
FDPS-208ENST00000470171 MAGI2Q86UL8 1455 aa24.54■■□□□ 1.52
FDPS-208ENST00000470171 ADGRL1O94910 1474 aa24.52■■□□□ 1.52
FDPS-208ENST00000470171 MTUS2Q5JR59 1369 aa24.52■■□□□ 1.52
FDPS-208ENST00000470171 SCAPERQ9BY12 1400 aa24.52■■□□□ 1.52
FDPS-208ENST00000470171 ARHGAP5Q13017 1502 aa24.47■■□□□ 1.51
FDPS-208ENST00000470171 VPS8Q8N3P4 1428 aa24.47■■□□□ 1.51
FDPS-208ENST00000470171 POGZQ7Z3K3 1410 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms