RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 WDR97A6NE52 1622 aa10.32□□□□□ -0.76
GAPVD1-215ENST00000470056 DNAJC5BQ9UF47 199 aa10.31□□□□□ -0.76
GAPVD1-215ENST00000470056 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
GAPVD1-215ENST00000470056 MAP3K1Q13233 1512 aa10.3□□□□□ -0.76
GAPVD1-215ENST00000470056 ABCA5Q8WWZ7 1642 aa10.3□□□□□ -0.76
GAPVD1-215ENST00000470056 WDR62O43379 1518 aa10.3□□□□□ -0.76
GAPVD1-215ENST00000470056 HNRNPUL2Q1KMD3 747 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-215ENST00000470056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-215ENST00000470056 P3H3Q8IVL6 736 aa10.27□□□□□ -0.76
GAPVD1-215ENST00000470056 AQRO60306 1485 aaKnown RBP eCLIP10.27□□□□□ -0.772e-6■■■■■ 28.9
GAPVD1-215ENST00000470056 FYCO1Q9BQS8 1478 aa10.27□□□□□ -0.77
GAPVD1-215ENST00000470056 CASKIN1Q8WXD9 1431 aa10.26□□□□□ -0.77
GAPVD1-215ENST00000470056 FHOD3Q2V2M9 1422 aa10.25□□□□□ -0.77
GAPVD1-215ENST00000470056 CHMP7Q8WUX9 453 aaPredicted RBP10.25□□□□□ -0.77
GAPVD1-215ENST00000470056 TARBP1Q13395 1621 aaKnown RBP10.25□□□□□ -0.77
GAPVD1-215ENST00000470056 CCNB3Q8WWL7 1395 aa10.24□□□□□ -0.77
GAPVD1-215ENST00000470056 MTUS2Q5JR59 1369 aa10.23□□□□□ -0.77
GAPVD1-215ENST00000470056 ERICH6Q7L0X2 663 aa10.23□□□□□ -0.77
GAPVD1-215ENST00000470056 TIAM1Q13009 1591 aa10.22□□□□□ -0.77
GAPVD1-215ENST00000470056 CTTNBP2Q8WZ74 1663 aa10.22□□□□□ -0.77
GAPVD1-215ENST00000470056 MAGI1Q96QZ7 1491 aaPredicted RBP10.22□□□□□ -0.77
GAPVD1-215ENST00000470056 KANK4Q5T7N3 995 aaPredicted RBP10.22□□□□□ -0.77
GAPVD1-215ENST00000470056 CDK11AQ9UQ88 783 aaPredicted RBP10.21□□□□□ -0.77
GAPVD1-215ENST00000470056 CLSPNQ9HAW4 1339 aa10.21□□□□□ -0.77
GAPVD1-215ENST00000470056 ADAMTS12P58397 1594 aa10.21□□□□□ -0.77
GAPVD1-215ENST00000470056 RRBP1Q9P2E9 1410 aaKnown RBP10.21□□□□□ -0.77
GAPVD1-215ENST00000470056 LRRC9Q6ZRR7 1453 aa10.2□□□□□ -0.78
GAPVD1-215ENST00000470056 CCDC18Q5T9S5 1454 aa10.19□□□□□ -0.78
GAPVD1-215ENST00000470056 FBLN2P98095 1184 aa10.19□□□□□ -0.78
GAPVD1-215ENST00000470056 IQGAP2Q13576 1575 aa10.19□□□□□ -0.78
GAPVD1-215ENST00000470056 KIAA0586Q9BVV6 1533 aa10.19□□□□□ -0.78
GAPVD1-215ENST00000470056 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-215ENST00000470056 FAM50AQ14320 339 aaKnown RBP10.18□□□□□ -0.78
GAPVD1-215ENST00000470056 CARMIL2Q6F5E8 1435 aa10.18□□□□□ -0.78
GAPVD1-215ENST00000470056 SNAPC4Q5SXM2 1469 aa10.18□□□□□ -0.78
GAPVD1-215ENST00000470056 PBRM1Q86U86 1689 aa10.17□□□□□ -0.78
GAPVD1-215ENST00000470056 PCF11O94913 1555 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-215ENST00000470056 SYNJ2O15056 1496 aa10.16□□□□□ -0.78
GAPVD1-215ENST00000470056 ACIN1Q9UKV3 1341 aaKnown RBP10.15□□□□□ -0.78
GAPVD1-215ENST00000470056 GRIN2AQ12879 1464 aa10.15□□□□□ -0.78
GAPVD1-215ENST00000470056 ITGAEP38570 1179 aa10.15□□□□□ -0.78
GAPVD1-215ENST00000470056 ZNF608Q9ULD9 1512 aaPredicted RBP10.15□□□□□ -0.79
GAPVD1-215ENST00000470056 SAMD9Q5K651 1589 aa10.15□□□□□ -0.79
GAPVD1-215ENST00000470056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.14□□□□□ -0.79
GAPVD1-215ENST00000470056 HECW1Q76N89 1606 aa10.13□□□□□ -0.79
GAPVD1-215ENST00000470056 EIF4G3O43432 1585 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-215ENST00000470056 CFAP43Q8NDM7 1665 aa10.13□□□□□ -0.79
GAPVD1-215ENST00000470056 NEFLP07196 543 aa10.13□□□□□ -0.79
GAPVD1-215ENST00000470056 EHBP1L1Q8N3D4 1523 aa10.12□□□□□ -0.79
GAPVD1-215ENST00000470056 UGGT2Q9NYU1 1516 aa10.12□□□□□ -0.79
GAPVD1-215ENST00000470056 PHLDB1Q86UU1 1377 aa10.09□□□□□ -0.79
GAPVD1-215ENST00000470056 SETD5Q9C0A6 1442 aa10.08□□□□□ -0.8
GAPVD1-215ENST00000470056 YTHDC1Q96MU7 727 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-215ENST00000470056 MYOM3Q5VTT5 1437 aa10.08□□□□□ -0.8
GAPVD1-215ENST00000470056 FGD6Q6ZV73 1430 aa10.07□□□□□ -0.8
GAPVD1-215ENST00000470056 NCOA2Q15596 1464 aa10.06□□□□□ -0.8
GAPVD1-215ENST00000470056 JPH4Q96JJ6 628 aa10.06□□□□□ -0.8
GAPVD1-215ENST00000470056 NUP160Q12769 1436 aa10.05□□□□□ -0.8
GAPVD1-215ENST00000470056 EPRSP07814 1512 aaKnown RBP10.05□□□□□ -0.8
GAPVD1-215ENST00000470056 SUPT6HQ7KZ85 1726 aaKnown RBP10.04□□□□□ -0.8
GAPVD1-215ENST00000470056 KIAA0556O60303 1618 aa10.04□□□□□ -0.8
GAPVD1-215ENST00000470056 MIA2Q96PC5 1412 aa10.03□□□□□ -0.8
GAPVD1-215ENST00000470056 ZNF316A6NFI3 1004 aaPredicted RBP10.03□□□□□ -0.8
GAPVD1-215ENST00000470056 DHX57Q6P158 1386 aaKnown RBP10.03□□□□□ -0.8
GAPVD1-215ENST00000470056 RAB3GAP2Q9H2M9 1393 aa10.03□□□□□ -0.8
GAPVD1-215ENST00000470056 PLEKHD1A6NEE1 506 aa10.02□□□□□ -0.8
GAPVD1-215ENST00000470056 TIMELESSQ9UNS1 1208 aa10.02□□□□□ -0.81
GAPVD1-215ENST00000470056 DISP1Q96F81 1524 aa10□□□□□ -0.81
GAPVD1-215ENST00000470056 ARID3CA6NKF2 412 aa10□□□□□ -0.81
GAPVD1-215ENST00000470056 PTPRGP23470 1445 aa9.98□□□□□ -0.81
GAPVD1-215ENST00000470056 DIEXFQ68CQ4 756 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-215ENST00000470056 RAPGEF6Q8TEU7 1601 aa9.98□□□□□ -0.81
GAPVD1-215ENST00000470056 TROQ12816 1431 aaPredicted RBP9.97□□□□□ -0.81
GAPVD1-215ENST00000470056 CEP170Q5SW79 1584 aa9.97□□□□□ -0.81
GAPVD1-215ENST00000470056 CFDP1Q9UEE9 299 aaPredicted RBP9.97□□□□□ -0.81
GAPVD1-215ENST00000470056 PRG4Q92954 1404 aaPredicted RBP9.96□□□□□ -0.81
GAPVD1-215ENST00000470056 HFM1A2PYH4 1435 aa9.96□□□□□ -0.81
GAPVD1-215ENST00000470056 NUP153P49790 1475 aaKnown RBP9.95□□□□□ -0.82
GAPVD1-215ENST00000470056 CDK13Q14004 1512 aaKnown RBP9.95□□□□□ -0.82
GAPVD1-215ENST00000470056 AKNAQ7Z591 1439 aa9.95□□□□□ -0.82
GAPVD1-215ENST00000470056 TCOF1Q13428 1488 aaKnown RBP9.95□□□□□ -0.82
GAPVD1-215ENST00000470056 TRIM52Q96A61 297 aa9.94□□□□□ -0.82
GAPVD1-215ENST00000470056 ARHGEF11O15085 1522 aa9.93□□□□□ -0.82
GAPVD1-215ENST00000470056 PTPN23Q9H3S7 1636 aa9.93□□□□□ -0.82
GAPVD1-215ENST00000470056 TONSLQ96HA7 1378 aa9.92□□□□□ -0.82
GAPVD1-215ENST00000470056 UACAQ9BZF9 1416 aa9.92□□□□□ -0.82
GAPVD1-215ENST00000470056 ZNF777Q9ULD5 760 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-215ENST00000470056 ROCK1Q13464 1354 aa9.9□□□□□ -0.82
GAPVD1-215ENST00000470056 PLB1Q6P1J6 1458 aa9.9□□□□□ -0.82
GAPVD1-215ENST00000470056 TSPY4P0CV99 314 aa9.9□□□□□ -0.82
GAPVD1-215ENST00000470056 TSPY10P0CW01 314 aa9.9□□□□□ -0.82
GAPVD1-215ENST00000470056 CHIC2Q9UKJ5 165 aa9.9□□□□□ -0.82
GAPVD1-215ENST00000470056 RSPH4AQ5TD94 716 aa9.9□□□□□ -0.83
GAPVD1-215ENST00000470056 NEUROD1Q13562 356 aa9.89□□□□□ -0.83
GAPVD1-215ENST00000470056 RRP7BPQ9NSQ0 103 aa9.89□□□□□ -0.83
GAPVD1-215ENST00000470056 ANKRD30AQ9BXX3 1397 aa9.88□□□□□ -0.83
GAPVD1-215ENST00000470056 KIF14Q15058 1648 aa9.87□□□□□ -0.83
GAPVD1-215ENST00000470056 MAGI3Q5TCQ9 1506 aa9.87□□□□□ -0.83
GAPVD1-215ENST00000470056 NAIPQ13075 1403 aa9.87□□□□□ -0.83
GAPVD1-215ENST00000470056 ITSN2Q9NZM3 1697 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms