RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 KIAA0586Q9BVV6 1533 aa16.43■□□□□ 0.22
SRRT-208ENST00000469602 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
SRRT-208ENST00000469602 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
SRRT-208ENST00000469602 PRG4Q92954 1404 aaPredicted RBP16.39■□□□□ 0.21
SRRT-208ENST00000469602 CHIC1Q5VXU3 224 aa16.36■□□□□ 0.21
SRRT-208ENST00000469602 PRXQ9BXM0 1461 aa16.35■□□□□ 0.21
SRRT-208ENST00000469602 IQGAP2Q13576 1575 aa16.35■□□□□ 0.21
SRRT-208ENST00000469602 EEA1Q15075 1411 aa16.34■□□□□ 0.21
SRRT-208ENST00000469602 CTTNBP2Q8WZ74 1663 aa16.31■□□□□ 0.2
SRRT-208ENST00000469602 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
SRRT-208ENST00000469602 UGGT2Q9NYU1 1516 aa16.25■□□□□ 0.19
SRRT-208ENST00000469602 CARMIL2Q6F5E8 1435 aa16.25■□□□□ 0.19
SRRT-208ENST00000469602 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
SRRT-208ENST00000469602 DISP1Q96F81 1524 aa16.23■□□□□ 0.19
SRRT-208ENST00000469602 TNIKQ9UKE5 1360 aa16.2■□□□□ 0.18
SRRT-208ENST00000469602 KIAA0556O60303 1618 aa16.19■□□□□ 0.18
SRRT-208ENST00000469602 KIF21BO75037 1637 aa16.19■□□□□ 0.18
SRRT-208ENST00000469602 ADCY10Q96PN6 1610 aa16.19■□□□□ 0.18
SRRT-208ENST00000469602 PTPRGP23470 1445 aa16.19■□□□□ 0.18
SRRT-208ENST00000469602 TRHP20396 242 aaPredicted RBP16.16■□□□□ 0.18
SRRT-208ENST00000469602 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
SRRT-208ENST00000469602 TTBK1Q5TCY1 1321 aaPredicted RBP16.14■□□□□ 0.17
SRRT-208ENST00000469602 NPM1P06748 294 aaKnown RBP eCLIP16.1■□□□□ 0.17
SRRT-208ENST00000469602 UACAQ9BZF9 1416 aa16.09■□□□□ 0.17
SRRT-208ENST00000469602 UHRF1BP1LA0JNW5 1464 aa16.09■□□□□ 0.17
SRRT-208ENST00000469602 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
SRRT-208ENST00000469602 MAPKBP1O60336 1514 aa16.08■□□□□ 0.16
SRRT-208ENST00000469602 ABCC2Q92887 1545 aa16.07■□□□□ 0.16
SRRT-208ENST00000469602 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
SRRT-208ENST00000469602 ABCA8O94911 1581 aa16.02■□□□□ 0.16
SRRT-208ENST00000469602 UBTFP17480 764 aaKnown RBP16.02■□□□□ 0.16
SRRT-208ENST00000469602 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.16
SRRT-208ENST00000469602 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.15
SRRT-208ENST00000469602 KDM5BQ9UGL1 1544 aa16.01■□□□□ 0.15
SRRT-208ENST00000469602 P3H3Q8IVL6 736 aa16.01■□□□□ 0.15
SRRT-208ENST00000469602 EFCAB5A4FU69 1503 aa16■□□□□ 0.15
SRRT-208ENST00000469602 ABCC10Q5T3U5 1492 aa16■□□□□ 0.15
SRRT-208ENST00000469602 RANGAP1P46060 587 aaPredicted RBP16■□□□□ 0.15
SRRT-208ENST00000469602 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
SRRT-208ENST00000469602 DIP2BQ9P265 1576 aa15.99■□□□□ 0.15
SRRT-208ENST00000469602 ASXL2Q76L83 1435 aa15.96■□□□□ 0.15
SRRT-208ENST00000469602 FHOD3Q2V2M9 1422 aa15.95■□□□□ 0.14
SRRT-208ENST00000469602 FAM69CQ0P6D2 419 aa15.94■□□□□ 0.14
SRRT-208ENST00000469602 RAPGEF6Q8TEU7 1601 aa15.93■□□□□ 0.14
SRRT-208ENST00000469602 GLI2P10070 1586 aa15.89■□□□□ 0.13
SRRT-208ENST00000469602 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
SRRT-208ENST00000469602 WDR7Q9Y4E6 1490 aa15.89■□□□□ 0.13
SRRT-208ENST00000469602 TSPOAP1O95153 1857 aa15.88■□□□□ 0.13
SRRT-208ENST00000469602 EPRSP07814 1512 aaKnown RBP15.88■□□□□ 0.13
SRRT-208ENST00000469602 ATP10BO94823 1461 aa15.86■□□□□ 0.13
SRRT-208ENST00000469602 NUP153P49790 1475 aaKnown RBP15.85■□□□□ 0.13
SRRT-208ENST00000469602 ARID3CA6NKF2 412 aa15.84■□□□□ 0.13
SRRT-208ENST00000469602 MAP3K4Q9Y6R4 1608 aa15.83■□□□□ 0.13
SRRT-208ENST00000469602 FMN1Q68DA7 1419 aa15.83■□□□□ 0.12
SRRT-208ENST00000469602 PPRC1Q5VV67 1664 aaKnown RBP15.81■□□□□ 0.12
SRRT-208ENST00000469602 CFAP43Q8NDM7 1665 aa15.79■□□□□ 0.12
SRRT-208ENST00000469602 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
SRRT-208ENST00000469602 KCNH8Q96L42 1107 aa15.78■□□□□ 0.12
SRRT-208ENST00000469602 CLIP1P30622 1438 aa15.77■□□□□ 0.12
SRRT-208ENST00000469602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.77■□□□□ 0.12
SRRT-208ENST00000469602 HNRNPUL2Q1KMD3 747 aaKnown RBP15.77■□□□□ 0.12
SRRT-208ENST00000469602 CDK13Q14004 1512 aaKnown RBP15.74■□□□□ 0.11
SRRT-208ENST00000469602 TEX14Q8IWB6 1497 aa15.74■□□□□ 0.11
SRRT-208ENST00000469602 KDM6BO15054 1643 aa15.74■□□□□ 0.11
SRRT-208ENST00000469602 ABCA9Q8IUA7 1624 aa15.73■□□□□ 0.11
SRRT-208ENST00000469602 CD109Q6YHK3 1445 aa15.73■□□□□ 0.11
SRRT-208ENST00000469602 LRRIQ1Q96JM4 1722 aa15.72■□□□□ 0.11
SRRT-208ENST00000469602 PCF11O94913 1555 aaKnown RBP15.72■□□□□ 0.11
SRRT-208ENST00000469602 MAGI3Q5TCQ9 1506 aa15.72■□□□□ 0.11
SRRT-208ENST00000469602 PLEKHD1A6NEE1 506 aa15.71■□□□□ 0.11
SRRT-208ENST00000469602 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.11
SRRT-208ENST00000469602 CEP162Q5TB80 1403 aa15.7■□□□□ 0.1
SRRT-208ENST00000469602 CASKIN1Q8WXD9 1431 aa15.7■□□□□ 0.1
SRRT-208ENST00000469602 LOC105371045A0A1W2PR82 267 aa15.69■□□□□ 0.1
SRRT-208ENST00000469602 FYCO1Q9BQS8 1478 aa15.68■□□□□ 0.1
SRRT-208ENST00000469602 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
SRRT-208ENST00000469602 CDK11AQ9UQ88 783 aaPredicted RBP15.65■□□□□ 0.1
SRRT-208ENST00000469602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.64■□□□□ 0.095e-6■■■■□ 19.7
SRRT-208ENST00000469602 COL17A1Q9UMD9 1497 aaPredicted RBP15.64■□□□□ 0.09
SRRT-208ENST00000469602 TTC37Q6PGP7 1564 aa15.63■□□□□ 0.09
SRRT-208ENST00000469602 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
SRRT-208ENST00000469602 KIF14Q15058 1648 aa15.6■□□□□ 0.09
SRRT-208ENST00000469602 NEO1Q92859 1461 aa15.59■□□□□ 0.09
SRRT-208ENST00000469602 PHLDB1Q86UU1 1377 aa15.59■□□□□ 0.09
SRRT-208ENST00000469602 ARAP3Q8WWN8 1544 aa15.58■□□□□ 0.09
SRRT-208ENST00000469602 CFAP74Q9C0B2 1584 aa15.58■□□□□ 0.08
SRRT-208ENST00000469602 MYO5CQ9NQX4 1742 aa15.57■□□□□ 0.08
SRRT-208ENST00000469602 FANCAO15360 1455 aa15.55■□□□□ 0.08
SRRT-208ENST00000469602 PLCH2O75038 1416 aa15.53■□□□□ 0.08
SRRT-208ENST00000469602 VPS8Q8N3P4 1428 aa15.52■□□□□ 0.08
SRRT-208ENST00000469602 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
SRRT-208ENST00000469602 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
SRRT-208ENST00000469602 CDC42BPBQ9Y5S2 1711 aa15.49■□□□□ 0.07
SRRT-208ENST00000469602 PREX2Q70Z35 1606 aa15.49■□□□□ 0.07
SRRT-208ENST00000469602 RICTORQ6R327 1708 aa15.48■□□□□ 0.07
SRRT-208ENST00000469602 CDC42BPAQ5VT25 1732 aa15.48■□□□□ 0.07
SRRT-208ENST00000469602 ARHGAP5Q13017 1502 aa15.48■□□□□ 0.07
SRRT-208ENST00000469602 RAPGEF3O95398 923 aa15.47■□□□□ 0.07
SRRT-208ENST00000469602 EFCAB2Q5VUJ9 269 aa15.47■□□□□ 0.07
SRRT-208ENST00000469602 MTUS2Q5JR59 1369 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms