RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 JPH4Q96JJ6 628 aa23.86■■□□□ 1.41
DNMT3A-208ENST00000466601 RIMBP3CA6NJZ7 1639 aa23.83■■□□□ 1.41
DNMT3A-208ENST00000466601 RIMBP3BA6NNM3 1639 aa23.83■■□□□ 1.41
DNMT3A-208ENST00000466601 RIMBP3Q9UFD9 1639 aa23.83■■□□□ 1.41
DNMT3A-208ENST00000466601 KIF21BO75037 1637 aa23.81■■□□□ 1.4
DNMT3A-208ENST00000466601 SHROOM2Q13796 1616 aa23.81■■□□□ 1.4
DNMT3A-208ENST00000466601 IQGAP2Q13576 1575 aa23.78■■□□□ 1.4
DNMT3A-208ENST00000466601 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
DNMT3A-208ENST00000466601 EHMT2Q96KQ7 1210 aa23.74■■□□□ 1.39
DNMT3A-208ENST00000466601 CTTNBP2Q8WZ74 1663 aa23.73■■□□□ 1.39
DNMT3A-208ENST00000466601 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
DNMT3A-208ENST00000466601 GOLGA3Q08378 1498 aa23.72■■□□□ 1.39
DNMT3A-208ENST00000466601 ARAP1Q96P48 1450 aa23.69■■□□□ 1.38
DNMT3A-208ENST00000466601 UBTFP17480 764 aaKnown RBP23.68■■□□□ 1.38
DNMT3A-208ENST00000466601 CYB5RLQ6IPT4 315 aa23.68■■□□□ 1.38
DNMT3A-208ENST00000466601 UGGT2Q9NYU1 1516 aa23.66■■□□□ 1.38
DNMT3A-208ENST00000466601 CARMIL2Q6F5E8 1435 aa23.64■■□□□ 1.37
DNMT3A-208ENST00000466601 DISP1Q96F81 1524 aa23.6■■□□□ 1.37
DNMT3A-208ENST00000466601 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
DNMT3A-208ENST00000466601 RANGAP1P46060 587 aaPredicted RBP23.55■■□□□ 1.36
DNMT3A-208ENST00000466601 KIAA0556O60303 1618 aa23.55■■□□□ 1.36
DNMT3A-208ENST00000466601 PTPRGP23470 1445 aa23.52■■□□□ 1.36
DNMT3A-208ENST00000466601 TTBK1Q5TCY1 1321 aaPredicted RBP23.52■■□□□ 1.36
DNMT3A-208ENST00000466601 P3H3Q8IVL6 736 aa23.49■■□□□ 1.35
DNMT3A-208ENST00000466601 LOC105371045A0A1W2PR82 267 aa23.46■■□□□ 1.35
DNMT3A-208ENST00000466601 SAMD9Q5K651 1589 aa23.46■■□□□ 1.35
DNMT3A-208ENST00000466601 EFCAB5A4FU69 1503 aa23.42■■□□□ 1.34
DNMT3A-208ENST00000466601 FHOD3Q2V2M9 1422 aa23.37■■□□□ 1.33
DNMT3A-208ENST00000466601 UACAQ9BZF9 1416 aa23.36■■□□□ 1.33
DNMT3A-208ENST00000466601 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
DNMT3A-208ENST00000466601 ADCY10Q96PN6 1610 aa23.33■■□□□ 1.33
DNMT3A-208ENST00000466601 UHRF1BP1LA0JNW5 1464 aa23.31■■□□□ 1.32
DNMT3A-208ENST00000466601 PLB1Q6P1J6 1458 aa23.31■■□□□ 1.32
DNMT3A-208ENST00000466601 NPM1P06748 294 aaKnown RBP eCLIP23.31■■□□□ 1.32
DNMT3A-208ENST00000466601 CLIP1P30622 1438 aa23.3■■□□□ 1.32
DNMT3A-208ENST00000466601 ABCC2Q92887 1545 aa23.29■■□□□ 1.32
DNMT3A-208ENST00000466601 ABCA8O94911 1581 aa23.28■■□□□ 1.32
DNMT3A-208ENST00000466601 CEP162Q5TB80 1403 aa23.25■■□□□ 1.31
DNMT3A-208ENST00000466601 FMN1Q68DA7 1419 aa23.22■■□□□ 1.31
DNMT3A-208ENST00000466601 RAPGEF6Q8TEU7 1601 aa23.2■■□□□ 1.3
DNMT3A-208ENST00000466601 KDM5BQ9UGL1 1544 aa23.2■■□□□ 1.3
DNMT3A-208ENST00000466601 ARID3CA6NKF2 412 aa23.15■■□□□ 1.3
DNMT3A-208ENST00000466601 MAPKBP1O60336 1514 aa23.14■■□□□ 1.3
DNMT3A-208ENST00000466601 ZCCHC11Q5TAX3 1644 aaKnown RBP23.14■■□□□ 1.29
DNMT3A-208ENST00000466601 NUP153P49790 1475 aaKnown RBP23.12■■□□□ 1.29
DNMT3A-208ENST00000466601 TRHP20396 242 aaPredicted RBP23.12■■□□□ 1.29
DNMT3A-208ENST00000466601 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
DNMT3A-208ENST00000466601 ATP10BO94823 1461 aa23.11■■□□□ 1.29
DNMT3A-208ENST00000466601 ASXL2Q76L83 1435 aa23.09■■□□□ 1.29
DNMT3A-208ENST00000466601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.08■■□□□ 1.29
DNMT3A-208ENST00000466601 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.29
DNMT3A-208ENST00000466601 CASKIN1Q8WXD9 1431 aa23.06■■□□□ 1.28
DNMT3A-208ENST00000466601 HECW1Q76N89 1606 aa23.05■■□□□ 1.28
DNMT3A-208ENST00000466601 PCF11O94913 1555 aaKnown RBP23.03■■□□□ 1.28
DNMT3A-208ENST00000466601 ABCC10Q5T3U5 1492 aa23.03■■□□□ 1.28
DNMT3A-208ENST00000466601 WDR7Q9Y4E6 1490 aa23.01■■□□□ 1.27
DNMT3A-208ENST00000466601 FAM69CQ0P6D2 419 aa23.01■■□□□ 1.27
DNMT3A-208ENST00000466601 EPRSP07814 1512 aaKnown RBP23.01■■□□□ 1.27
DNMT3A-208ENST00000466601 FYCO1Q9BQS8 1478 aa23■■□□□ 1.27
DNMT3A-208ENST00000466601 CDK13Q14004 1512 aaKnown RBP22.99■■□□□ 1.27
DNMT3A-208ENST00000466601 DIP2BQ9P265 1576 aa22.97■■□□□ 1.27
DNMT3A-208ENST00000466601 PLEKHD1A6NEE1 506 aa22.97■■□□□ 1.27
DNMT3A-208ENST00000466601 KCNH8Q96L42 1107 aa22.96■■□□□ 1.27
DNMT3A-208ENST00000466601 VPS8Q8N3P4 1428 aa22.96■■□□□ 1.27
DNMT3A-208ENST00000466601 KIF13AQ9H1H9 1805 aa22.94■■□□□ 1.26
DNMT3A-208ENST00000466601 CCDC18Q5T9S5 1454 aa22.93■■□□□ 1.26
DNMT3A-208ENST00000466601 CDK11AQ9UQ88 783 aaPredicted RBP22.93■■□□□ 1.26
DNMT3A-208ENST00000466601 LRRIQ1Q96JM4 1722 aa22.92■■□□□ 1.26
DNMT3A-208ENST00000466601 GLI2P10070 1586 aa22.9■■□□□ 1.26
DNMT3A-208ENST00000466601 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
DNMT3A-208ENST00000466601 MAP3K4Q9Y6R4 1608 aa22.79■■□□□ 1.24
DNMT3A-208ENST00000466601 CD109Q6YHK3 1445 aa22.79■■□□□ 1.24
DNMT3A-208ENST00000466601 MAGI3Q5TCQ9 1506 aa22.78■■□□□ 1.24
DNMT3A-208ENST00000466601 ABCA9Q8IUA7 1624 aa22.78■■□□□ 1.24
DNMT3A-208ENST00000466601 TSPOAP1O95153 1857 aa22.77■■□□□ 1.24
DNMT3A-208ENST00000466601 CFAP43Q8NDM7 1665 aa22.77■■□□□ 1.24
DNMT3A-208ENST00000466601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.75■■□□□ 1.23
DNMT3A-208ENST00000466601 MTUS2Q5JR59 1369 aa22.75■■□□□ 1.23
DNMT3A-208ENST00000466601 APLP2Q06481 763 aa22.74■■□□□ 1.23
DNMT3A-208ENST00000466601 TIAM1Q13009 1591 aa22.74■■□□□ 1.23
DNMT3A-208ENST00000466601 KIF14Q15058 1648 aa22.73■■□□□ 1.23
DNMT3A-208ENST00000466601 MAP3K1Q13233 1512 aa22.72■■□□□ 1.23
DNMT3A-208ENST00000466601 PPRC1Q5VV67 1664 aaKnown RBP22.71■■□□□ 1.23
DNMT3A-208ENST00000466601 TEX14Q8IWB6 1497 aa22.7■■□□□ 1.22
DNMT3A-208ENST00000466601 TTC37Q6PGP7 1564 aa22.7■■□□□ 1.22
DNMT3A-208ENST00000466601 EHBP1L1Q8N3D4 1523 aa22.68■■□□□ 1.22
DNMT3A-208ENST00000466601 KANK4Q5T7N3 995 aaPredicted RBP22.66■■□□□ 1.22
DNMT3A-208ENST00000466601 LRRC9Q6ZRR7 1453 aa22.66■■□□□ 1.22
DNMT3A-208ENST00000466601 PLCH2O75038 1416 aa22.64■■□□□ 1.21
DNMT3A-208ENST00000466601 MYO5CQ9NQX4 1742 aa22.6■■□□□ 1.21
DNMT3A-208ENST00000466601 PHLDB1Q86UU1 1377 aa22.58■■□□□ 1.21
DNMT3A-208ENST00000466601 CCNB3Q8WWL7 1395 aa22.58■■□□□ 1.21
DNMT3A-208ENST00000466601 FANCAO15360 1455 aa22.58■■□□□ 1.2
DNMT3A-208ENST00000466601 NEO1Q92859 1461 aa22.58■■□□□ 1.2
DNMT3A-208ENST00000466601 EFCAB2Q5VUJ9 269 aa22.57■■□□□ 1.2
DNMT3A-208ENST00000466601 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
DNMT3A-208ENST00000466601 ARAP3Q8WWN8 1544 aa22.57■■□□□ 1.2
DNMT3A-208ENST00000466601 NCOA2Q15596 1464 aa22.56■■□□□ 1.2
DNMT3A-208ENST00000466601 KDM6BO15054 1643 aa22.55■■□□□ 1.2
DNMT3A-208ENST00000466601 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms