RNA–Protein interactions for RNA: ENST00000469719.5

SGSM3-207, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-207ENST00000469719 KIF21BO75037 1637 aa25.54■■□□□ 1.68
SGSM3-207ENST00000469719 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
SGSM3-207ENST00000469719 SHROOM2Q13796 1616 aa25.51■■□□□ 1.67
SGSM3-207ENST00000469719 IQGAP2Q13576 1575 aa25.5■■□□□ 1.67
SGSM3-207ENST00000469719 CARMIL2Q6F5E8 1435 aa25.5■■□□□ 1.67
SGSM3-207ENST00000469719 PRG4Q92954 1404 aaPredicted RBP25.48■■□□□ 1.67
SGSM3-207ENST00000469719 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
SGSM3-207ENST00000469719 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.67
SGSM3-207ENST00000469719 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.67
SGSM3-207ENST00000469719 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.67
SGSM3-207ENST00000469719 UBTFP17480 764 aaKnown RBP25.44■■□□□ 1.66
SGSM3-207ENST00000469719 CTTNBP2Q8WZ74 1663 aa25.42■■□□□ 1.66
SGSM3-207ENST00000469719 UGGT2Q9NYU1 1516 aa25.39■■□□□ 1.66
SGSM3-207ENST00000469719 CYB5RLQ6IPT4 315 aa25.37■■□□□ 1.65
SGSM3-207ENST00000469719 TNIKQ9UKE5 1360 aa25.32■■□□□ 1.64
SGSM3-207ENST00000469719 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
SGSM3-207ENST00000469719 PTPRGP23470 1445 aa25.28■■□□□ 1.64
SGSM3-207ENST00000469719 DISP1Q96F81 1524 aa25.24■■□□□ 1.63
SGSM3-207ENST00000469719 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
SGSM3-207ENST00000469719 KIAA0556O60303 1618 aa25.19■■□□□ 1.62
SGSM3-207ENST00000469719 EFCAB5A4FU69 1503 aa25.19■■□□□ 1.62
SGSM3-207ENST00000469719 NPM1P06748 294 aaKnown RBP eCLIP25.19■■□□□ 1.62
SGSM3-207ENST00000469719 EHMT2Q96KQ7 1210 aa25.19■■□□□ 1.62
SGSM3-207ENST00000469719 SAMD9Q5K651 1589 aa25.12■■□□□ 1.61
SGSM3-207ENST00000469719 RANGAP1P46060 587 aaPredicted RBP25.1■■□□□ 1.61
SGSM3-207ENST00000469719 UACAQ9BZF9 1416 aa25.09■■□□□ 1.61
SGSM3-207ENST00000469719 P3H3Q8IVL6 736 aa25.07■■□□□ 1.6
SGSM3-207ENST00000469719 UHRF1BP1LA0JNW5 1464 aa25.07■■□□□ 1.6
SGSM3-207ENST00000469719 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
SGSM3-207ENST00000469719 FMN1Q68DA7 1419 aa25.03■■□□□ 1.6
SGSM3-207ENST00000469719 CLIP1P30622 1438 aa25■■□□□ 1.59
SGSM3-207ENST00000469719 LOC105371045A0A1W2PR82 267 aa24.99■■□□□ 1.59
SGSM3-207ENST00000469719 ABCC2Q92887 1545 aa24.98■■□□□ 1.59
SGSM3-207ENST00000469719 ARHGAP35Q9NRY4 1499 aa24.97■■□□□ 1.59
SGSM3-207ENST00000469719 FHOD3Q2V2M9 1422 aa24.95■■□□□ 1.59
SGSM3-207ENST00000469719 ADCY10Q96PN6 1610 aa24.92■■□□□ 1.58
SGSM3-207ENST00000469719 ABCA8O94911 1581 aa24.92■■□□□ 1.58
SGSM3-207ENST00000469719 PLB1Q6P1J6 1458 aa24.9■■□□□ 1.58
SGSM3-207ENST00000469719 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
SGSM3-207ENST00000469719 KDM5BQ9UGL1 1544 aa24.9■■□□□ 1.58
SGSM3-207ENST00000469719 RAPGEF6Q8TEU7 1601 aa24.86■■□□□ 1.57
SGSM3-207ENST00000469719 MAPKBP1O60336 1514 aa24.86■■□□□ 1.57
SGSM3-207ENST00000469719 TRHP20396 242 aaPredicted RBP24.82■■□□□ 1.56
SGSM3-207ENST00000469719 CDK11AQ9UQ88 783 aaPredicted RBP24.82■■□□□ 1.56
SGSM3-207ENST00000469719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.8■■□□□ 1.56
SGSM3-207ENST00000469719 HNRNPUL2Q1KMD3 747 aaKnown RBP24.8■■□□□ 1.56
SGSM3-207ENST00000469719 ATP1B4Q9UN42 357 aaPredicted RBP24.78■■□□□ 1.56
SGSM3-207ENST00000469719 PLEKHD1A6NEE1 506 aa24.77■■□□□ 1.56
SGSM3-207ENST00000469719 CASKIN1Q8WXD9 1431 aa24.77■■□□□ 1.56
SGSM3-207ENST00000469719 ATP10BO94823 1461 aa24.76■■□□□ 1.55
SGSM3-207ENST00000469719 ASXL2Q76L83 1435 aa24.75■■□□□ 1.55
SGSM3-207ENST00000469719 HECW1Q76N89 1606 aa24.75■■□□□ 1.55
SGSM3-207ENST00000469719 NUP153P49790 1475 aaKnown RBP24.74■■□□□ 1.55
SGSM3-207ENST00000469719 ZCCHC11Q5TAX3 1644 aaKnown RBP24.74■■□□□ 1.55
SGSM3-207ENST00000469719 ABCC10Q5T3U5 1492 aa24.71■■□□□ 1.55
SGSM3-207ENST00000469719 FYCO1Q9BQS8 1478 aa24.71■■□□□ 1.55
SGSM3-207ENST00000469719 CCDC18Q5T9S5 1454 aa24.7■■□□□ 1.54
SGSM3-207ENST00000469719 FAM69CQ0P6D2 419 aa24.69■■□□□ 1.54
SGSM3-207ENST00000469719 WDR7Q9Y4E6 1490 aa24.69■■□□□ 1.54
SGSM3-207ENST00000469719 EPRSP07814 1512 aaKnown RBP24.66■■□□□ 1.54
SGSM3-207ENST00000469719 VPS8Q8N3P4 1428 aa24.63■■□□□ 1.53
SGSM3-207ENST00000469719 ARID3CA6NKF2 412 aa24.63■■□□□ 1.53
SGSM3-207ENST00000469719 GLI2P10070 1586 aa24.62■■□□□ 1.53
SGSM3-207ENST00000469719 APLP2Q06481 763 aa24.6■■□□□ 1.53
SGSM3-207ENST00000469719 KCNH8Q96L42 1107 aa24.6■■□□□ 1.53
SGSM3-207ENST00000469719 PCF11O94913 1555 aaKnown RBP24.58■■□□□ 1.52
SGSM3-207ENST00000469719 DIP2BQ9P265 1576 aa24.58■■□□□ 1.52
SGSM3-207ENST00000469719 CDK13Q14004 1512 aaKnown RBP24.51■■□□□ 1.51
SGSM3-207ENST00000469719 TROQ12816 1431 aaPredicted RBP24.51■■□□□ 1.51
SGSM3-207ENST00000469719 KIF13AQ9H1H9 1805 aa24.49■■□□□ 1.51
SGSM3-207ENST00000469719 MAP3K1Q13233 1512 aa24.48■■□□□ 1.51
SGSM3-207ENST00000469719 CD109Q6YHK3 1445 aa24.48■■□□□ 1.51
SGSM3-207ENST00000469719 TEX14Q8IWB6 1497 aa24.48■■□□□ 1.51
SGSM3-207ENST00000469719 MTUS2Q5JR59 1369 aa24.46■■□□□ 1.51
SGSM3-207ENST00000469719 PHLDB1Q86UU1 1377 aa24.46■■□□□ 1.51
SGSM3-207ENST00000469719 CFAP43Q8NDM7 1665 aa24.46■■□□□ 1.51
SGSM3-207ENST00000469719 ABCA9Q8IUA7 1624 aa24.43■■□□□ 1.5
SGSM3-207ENST00000469719 MAGI3Q5TCQ9 1506 aa24.42■■□□□ 1.5
SGSM3-207ENST00000469719 MAP3K4Q9Y6R4 1608 aa24.41■■□□□ 1.5
SGSM3-207ENST00000469719 KIF14Q15058 1648 aa24.39■■□□□ 1.5
SGSM3-207ENST00000469719 LRRIQ1Q96JM4 1722 aa24.38■■□□□ 1.49
SGSM3-207ENST00000469719 TIAM1Q13009 1591 aa24.35■■□□□ 1.49
SGSM3-207ENST00000469719 EHBP1L1Q8N3D4 1523 aa24.35■■□□□ 1.49
SGSM3-207ENST00000469719 EFCAB2Q5VUJ9 269 aa24.34■■□□□ 1.49
SGSM3-207ENST00000469719 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.34■■□□□ 1.49
SGSM3-207ENST00000469719 PLCH2O75038 1416 aa24.32■■□□□ 1.48
SGSM3-207ENST00000469719 NEO1Q92859 1461 aa24.32■■□□□ 1.48
SGSM3-207ENST00000469719 ARAP3Q8WWN8 1544 aa24.31■■□□□ 1.48
SGSM3-207ENST00000469719 TSPOAP1O95153 1857 aa24.3■■□□□ 1.48
SGSM3-207ENST00000469719 LRRC9Q6ZRR7 1453 aa24.29■■□□□ 1.48
SGSM3-207ENST00000469719 CCNB3Q8WWL7 1395 aa24.28■■□□□ 1.48
SGSM3-207ENST00000469719 CFAP74Q9C0B2 1584 aa24.27■■□□□ 1.48
SGSM3-207ENST00000469719 FANCAO15360 1455 aa24.24■■□□□ 1.47
SGSM3-207ENST00000469719 SUPT6HQ7KZ85 1726 aaKnown RBP24.23■■□□□ 1.47
SGSM3-207ENST00000469719 MYO5CQ9NQX4 1742 aa24.23■■□□□ 1.47
SGSM3-207ENST00000469719 TTC37Q6PGP7 1564 aa24.22■■□□□ 1.47
SGSM3-207ENST00000469719 CFDP1Q9UEE9 299 aaPredicted RBP24.21■■□□□ 1.47
SGSM3-207ENST00000469719 PPRC1Q5VV67 1664 aaKnown RBP24.21■■□□□ 1.47
SGSM3-207ENST00000469719 AKNAQ7Z591 1439 aa24.19■■□□□ 1.46
SGSM3-207ENST00000469719 KANK4Q5T7N3 995 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms