RNA–Protein interactions for RNA: ENST00000469719.5

SGSM3-207, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-207ENST00000469719 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.53
SGSM3-207ENST00000469719 CCDC180Q9P1Z9 1646 aa32.86■■■□□ 2.85
SGSM3-207ENST00000469719 ABCC9O60706 1549 aa31.77■■■□□ 2.68
SGSM3-207ENST00000469719 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
SGSM3-207ENST00000469719 NACADO15069 1562 aa30.92■■■□□ 2.54
SGSM3-207ENST00000469719 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.54
SGSM3-207ENST00000469719 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
SGSM3-207ENST00000469719 RB1CC1Q8TDY2 1594 aa30.85■■■□□ 2.53
SGSM3-207ENST00000469719 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
SGSM3-207ENST00000469719 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
SGSM3-207ENST00000469719 SCRIBQ14160 1630 aa29.84■■■□□ 2.37
SGSM3-207ENST00000469719 PABPN1Q86U42 306 aaKnown RBP eCLIP29.75■■■□□ 2.35
SGSM3-207ENST00000469719 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
SGSM3-207ENST00000469719 BICRAQ9NZM4 1560 aa29.7■■■□□ 2.35
SGSM3-207ENST00000469719 EIF4G1Q04637 1599 aaKnown RBP28.98■■■□□ 2.23
SGSM3-207ENST00000469719 DNAJC5BQ9UF47 199 aa28.85■■■□□ 2.21
SGSM3-207ENST00000469719 BAZ1AQ9NRL2 1556 aaPredicted RBP28.78■■■□□ 2.2
SGSM3-207ENST00000469719 CC2D2AQ9P2K1 1620 aa28.77■■■□□ 2.2
SGSM3-207ENST00000469719 CECR2Q9BXF3 1484 aa28.71■■■□□ 2.19
SGSM3-207ENST00000469719 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
SGSM3-207ENST00000469719 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
SGSM3-207ENST00000469719 NCAPD3P42695 1498 aa28.51■■■□□ 2.15
SGSM3-207ENST00000469719 ATAD2BQ9ULI0 1458 aa28.48■■■□□ 2.15
SGSM3-207ENST00000469719 MROH2BQ7Z745 1585 aa28.46■■■□□ 2.15
SGSM3-207ENST00000469719 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
SGSM3-207ENST00000469719 HMGXB3Q12766 1538 aa28.35■■■□□ 2.13
SGSM3-207ENST00000469719 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
SGSM3-207ENST00000469719 BAZ1BQ9UIG0 1483 aaKnown RBP28.29■■■□□ 2.12
SGSM3-207ENST00000469719 WIZO95785 1651 aa28.13■■■□□ 2.09
SGSM3-207ENST00000469719 TOP2AP11388 1531 aaKnown RBP27.97■■■□□ 2.07
SGSM3-207ENST00000469719 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
SGSM3-207ENST00000469719 LAMC3Q9Y6N6 1575 aa27.7■■■□□ 2.03
SGSM3-207ENST00000469719 CADPSQ9ULU8 1353 aa27.7■■■□□ 2.02
SGSM3-207ENST00000469719 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.01
SGSM3-207ENST00000469719 PDS5BQ9NTI5 1447 aa27.59■■■□□ 2.01
SGSM3-207ENST00000469719 CFTRP13569 1480 aa27.55■■■□□ 2
SGSM3-207ENST00000469719 ERCC6Q03468 1493 aa27.51■■□□□ 1.99
SGSM3-207ENST00000469719 NESP48681 1621 aa27.5■■□□□ 1.99
SGSM3-207ENST00000469719 FANCD2Q9BXW9 1451 aa27.31■■□□□ 1.96
SGSM3-207ENST00000469719 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
SGSM3-207ENST00000469719 CEP164Q9UPV0 1460 aa27.27■■□□□ 1.96
SGSM3-207ENST00000469719 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
SGSM3-207ENST00000469719 CUX2O14529 1486 aa27.17■■□□□ 1.94
SGSM3-207ENST00000469719 MRC2Q9UBG0 1479 aa27.17■■□□□ 1.94
SGSM3-207ENST00000469719 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
SGSM3-207ENST00000469719 THOC2Q8NI27 1593 aaKnown RBP27.06■■□□□ 1.92
SGSM3-207ENST00000469719 WDR62O43379 1518 aa27.02■■□□□ 1.92
SGSM3-207ENST00000469719 URB2Q14146 1524 aaKnown RBP26.92■■□□□ 1.9
SGSM3-207ENST00000469719 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
SGSM3-207ENST00000469719 TOPBP1Q92547 1522 aa26.87■■□□□ 1.89
SGSM3-207ENST00000469719 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.87
SGSM3-207ENST00000469719 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
SGSM3-207ENST00000469719 CUX1P39880 1505 aa26.7■■□□□ 1.86
SGSM3-207ENST00000469719 SOGA1O94964 1423 aa26.65■■□□□ 1.86
SGSM3-207ENST00000469719 POLA1P09884 1462 aaPredicted RBP26.64■■□□□ 1.86
SGSM3-207ENST00000469719 TOP2BQ02880 1626 aa26.62■■□□□ 1.85
SGSM3-207ENST00000469719 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
SGSM3-207ENST00000469719 BIVM-ERCC5R4GMW8 1640 aa26.58■■□□□ 1.85
SGSM3-207ENST00000469719 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
SGSM3-207ENST00000469719 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
SGSM3-207ENST00000469719 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
SGSM3-207ENST00000469719 RAD54L2Q9Y4B4 1467 aa26.47■■□□□ 1.83
SGSM3-207ENST00000469719 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
SGSM3-207ENST00000469719 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
SGSM3-207ENST00000469719 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
SGSM3-207ENST00000469719 TDRD9Q8NDG6 1382 aaKnown RBP26.37■■□□□ 1.81
SGSM3-207ENST00000469719 AQRO60306 1485 aaKnown RBP eCLIP26.35■■□□□ 1.815e-7■■■□□ 18.3
SGSM3-207ENST00000469719 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.8
SGSM3-207ENST00000469719 GAPVD1Q14C86 1478 aa26.31■■□□□ 1.8
SGSM3-207ENST00000469719 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
SGSM3-207ENST00000469719 KIF27Q86VH2 1401 aa26.26■■□□□ 1.79
SGSM3-207ENST00000469719 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
SGSM3-207ENST00000469719 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
SGSM3-207ENST00000469719 OSCARQ8IYS5 282 aa26.17■■□□□ 1.78
SGSM3-207ENST00000469719 ERICH3Q5RHP9 1530 aa26.17■■□□□ 1.78
SGSM3-207ENST00000469719 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
SGSM3-207ENST00000469719 CHMP7Q8WUX9 453 aaPredicted RBP26.15■■□□□ 1.78
SGSM3-207ENST00000469719 SNAPC4Q5SXM2 1469 aa26.11■■□□□ 1.77
SGSM3-207ENST00000469719 PBRM1Q86U86 1689 aa26.1■■□□□ 1.77
SGSM3-207ENST00000469719 FBLN2P98095 1184 aa26.1■■□□□ 1.77
SGSM3-207ENST00000469719 SYNJ2O15056 1496 aa26.09■■□□□ 1.77
SGSM3-207ENST00000469719 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
SGSM3-207ENST00000469719 IGF1RP08069 1367 aa26.05■■□□□ 1.76
SGSM3-207ENST00000469719 EEA1Q15075 1411 aa26.02■■□□□ 1.76
SGSM3-207ENST00000469719 DNAJC5Q9H3Z4 198 aa26.01■■□□□ 1.75
SGSM3-207ENST00000469719 CUL7Q14999 1698 aa25.96■■□□□ 1.75
SGSM3-207ENST00000469719 ADAMTS12P58397 1594 aa25.94■■□□□ 1.74
SGSM3-207ENST00000469719 CARMIL1Q5VZK9 1371 aa25.94■■□□□ 1.74
SGSM3-207ENST00000469719 GRIN2AQ12879 1464 aa25.91■■□□□ 1.74
SGSM3-207ENST00000469719 CHD1O14646 1710 aa25.9■■□□□ 1.74
SGSM3-207ENST00000469719 CSRNP3Q8WYN3 585 aa25.89■■□□□ 1.74
SGSM3-207ENST00000469719 RUSC2Q8N2Y8 1516 aa25.81■■□□□ 1.72
SGSM3-207ENST00000469719 RAPGEF2Q9Y4G8 1499 aa25.8■■□□□ 1.72
SGSM3-207ENST00000469719 NUP160Q12769 1436 aa25.79■■□□□ 1.72
SGSM3-207ENST00000469719 PRXQ9BXM0 1461 aa25.72■■□□□ 1.71
SGSM3-207ENST00000469719 CLASP1Q7Z460 1538 aa25.7■■□□□ 1.7
SGSM3-207ENST00000469719 KIAA0586Q9BVV6 1533 aa25.68■■□□□ 1.7
SGSM3-207ENST00000469719 FAM9AQ8IZU1 332 aaPredicted RBP25.66■■□□□ 1.7
SGSM3-207ENST00000469719 CEP170Q5SW79 1584 aa25.65■■□□□ 1.7
SGSM3-207ENST00000469719 JPH4Q96JJ6 628 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms