RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 IQGAP2Q13576 1575 aa26.66■■□□□ 1.86
HLA-C-205ENST00000466892 SHROOM2Q13796 1616 aa26.63■■□□□ 1.85
HLA-C-205ENST00000466892 CTTNBP2Q8WZ74 1663 aa26.61■■□□□ 1.85
HLA-C-205ENST00000466892 JPH4Q96JJ6 628 aa26.61■■□□□ 1.85
HLA-C-205ENST00000466892 DNAJC5Q9H3Z4 198 aa26.61■■□□□ 1.85
HLA-C-205ENST00000466892 UBTFP17480 764 aaKnown RBP26.59■■□□□ 1.85
HLA-C-205ENST00000466892 UGGT2Q9NYU1 1516 aa26.57■■□□□ 1.84
HLA-C-205ENST00000466892 TNIKQ9UKE5 1360 aa26.54■■□□□ 1.84
HLA-C-205ENST00000466892 PRG4Q92954 1404 aaPredicted RBP26.52■■□□□ 1.84
HLA-C-205ENST00000466892 CARMIL2Q6F5E8 1435 aa26.51■■□□□ 1.83
HLA-C-205ENST00000466892 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
HLA-C-205ENST00000466892 EHMT2Q96KQ7 1210 aa26.45■■□□□ 1.82
HLA-C-205ENST00000466892 DISP1Q96F81 1524 aa26.44■■□□□ 1.82
HLA-C-205ENST00000466892 EFCAB5A4FU69 1503 aa26.42■■□□□ 1.82
HLA-C-205ENST00000466892 RIMBP3CA6NJZ7 1639 aa26.39■■□□□ 1.81
HLA-C-205ENST00000466892 RIMBP3BA6NNM3 1639 aa26.39■■□□□ 1.81
HLA-C-205ENST00000466892 KIAA0556O60303 1618 aa26.39■■□□□ 1.81
HLA-C-205ENST00000466892 RIMBP3Q9UFD9 1639 aa26.39■■□□□ 1.81
HLA-C-205ENST00000466892 SAMD9Q5K651 1589 aa26.38■■□□□ 1.81
HLA-C-205ENST00000466892 LOC105371045A0A1W2PR82 267 aa26.37■■□□□ 1.81
HLA-C-205ENST00000466892 ERCC6L2Q5T890 1561 aa26.36■■□□□ 1.81
HLA-C-205ENST00000466892 ARAP1Q96P48 1450 aa26.3■■□□□ 1.8
HLA-C-205ENST00000466892 PTPRGP23470 1445 aa26.29■■□□□ 1.8
HLA-C-205ENST00000466892 CLIP1P30622 1438 aa26.29■■□□□ 1.8
HLA-C-205ENST00000466892 CEP162Q5TB80 1403 aa26.27■■□□□ 1.8
HLA-C-205ENST00000466892 ARHGAP35Q9NRY4 1499 aa26.27■■□□□ 1.8
HLA-C-205ENST00000466892 RANGAP1P46060 587 aaPredicted RBP26.24■■□□□ 1.79
HLA-C-205ENST00000466892 FHOD3Q2V2M9 1422 aa26.19■■□□□ 1.78
HLA-C-205ENST00000466892 FMN1Q68DA7 1419 aa26.18■■□□□ 1.78
HLA-C-205ENST00000466892 CYB5RLQ6IPT4 315 aa26.17■■□□□ 1.78
HLA-C-205ENST00000466892 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
HLA-C-205ENST00000466892 UACAQ9BZF9 1416 aa26.14■■□□□ 1.78
HLA-C-205ENST00000466892 UHRF1BP1LA0JNW5 1464 aa26.14■■□□□ 1.78
HLA-C-205ENST00000466892 ABCC2Q92887 1545 aa26.09■■□□□ 1.77
HLA-C-205ENST00000466892 ABCA8O94911 1581 aa26.08■■□□□ 1.77
HLA-C-205ENST00000466892 PLB1Q6P1J6 1458 aa26.06■■□□□ 1.76
HLA-C-205ENST00000466892 TTBK1Q5TCY1 1321 aaPredicted RBP26.06■■□□□ 1.76
HLA-C-205ENST00000466892 RAPGEF6Q8TEU7 1601 aa26.01■■□□□ 1.75
HLA-C-205ENST00000466892 ADCY10Q96PN6 1610 aa26.01■■□□□ 1.75
HLA-C-205ENST00000466892 CASKIN1Q8WXD9 1431 aa25.99■■□□□ 1.75
HLA-C-205ENST00000466892 KDM5BQ9UGL1 1544 aa25.98■■□□□ 1.75
HLA-C-205ENST00000466892 VPS8Q8N3P4 1428 aa25.97■■□□□ 1.75
HLA-C-205ENST00000466892 NPM1P06748 294 aaKnown RBP eCLIP25.96■■□□□ 1.75
HLA-C-205ENST00000466892 FYCO1Q9BQS8 1478 aa25.96■■□□□ 1.75
HLA-C-205ENST00000466892 NUP153P49790 1475 aaKnown RBP25.94■■□□□ 1.74
HLA-C-205ENST00000466892 HECW1Q76N89 1606 aa25.94■■□□□ 1.74
HLA-C-205ENST00000466892 PCF11O94913 1555 aaKnown RBP25.89■■□□□ 1.73
HLA-C-205ENST00000466892 CCDC18Q5T9S5 1454 aa25.87■■□□□ 1.73
HLA-C-205ENST00000466892 MAPKBP1O60336 1514 aa25.87■■□□□ 1.73
HLA-C-205ENST00000466892 ATP10BO94823 1461 aa25.86■■□□□ 1.73
HLA-C-205ENST00000466892 EPRSP07814 1512 aaKnown RBP25.85■■□□□ 1.73
HLA-C-205ENST00000466892 ZCCHC11Q5TAX3 1644 aaKnown RBP25.82■■□□□ 1.72
HLA-C-205ENST00000466892 ATP1B4Q9UN42 357 aaPredicted RBP25.79■■□□□ 1.72
HLA-C-205ENST00000466892 CDK11AQ9UQ88 783 aaPredicted RBP25.78■■□□□ 1.72
HLA-C-205ENST00000466892 ASXL2Q76L83 1435 aa25.77■■□□□ 1.72
HLA-C-205ENST00000466892 MAP3K1Q13233 1512 aa25.75■■□□□ 1.71
HLA-C-205ENST00000466892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.75■■□□□ 1.71
HLA-C-205ENST00000466892 HNRNPUL2Q1KMD3 747 aaKnown RBP25.75■■□□□ 1.71
HLA-C-205ENST00000466892 WDR7Q9Y4E6 1490 aa25.74■■□□□ 1.71
HLA-C-205ENST00000466892 CDK13Q14004 1512 aaKnown RBP25.73■■□□□ 1.71
HLA-C-205ENST00000466892 PLEKHD1A6NEE1 506 aa25.72■■□□□ 1.71
HLA-C-205ENST00000466892 ARID3CA6NKF2 412 aa25.71■■□□□ 1.71
HLA-C-205ENST00000466892 ABCC10Q5T3U5 1492 aa25.66■■□□□ 1.7
HLA-C-205ENST00000466892 APLP2Q06481 763 aa25.66■■□□□ 1.7
HLA-C-205ENST00000466892 TROQ12816 1431 aaPredicted RBP25.65■■□□□ 1.7
HLA-C-205ENST00000466892 LRRIQ1Q96JM4 1722 aa25.65■■□□□ 1.7
HLA-C-205ENST00000466892 TIAM1Q13009 1591 aa25.65■■□□□ 1.7
HLA-C-205ENST00000466892 CFAP43Q8NDM7 1665 aa25.62■■□□□ 1.69
HLA-C-205ENST00000466892 GLI2P10070 1586 aa25.61■■□□□ 1.69
HLA-C-205ENST00000466892 MTUS2Q5JR59 1369 aa25.58■■□□□ 1.69
HLA-C-205ENST00000466892 DIP2BQ9P265 1576 aa25.58■■□□□ 1.69
HLA-C-205ENST00000466892 EHBP1L1Q8N3D4 1523 aa25.58■■□□□ 1.68
HLA-C-205ENST00000466892 LRRC9Q6ZRR7 1453 aa25.55■■□□□ 1.68
HLA-C-205ENST00000466892 MAGI3Q5TCQ9 1506 aa25.54■■□□□ 1.68
HLA-C-205ENST00000466892 KIF14Q15058 1648 aa25.53■■□□□ 1.68
HLA-C-205ENST00000466892 FAM69CQ0P6D2 419 aa25.53■■□□□ 1.68
HLA-C-205ENST00000466892 KCNH8Q96L42 1107 aa25.53■■□□□ 1.68
HLA-C-205ENST00000466892 ABCA9Q8IUA7 1624 aa25.49■■□□□ 1.67
HLA-C-205ENST00000466892 TRHP20396 242 aaPredicted RBP25.48■■□□□ 1.67
HLA-C-205ENST00000466892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.67
HLA-C-205ENST00000466892 KANK4Q5T7N3 995 aaPredicted RBP25.44■■□□□ 1.66
HLA-C-205ENST00000466892 CD109Q6YHK3 1445 aa25.44■■□□□ 1.66
HLA-C-205ENST00000466892 MAP3K4Q9Y6R4 1608 aa25.44■■□□□ 1.66
HLA-C-205ENST00000466892 KIF13AQ9H1H9 1805 aa25.42■■□□□ 1.66
HLA-C-205ENST00000466892 ARAP3Q8WWN8 1544 aa25.41■■□□□ 1.66
HLA-C-205ENST00000466892 SUPT6HQ7KZ85 1726 aaKnown RBP25.4■■□□□ 1.66
HLA-C-205ENST00000466892 TTC37Q6PGP7 1564 aa25.39■■□□□ 1.66
HLA-C-205ENST00000466892 NCOA2Q15596 1464 aa25.39■■□□□ 1.65
HLA-C-205ENST00000466892 PLCH2O75038 1416 aa25.38■■□□□ 1.65
HLA-C-205ENST00000466892 TEX14Q8IWB6 1497 aa25.38■■□□□ 1.65
HLA-C-205ENST00000466892 CCNB3Q8WWL7 1395 aa25.36■■□□□ 1.65
HLA-C-205ENST00000466892 PHLDB1Q86UU1 1377 aa25.34■■□□□ 1.65
HLA-C-205ENST00000466892 GPATCH8Q9UKJ3 1502 aaKnown RBP25.32■■□□□ 1.64
HLA-C-205ENST00000466892 NEO1Q92859 1461 aa25.3■■□□□ 1.64
HLA-C-205ENST00000466892 MYO5CQ9NQX4 1742 aa25.29■■□□□ 1.64
HLA-C-205ENST00000466892 PREX2Q70Z35 1606 aa25.28■■□□□ 1.64
HLA-C-205ENST00000466892 EFCAB2Q5VUJ9 269 aa25.28■■□□□ 1.64
HLA-C-205ENST00000466892 MYOM3Q5VTT5 1437 aa25.27■■□□□ 1.64
HLA-C-205ENST00000466892 FANCAO15360 1455 aa25.27■■□□□ 1.64
HLA-C-205ENST00000466892 CFAP74Q9C0B2 1584 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms