RNA–Protein interactions for RNA: ENST00000469672.5

ABCD4-205, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-205ENST00000469672 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
ABCD4-205ENST00000469672 CUL7Q14999 1698 aa22.27■■□□□ 1.16
ABCD4-205ENST00000469672 KIAA0586Q9BVV6 1533 aa22.26■■□□□ 1.15
ABCD4-205ENST00000469672 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
ABCD4-205ENST00000469672 NPM1P06748 294 aaKnown RBP eCLIP22.09■■□□□ 1.13
ABCD4-205ENST00000469672 RAPGEF2Q9Y4G8 1499 aa22.07■■□□□ 1.12
ABCD4-205ENST00000469672 CARMIL2Q6F5E8 1435 aa22.05■■□□□ 1.12
ABCD4-205ENST00000469672 PTPRGP23470 1445 aa22.04■■□□□ 1.12
ABCD4-205ENST00000469672 IQGAP2Q13576 1575 aa22.01■■□□□ 1.11
ABCD4-205ENST00000469672 TNIKQ9UKE5 1360 aa22■■□□□ 1.11
ABCD4-205ENST00000469672 ADCY10Q96PN6 1610 aa21.98■■□□□ 1.11
ABCD4-205ENST00000469672 MAPKBP1O60336 1514 aa21.96■■□□□ 1.11
ABCD4-205ENST00000469672 ABCC10Q5T3U5 1492 aa21.95■■□□□ 1.1
ABCD4-205ENST00000469672 FAM69CQ0P6D2 419 aa21.94■■□□□ 1.1
ABCD4-205ENST00000469672 DISP1Q96F81 1524 aa21.93■■□□□ 1.1
ABCD4-205ENST00000469672 UGGT2Q9NYU1 1516 aa21.92■■□□□ 1.1
ABCD4-205ENST00000469672 TTBK1Q5TCY1 1321 aaPredicted RBP21.92■■□□□ 1.1
ABCD4-205ENST00000469672 KIF13AQ9H1H9 1805 aa21.91■■□□□ 1.1
ABCD4-205ENST00000469672 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
ABCD4-205ENST00000469672 UHRF1BP1LA0JNW5 1464 aa21.86■■□□□ 1.09
ABCD4-205ENST00000469672 UACAQ9BZF9 1416 aa21.86■■□□□ 1.09
ABCD4-205ENST00000469672 ABCC2Q92887 1545 aa21.85■■□□□ 1.09
ABCD4-205ENST00000469672 CSRNP3Q8WYN3 585 aa21.83■■□□□ 1.09
ABCD4-205ENST00000469672 DIP2BQ9P265 1576 aa21.82■■□□□ 1.08
ABCD4-205ENST00000469672 KIAA0556O60303 1618 aa21.79■■□□□ 1.08
ABCD4-205ENST00000469672 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
ABCD4-205ENST00000469672 PLB1Q6P1J6 1458 aa21.77■■□□□ 1.08
ABCD4-205ENST00000469672 CTTNBP2Q8WZ74 1663 aa21.76■■□□□ 1.07
ABCD4-205ENST00000469672 ASXL2Q76L83 1435 aa21.76■■□□□ 1.07
ABCD4-205ENST00000469672 KDM5BQ9UGL1 1544 aa21.75■■□□□ 1.07
ABCD4-205ENST00000469672 EEA1Q15075 1411 aa21.73■■□□□ 1.07
ABCD4-205ENST00000469672 GLI2P10070 1586 aa21.68■■□□□ 1.06
ABCD4-205ENST00000469672 FAM9AQ8IZU1 332 aaPredicted RBP21.66■■□□□ 1.06
ABCD4-205ENST00000469672 AEBP2Q6ZN18 517 aaPredicted RBP21.65■■□□□ 1.06
ABCD4-205ENST00000469672 EPRSP07814 1512 aaKnown RBP21.63■■□□□ 1.05
ABCD4-205ENST00000469672 TSPOAP1O95153 1857 aa21.62■■□□□ 1.05
ABCD4-205ENST00000469672 ZCCHC11Q5TAX3 1644 aaKnown RBP21.62■■□□□ 1.05
ABCD4-205ENST00000469672 ABCA8O94911 1581 aa21.61■■□□□ 1.05
ABCD4-205ENST00000469672 P3H3Q8IVL6 736 aa21.6■■□□□ 1.05
ABCD4-205ENST00000469672 KDM6BO15054 1643 aa21.58■■□□□ 1.04
ABCD4-205ENST00000469672 WDR7Q9Y4E6 1490 aa21.58■■□□□ 1.04
ABCD4-205ENST00000469672 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
ABCD4-205ENST00000469672 PPRC1Q5VV67 1664 aaKnown RBP21.53■■□□□ 1.04
ABCD4-205ENST00000469672 SAMD9Q5K651 1589 aa21.52■■□□□ 1.04
ABCD4-205ENST00000469672 MAP3K4Q9Y6R4 1608 aa21.51■■□□□ 1.03
ABCD4-205ENST00000469672 KCNH8Q96L42 1107 aa21.51■■□□□ 1.03
ABCD4-205ENST00000469672 TEX14Q8IWB6 1497 aa21.5■■□□□ 1.03
ABCD4-205ENST00000469672 ATP10BO94823 1461 aa21.48■■□□□ 1.03
ABCD4-205ENST00000469672 KIF21BO75037 1637 aa21.47■■□□□ 1.03
ABCD4-205ENST00000469672 CD109Q6YHK3 1445 aa21.46■■□□□ 1.03
ABCD4-205ENST00000469672 RANGAP1P46060 587 aaPredicted RBP21.45■■□□□ 1.02
ABCD4-205ENST00000469672 COL17A1Q9UMD9 1497 aaPredicted RBP21.45■■□□□ 1.02
ABCD4-205ENST00000469672 ARID3CA6NKF2 412 aa21.44■■□□□ 1.02
ABCD4-205ENST00000469672 MAGI3Q5TCQ9 1506 aa21.43■■□□□ 1.02
ABCD4-205ENST00000469672 FHOD3Q2V2M9 1422 aa21.39■■□□□ 1.02
ABCD4-205ENST00000469672 KDM4FA0A1W2PPD8 638 aa21.39■■□□□ 1.01
ABCD4-205ENST00000469672 UBTFP17480 764 aaKnown RBP21.39■■□□□ 1.01
ABCD4-205ENST00000469672 CFAP43Q8NDM7 1665 aa21.39■■□□□ 1.01
ABCD4-205ENST00000469672 RAPGEF6Q8TEU7 1601 aa21.39■■□□□ 1.01
ABCD4-205ENST00000469672 EFCAB5A4FU69 1503 aa21.37■■□□□ 1.01
ABCD4-205ENST00000469672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.36■■□□□ 1.01
ABCD4-205ENST00000469672 HNRNPUL2Q1KMD3 747 aaKnown RBP21.36■■□□□ 1.01
ABCD4-205ENST00000469672 NUP153P49790 1475 aaKnown RBP21.35■■□□□ 1.01
ABCD4-205ENST00000469672 PLEKHD1A6NEE1 506 aa21.31■■□□□ 1
ABCD4-205ENST00000469672 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
ABCD4-205ENST00000469672 PHLDB1Q86UU1 1377 aa21.3■■□□□ 1
ABCD4-205ENST00000469672 ABCA9Q8IUA7 1624 aa21.28■■□□□ 1
ABCD4-205ENST00000469672 ARAP3Q8WWN8 1544 aa21.26■□□□□ 0.99
ABCD4-205ENST00000469672 FMN1Q68DA7 1419 aa21.21■□□□□ 0.99
ABCD4-205ENST00000469672 ARHGAP35Q9NRY4 1499 aa21.21■□□□□ 0.99
ABCD4-205ENST00000469672 NEO1Q92859 1461 aa21.2■□□□□ 0.98
ABCD4-205ENST00000469672 ADGRL1O94910 1474 aa21.19■□□□□ 0.98
ABCD4-205ENST00000469672 ATP1B4Q9UN42 357 aaPredicted RBP21.15■□□□□ 0.98
ABCD4-205ENST00000469672 RAPGEF3O95398 923 aa21.14■□□□□ 0.97
ABCD4-205ENST00000469672 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
ABCD4-205ENST00000469672 CDK13Q14004 1512 aaKnown RBP21.13■□□□□ 0.97
ABCD4-205ENST00000469672 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.11■□□□□ 0.97
ABCD4-205ENST00000469672 HECW1Q76N89 1606 aa21.08■□□□□ 0.97
ABCD4-205ENST00000469672 AKNAQ7Z591 1439 aa21.08■□□□□ 0.97
ABCD4-205ENST00000469672 FANCAO15360 1455 aa21.07■□□□□ 0.96
ABCD4-205ENST00000469672 DENND4BO75064 1496 aaPredicted RBP21.05■□□□□ 0.96
ABCD4-205ENST00000469672 PLCH2O75038 1416 aa21.04■□□□□ 0.96
ABCD4-205ENST00000469672 TTC37Q6PGP7 1564 aa21.03■□□□□ 0.96
ABCD4-205ENST00000469672 TROQ12816 1431 aaPredicted RBP21.01■□□□□ 0.95
ABCD4-205ENST00000469672 FRMPD1Q5SYB0 1578 aa21.01■□□□□ 0.95
ABCD4-205ENST00000469672 CFAP74Q9C0B2 1584 aa21.01■□□□□ 0.95
ABCD4-205ENST00000469672 EFCAB2Q5VUJ9 269 aa21■□□□□ 0.95
ABCD4-205ENST00000469672 CASKIN1Q8WXD9 1431 aa21■□□□□ 0.95
ABCD4-205ENST00000469672 CLIP1P30622 1438 aa20.96■□□□□ 0.95
ABCD4-205ENST00000469672 RICTORQ6R327 1708 aa20.95■□□□□ 0.94
ABCD4-205ENST00000469672 SCAPERQ9BY12 1400 aa20.95■□□□□ 0.94
ABCD4-205ENST00000469672 CCDC18Q5T9S5 1454 aa20.94■□□□□ 0.94
ABCD4-205ENST00000469672 ARID4BQ4LE39 1312 aaPredicted RBP20.93■□□□□ 0.94
ABCD4-205ENST00000469672 MAGI2Q86UL8 1455 aa20.92■□□□□ 0.94
ABCD4-205ENST00000469672 KIF14Q15058 1648 aa20.92■□□□□ 0.94
ABCD4-205ENST00000469672 ZMYM4Q5VZL5 1548 aa20.91■□□□□ 0.94
ABCD4-205ENST00000469672 LRRIQ1Q96JM4 1722 aa20.91■□□□□ 0.94
ABCD4-205ENST00000469672 PCF11O94913 1555 aaKnown RBP20.9■□□□□ 0.94
ABCD4-205ENST00000469672 FYCO1Q9BQS8 1478 aa20.9■□□□□ 0.94
ABCD4-205ENST00000469672 POGZQ7Z3K3 1410 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms