RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 ABCC10Q5T3U5 1492 aa32.92■■■□□ 2.86
USP11-205ENST00000467378 JPH4Q96JJ6 628 aa32.91■■■□□ 2.86
USP11-205ENST00000467378 NPM1P06748 294 aaKnown RBP eCLIP32.9■■■□□ 2.86
USP11-205ENST00000467378 DIP2BQ9P265 1576 aa32.86■■■□□ 2.85
USP11-205ENST00000467378 MAPKBP1O60336 1514 aa32.84■■■□□ 2.85
USP11-205ENST00000467378 KDM6BO15054 1643 aa32.84■■■□□ 2.85
USP11-205ENST00000467378 TSPOAP1O95153 1857 aa32.82■■■□□ 2.85
USP11-205ENST00000467378 RUSC2Q8N2Y8 1516 aa32.8■■■□□ 2.84
USP11-205ENST00000467378 KDM4FA0A1W2PPD8 638 aa32.78■■■□□ 2.84
USP11-205ENST00000467378 ADCY10Q96PN6 1610 aa32.77■■■□□ 2.84
USP11-205ENST00000467378 ILDR1Q86SU0 546 aaPredicted RBP32.67■■■□□ 2.82
USP11-205ENST00000467378 KIAA0586Q9BVV6 1533 aa32.5■■■□□ 2.79
USP11-205ENST00000467378 TTBK1Q5TCY1 1321 aaPredicted RBP32.41■■■□□ 2.78
USP11-205ENST00000467378 PPRC1Q5VV67 1664 aaKnown RBP32.38■■■□□ 2.77
USP11-205ENST00000467378 PTPRGP23470 1445 aa32.38■■■□□ 2.77
USP11-205ENST00000467378 CUL7Q14999 1698 aa32.37■■■□□ 2.77
USP11-205ENST00000467378 ADGRL1O94910 1474 aa32.37■■■□□ 2.77
USP11-205ENST00000467378 ABCC2Q92887 1545 aa32.31■■■□□ 2.76
USP11-205ENST00000467378 GLI2P10070 1586 aa32.3■■■□□ 2.76
USP11-205ENST00000467378 CHIC1Q5VXU3 224 aa32.3■■■□□ 2.76
USP11-205ENST00000467378 IGF1RP08069 1367 aa32.3■■■□□ 2.76
USP11-205ENST00000467378 ASXL2Q76L83 1435 aa32.29■■■□□ 2.76
USP11-205ENST00000467378 PLB1Q6P1J6 1458 aa32.28■■■□□ 2.76
USP11-205ENST00000467378 KIF27Q86VH2 1401 aa32.26■■■□□ 2.76
USP11-205ENST00000467378 TNIKQ9UKE5 1360 aa32.24■■■□□ 2.75
USP11-205ENST00000467378 CARMIL2Q6F5E8 1435 aa32.24■■■□□ 2.75
USP11-205ENST00000467378 HECW2Q9P2P5 1572 aa32.22■■■□□ 2.75
USP11-205ENST00000467378 COL17A1Q9UMD9 1497 aaPredicted RBP32.15■■■□□ 2.74
USP11-205ENST00000467378 MAP3K4Q9Y6R4 1608 aa32.14■■■□□ 2.74
USP11-205ENST00000467378 UHRF1BP1LA0JNW5 1464 aa32.13■■■□□ 2.73
USP11-205ENST00000467378 IQGAP2Q13576 1575 aa32.12■■■□□ 2.73
USP11-205ENST00000467378 UACAQ9BZF9 1416 aa32.1■■■□□ 2.73
USP11-205ENST00000467378 CARMIL1Q5VZK9 1371 aa32.1■■■□□ 2.73
USP11-205ENST00000467378 EPRSP07814 1512 aaKnown RBP32.09■■■□□ 2.73
USP11-205ENST00000467378 TEX14Q8IWB6 1497 aa32.08■■■□□ 2.73
USP11-205ENST00000467378 ZCCHC11Q5TAX3 1644 aaKnown RBP32.04■■■□□ 2.72
USP11-205ENST00000467378 KDM5BQ9UGL1 1544 aa32■■■□□ 2.71
USP11-205ENST00000467378 DISP1Q96F81 1524 aa31.98■■■□□ 2.71
USP11-205ENST00000467378 EEA1Q15075 1411 aa31.87■■■□□ 2.69
USP11-205ENST00000467378 KIAA0556O60303 1618 aa31.84■■■□□ 2.69
USP11-205ENST00000467378 UGGT2Q9NYU1 1516 aa31.84■■■□□ 2.69
USP11-205ENST00000467378 WDR7Q9Y4E6 1490 aa31.84■■■□□ 2.69
USP11-205ENST00000467378 CSRNP3Q8WYN3 585 aa31.81■■■□□ 2.68
USP11-205ENST00000467378 CFAP43Q8NDM7 1665 aa31.8■■■□□ 2.68
USP11-205ENST00000467378 RAPGEF2Q9Y4G8 1499 aa31.78■■■□□ 2.68
USP11-205ENST00000467378 KIF21BO75037 1637 aa31.77■■■□□ 2.68
USP11-205ENST00000467378 PRXQ9BXM0 1461 aa31.77■■■□□ 2.68
USP11-205ENST00000467378 FAM9AQ8IZU1 332 aaPredicted RBP31.75■■■□□ 2.67
USP11-205ENST00000467378 CD109Q6YHK3 1445 aa31.75■■■□□ 2.67
USP11-205ENST00000467378 FBXO41Q8TF61 875 aa31.74■■■□□ 2.67
USP11-205ENST00000467378 MAGI3Q5TCQ9 1506 aa31.73■■■□□ 2.67
USP11-205ENST00000467378 KCNH8Q96L42 1107 aa31.71■■■□□ 2.67
USP11-205ENST00000467378 CTTNBP2Q8WZ74 1663 aa31.64■■■□□ 2.66
USP11-205ENST00000467378 ABCA8O94911 1581 aa31.58■■■□□ 2.65
USP11-205ENST00000467378 GOLGA3Q08378 1498 aa31.53■■■□□ 2.64
USP11-205ENST00000467378 ARAP3Q8WWN8 1544 aa31.51■■■□□ 2.63
USP11-205ENST00000467378 ADAMTSL3P82987 1691 aa31.51■■■□□ 2.63
USP11-205ENST00000467378 PTPRMP28827 1452 aa31.5■■■□□ 2.63
USP11-205ENST00000467378 ARID3CA6NKF2 412 aa31.39■■■□□ 2.62
USP11-205ENST00000467378 BCORL1Q5H9F3 1711 aa31.38■■■□□ 2.61
USP11-205ENST00000467378 ABCA9Q8IUA7 1624 aa31.35■■■□□ 2.61
USP11-205ENST00000467378 MADDQ8WXG6 1647 aa31.35■■■□□ 2.61
USP11-205ENST00000467378 PCF11O94913 1555 aaKnown RBP31.35■■■□□ 2.61
USP11-205ENST00000467378 PHLDB1Q86UU1 1377 aa31.33■■■□□ 2.61
USP11-205ENST00000467378 RAPGEF3O95398 923 aa31.33■■■□□ 2.61
USP11-205ENST00000467378 ARID4BQ4LE39 1312 aaPredicted RBP31.31■■■□□ 2.6
USP11-205ENST00000467378 ATP10BO94823 1461 aa31.3■■■□□ 2.6
USP11-205ENST00000467378 EHMT2Q96KQ7 1210 aa31.3■■■□□ 2.6
USP11-205ENST00000467378 LMTK3Q96Q04 1460 aa31.28■■■□□ 2.6
USP11-205ENST00000467378 RIMS1Q86UR5 1692 aaKnown RBP31.26■■■□□ 2.6
USP11-205ENST00000467378 NEO1Q92859 1461 aa31.24■■■□□ 2.59
USP11-205ENST00000467378 FRMPD1Q5SYB0 1578 aa31.24■■■□□ 2.59
USP11-205ENST00000467378 UBTFP17480 764 aaKnown RBP31.23■■■□□ 2.59
USP11-205ENST00000467378 P3H3Q8IVL6 736 aa31.23■■■□□ 2.59
USP11-205ENST00000467378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.14■■■□□ 2.58
USP11-205ENST00000467378 HNRNPUL2Q1KMD3 747 aaKnown RBP31.14■■■□□ 2.58
USP11-205ENST00000467378 RAPGEF6Q8TEU7 1601 aa31.13■■■□□ 2.57
USP11-205ENST00000467378 HSPA2P54652 639 aa31.13■■■□□ 2.57
USP11-205ENST00000467378 PLPPR3Q6T4P5 718 aa31.13■■■□□ 2.57
USP11-205ENST00000467378 ARHGEF40Q8TER5 1519 aa31.13■■■□□ 2.57
USP11-205ENST00000467378 SAMD9Q5K651 1589 aa31.12■■■□□ 2.57
USP11-205ENST00000467378 RICTORQ6R327 1708 aa31.09■■■□□ 2.57
USP11-205ENST00000467378 RANGAP1P46060 587 aaPredicted RBP31.05■■■□□ 2.56
USP11-205ENST00000467378 CERKQ8TCT0 537 aa31.04■■■□□ 2.56
USP11-205ENST00000467378 DENND4BO75064 1496 aaPredicted RBP31.03■■■□□ 2.56
USP11-205ENST00000467378 POGZQ7Z3K3 1410 aa31■■■□□ 2.55
USP11-205ENST00000467378 EFCAB5A4FU69 1503 aa31■■■□□ 2.55
USP11-205ENST00000467378 FANCAO15360 1455 aa30.99■■■□□ 2.55
USP11-205ENST00000467378 CFAP74Q9C0B2 1584 aa30.99■■■□□ 2.55
USP11-205ENST00000467378 LOC105371045A0A1W2PR82 267 aa30.98■■■□□ 2.55
USP11-205ENST00000467378 AKNAQ7Z591 1439 aa30.97■■■□□ 2.55
USP11-205ENST00000467378 FER1L4A9Z1Z3 1794 aa30.97■■■□□ 2.55
USP11-205ENST00000467378 SIGLEC1Q9BZZ2 1709 aa30.96■■■□□ 2.55
USP11-205ENST00000467378 NUP153P49790 1475 aaKnown RBP30.95■■■□□ 2.54
USP11-205ENST00000467378 FHOD3Q2V2M9 1422 aa30.94■■■□□ 2.54
USP11-205ENST00000467378 ZFYVE16Q7Z3T8 1539 aa30.92■■■□□ 2.54
USP11-205ENST00000467378 ARHGAP35Q9NRY4 1499 aa30.91■■■□□ 2.54
USP11-205ENST00000467378 MLECQ14165 292 aa30.91■■■□□ 2.54
USP11-205ENST00000467378 ZMYM4Q5VZL5 1548 aa30.9■■■□□ 2.54
USP11-205ENST00000467378 PLEKHD1A6NEE1 506 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms