RNA–Protein interactions for RNA: ENST00000469672.5

ABCD4-205, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-205ENST00000469672 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
ABCD4-205ENST00000469672 CCDC180Q9P1Z9 1646 aa28.56■■■□□ 2.16
ABCD4-205ENST00000469672 ABCC9O60706 1549 aa28.38■■■□□ 2.13
ABCD4-205ENST00000469672 RB1CC1Q8TDY2 1594 aa27.12■■□□□ 1.93
ABCD4-205ENST00000469672 NACADO15069 1562 aa27.02■■□□□ 1.92
ABCD4-205ENST00000469672 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
ABCD4-205ENST00000469672 MYO15BQ96JP2 1530 aa26.76■■□□□ 1.87
ABCD4-205ENST00000469672 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
ABCD4-205ENST00000469672 PABPN1Q86U42 306 aaKnown RBP eCLIP26.51■■□□□ 1.83
ABCD4-205ENST00000469672 DNAJC5BQ9UF47 199 aa26.5■■□□□ 1.83
ABCD4-205ENST00000469672 DCAF1Q9Y4B6 1507 aa26.48■■□□□ 1.83
ABCD4-205ENST00000469672 UNC13AQ9UPW8 1703 aa26.41■■□□□ 1.82
ABCD4-205ENST00000469672 BICRAQ9NZM4 1560 aa26.31■■□□□ 1.8
ABCD4-205ENST00000469672 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
ABCD4-205ENST00000469672 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
ABCD4-205ENST00000469672 EIF4G1Q04637 1599 aaKnown RBP25.65■■□□□ 1.7
ABCD4-205ENST00000469672 CC2D2AQ9P2K1 1620 aa25.63■■□□□ 1.69
ABCD4-205ENST00000469672 CECR2Q9BXF3 1484 aa25.57■■□□□ 1.68
ABCD4-205ENST00000469672 NCAPD3P42695 1498 aa24.98■■□□□ 1.59
ABCD4-205ENST00000469672 ATAD2BQ9ULI0 1458 aa24.9■■□□□ 1.58
ABCD4-205ENST00000469672 SMARCA4P51532 1647 aa24.87■■□□□ 1.57
ABCD4-205ENST00000469672 SMARCA2P51531 1590 aa24.83■■□□□ 1.57
ABCD4-205ENST00000469672 BAZ1AQ9NRL2 1556 aaPredicted RBP24.82■■□□□ 1.56
ABCD4-205ENST00000469672 HMGXB3Q12766 1538 aa24.75■■□□□ 1.55
ABCD4-205ENST00000469672 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
ABCD4-205ENST00000469672 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.54
ABCD4-205ENST00000469672 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.54
ABCD4-205ENST00000469672 ERCC6Q03468 1493 aa24.49■■□□□ 1.51
ABCD4-205ENST00000469672 NESP48681 1621 aa24.43■■□□□ 1.5
ABCD4-205ENST00000469672 CUX2O14529 1486 aa24.41■■□□□ 1.5
ABCD4-205ENST00000469672 LAMC3Q9Y6N6 1575 aa24.32■■□□□ 1.48
ABCD4-205ENST00000469672 WIZO95785 1651 aa24.31■■□□□ 1.48
ABCD4-205ENST00000469672 RSF1Q96T23 1441 aaPredicted RBP24.26■■□□□ 1.47
ABCD4-205ENST00000469672 CADPSQ9ULU8 1353 aa24.23■■□□□ 1.47
ABCD4-205ENST00000469672 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
ABCD4-205ENST00000469672 DNAJC5Q9H3Z4 198 aa24.22■■□□□ 1.47
ABCD4-205ENST00000469672 THOC2Q8NI27 1593 aaKnown RBP24.11■■□□□ 1.45
ABCD4-205ENST00000469672 KIF21AQ7Z4S6 1674 aa24.06■■□□□ 1.44
ABCD4-205ENST00000469672 TOP2AP11388 1531 aaKnown RBP24.05■■□□□ 1.44
ABCD4-205ENST00000469672 CFTRP13569 1480 aa23.98■■□□□ 1.43
ABCD4-205ENST00000469672 MRC2Q9UBG0 1479 aa23.95■■□□□ 1.42
ABCD4-205ENST00000469672 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
ABCD4-205ENST00000469672 CEP164Q9UPV0 1460 aa23.9■■□□□ 1.42
ABCD4-205ENST00000469672 WDR62O43379 1518 aa23.87■■□□□ 1.41
ABCD4-205ENST00000469672 CCDC88BA6NC98 1476 aa23.81■■□□□ 1.4
ABCD4-205ENST00000469672 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
ABCD4-205ENST00000469672 PRDM2Q13029 1718 aa23.62■■□□□ 1.37
ABCD4-205ENST00000469672 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
ABCD4-205ENST00000469672 TOPBP1Q92547 1522 aa23.47■■□□□ 1.35
ABCD4-205ENST00000469672 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
ABCD4-205ENST00000469672 OSCARQ8IYS5 282 aa23.4■■□□□ 1.34
ABCD4-205ENST00000469672 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
ABCD4-205ENST00000469672 ZNF608Q9ULD9 1512 aaPredicted RBP23.34■■□□□ 1.33
ABCD4-205ENST00000469672 SUPT5HO00267 1087 aaKnown RBP23.34■■□□□ 1.33
ABCD4-205ENST00000469672 POLA1P09884 1462 aaPredicted RBP23.24■■□□□ 1.31
ABCD4-205ENST00000469672 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
ABCD4-205ENST00000469672 AQRO60306 1485 aaKnown RBP eCLIP23.19■■□□□ 1.37e-8■■■■■ 31.3
ABCD4-205ENST00000469672 SOGA1O94964 1423 aa23.19■■□□□ 1.3
ABCD4-205ENST00000469672 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
ABCD4-205ENST00000469672 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
ABCD4-205ENST00000469672 RAD54L2Q9Y4B4 1467 aa23.15■■□□□ 1.3
ABCD4-205ENST00000469672 CUX1P39880 1505 aa23.13■■□□□ 1.29
ABCD4-205ENST00000469672 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
ABCD4-205ENST00000469672 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
ABCD4-205ENST00000469672 WDR97A6NE52 1622 aa23.03■■□□□ 1.28
ABCD4-205ENST00000469672 FBLN2P98095 1184 aa23.01■■□□□ 1.27
ABCD4-205ENST00000469672 GRIN2BQ13224 1484 aa22.94■■□□□ 1.26
ABCD4-205ENST00000469672 CHD1O14646 1710 aa22.94■■□□□ 1.26
ABCD4-205ENST00000469672 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
ABCD4-205ENST00000469672 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
ABCD4-205ENST00000469672 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
ABCD4-205ENST00000469672 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
ABCD4-205ENST00000469672 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
ABCD4-205ENST00000469672 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
ABCD4-205ENST00000469672 CHMP7Q8WUX9 453 aaPredicted RBP22.91■■□□□ 1.26
ABCD4-205ENST00000469672 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
ABCD4-205ENST00000469672 GAPVD1Q14C86 1478 aa22.88■■□□□ 1.25
ABCD4-205ENST00000469672 WRNQ14191 1432 aaPredicted RBP eCLIP22.88■■□□□ 1.25
ABCD4-205ENST00000469672 SYNJ2O15056 1496 aa22.83■■□□□ 1.25
ABCD4-205ENST00000469672 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
ABCD4-205ENST00000469672 CYB5RLQ6IPT4 315 aa22.81■■□□□ 1.24
ABCD4-205ENST00000469672 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
ABCD4-205ENST00000469672 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
ABCD4-205ENST00000469672 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
ABCD4-205ENST00000469672 PBRM1Q86U86 1689 aa22.75■■□□□ 1.23
ABCD4-205ENST00000469672 CLASP1Q7Z460 1538 aa22.75■■□□□ 1.23
ABCD4-205ENST00000469672 ARAP1Q96P48 1450 aa22.71■■□□□ 1.23
ABCD4-205ENST00000469672 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
ABCD4-205ENST00000469672 FHAD1B1AJZ9 1412 aa22.63■■□□□ 1.21
ABCD4-205ENST00000469672 ERICH3Q5RHP9 1530 aa22.61■■□□□ 1.21
ABCD4-205ENST00000469672 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
ABCD4-205ENST00000469672 NUP160Q12769 1436 aa22.57■■□□□ 1.2
ABCD4-205ENST00000469672 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
ABCD4-205ENST00000469672 TRHP20396 242 aaPredicted RBP22.46■■□□□ 1.19
ABCD4-205ENST00000469672 IGF1RP08069 1367 aa22.44■■□□□ 1.18
ABCD4-205ENST00000469672 KIF27Q86VH2 1401 aa22.44■■□□□ 1.18
ABCD4-205ENST00000469672 JPH4Q96JJ6 628 aa22.4■■□□□ 1.18
ABCD4-205ENST00000469672 SHROOM2Q13796 1616 aa22.39■■□□□ 1.18
ABCD4-205ENST00000469672 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
ABCD4-205ENST00000469672 PRG4Q92954 1404 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms