RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 KIF21BO75037 1637 aa16.26■□□□□ 0.19
PMF1-204ENST00000466489 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
PMF1-204ENST00000466489 RIMBP3CA6NJZ7 1639 aa16.24■□□□□ 0.19
PMF1-204ENST00000466489 RIMBP3BA6NNM3 1639 aa16.24■□□□□ 0.19
PMF1-204ENST00000466489 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
PMF1-204ENST00000466489 RIMBP3Q9UFD9 1639 aa16.24■□□□□ 0.19
PMF1-204ENST00000466489 IQGAP2Q13576 1575 aa16.24■□□□□ 0.19
PMF1-204ENST00000466489 JPH4Q96JJ6 628 aa16.19■□□□□ 0.18
PMF1-204ENST00000466489 GOLGA3Q08378 1498 aa16.17■□□□□ 0.18
PMF1-204ENST00000466489 PRG4Q92954 1404 aaPredicted RBP16.16■□□□□ 0.18
PMF1-204ENST00000466489 CARMIL2Q6F5E8 1435 aa16.15■□□□□ 0.18
PMF1-204ENST00000466489 UBTFP17480 764 aaKnown RBP16.12■□□□□ 0.17
PMF1-204ENST00000466489 UGGT2Q9NYU1 1516 aa16.12■□□□□ 0.17
PMF1-204ENST00000466489 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
PMF1-204ENST00000466489 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
PMF1-204ENST00000466489 CYB5RLQ6IPT4 315 aa16.07■□□□□ 0.16
PMF1-204ENST00000466489 KIAA0556O60303 1618 aa16.06■□□□□ 0.16
PMF1-204ENST00000466489 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
PMF1-204ENST00000466489 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
PMF1-204ENST00000466489 DISP1Q96F81 1524 aa16.03■□□□□ 0.16
PMF1-204ENST00000466489 EFCAB5A4FU69 1503 aa16.02■□□□□ 0.15
PMF1-204ENST00000466489 PTPRGP23470 1445 aa16.01■□□□□ 0.15
PMF1-204ENST00000466489 SAMD9Q5K651 1589 aa16■□□□□ 0.15
PMF1-204ENST00000466489 RANGAP1P46060 587 aaPredicted RBP15.98■□□□□ 0.15
PMF1-204ENST00000466489 TTBK1Q5TCY1 1321 aaPredicted RBP15.96■□□□□ 0.15
PMF1-204ENST00000466489 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
PMF1-204ENST00000466489 P3H3Q8IVL6 736 aa15.91■□□□□ 0.14
PMF1-204ENST00000466489 UACAQ9BZF9 1416 aa15.9■□□□□ 0.14
PMF1-204ENST00000466489 ADCY10Q96PN6 1610 aa15.9■□□□□ 0.14
PMF1-204ENST00000466489 ABCC2Q92887 1545 aa15.89■□□□□ 0.13
PMF1-204ENST00000466489 UHRF1BP1LA0JNW5 1464 aa15.88■□□□□ 0.13
PMF1-204ENST00000466489 FHOD3Q2V2M9 1422 aa15.87■□□□□ 0.13
PMF1-204ENST00000466489 CLIP1P30622 1438 aa15.86■□□□□ 0.13
PMF1-204ENST00000466489 FMN1Q68DA7 1419 aa15.86■□□□□ 0.13
PMF1-204ENST00000466489 ARHGAP35Q9NRY4 1499 aa15.86■□□□□ 0.13
PMF1-204ENST00000466489 ABCA8O94911 1581 aa15.84■□□□□ 0.13
PMF1-204ENST00000466489 RAPGEF6Q8TEU7 1601 aa15.84■□□□□ 0.13
PMF1-204ENST00000466489 PLB1Q6P1J6 1458 aa15.84■□□□□ 0.13
PMF1-204ENST00000466489 LOC105371045A0A1W2PR82 267 aa15.82■□□□□ 0.12
PMF1-204ENST00000466489 CEP162Q5TB80 1403 aa15.82■□□□□ 0.12
PMF1-204ENST00000466489 ZCCHC11Q5TAX3 1644 aaKnown RBP15.79■□□□□ 0.12
PMF1-204ENST00000466489 MAPKBP1O60336 1514 aa15.79■□□□□ 0.12
PMF1-204ENST00000466489 KDM5BQ9UGL1 1544 aa15.79■□□□□ 0.12
PMF1-204ENST00000466489 HECW1Q76N89 1606 aa15.78■□□□□ 0.12
PMF1-204ENST00000466489 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
PMF1-204ENST00000466489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
PMF1-204ENST00000466489 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
PMF1-204ENST00000466489 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
PMF1-204ENST00000466489 NUP153P49790 1475 aaKnown RBP15.72■□□□□ 0.11
PMF1-204ENST00000466489 ASXL2Q76L83 1435 aa15.71■□□□□ 0.11
PMF1-204ENST00000466489 FYCO1Q9BQS8 1478 aa15.71■□□□□ 0.1
PMF1-204ENST00000466489 PCF11O94913 1555 aaKnown RBP15.7■□□□□ 0.1
PMF1-204ENST00000466489 CASKIN1Q8WXD9 1431 aa15.7■□□□□ 0.1
PMF1-204ENST00000466489 ARID3CA6NKF2 412 aa15.69■□□□□ 0.1
PMF1-204ENST00000466489 ATP10BO94823 1461 aa15.69■□□□□ 0.1
PMF1-204ENST00000466489 CCDC18Q5T9S5 1454 aa15.69■□□□□ 0.1
PMF1-204ENST00000466489 WDR7Q9Y4E6 1490 aa15.69■□□□□ 0.1
PMF1-204ENST00000466489 CDK11AQ9UQ88 783 aaPredicted RBP15.68■□□□□ 0.1
PMF1-204ENST00000466489 KIF13AQ9H1H9 1805 aa15.68■□□□□ 0.1
PMF1-204ENST00000466489 ABCC10Q5T3U5 1492 aa15.67■□□□□ 0.1
PMF1-204ENST00000466489 EPRSP07814 1512 aaKnown RBP15.67■□□□□ 0.1
PMF1-204ENST00000466489 DIP2BQ9P265 1576 aa15.66■□□□□ 0.1
PMF1-204ENST00000466489 PLEKHD1A6NEE1 506 aa15.64■□□□□ 0.09
PMF1-204ENST00000466489 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
PMF1-204ENST00000466489 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
PMF1-204ENST00000466489 FAM69CQ0P6D2 419 aa15.63■□□□□ 0.09
PMF1-204ENST00000466489 GLI2P10070 1586 aa15.62■□□□□ 0.09
PMF1-204ENST00000466489 LRRIQ1Q96JM4 1722 aa15.62■□□□□ 0.09
PMF1-204ENST00000466489 CFAP43Q8NDM7 1665 aa15.6■□□□□ 0.09
PMF1-204ENST00000466489 KCNH8Q96L42 1107 aa15.59■□□□□ 0.09
PMF1-204ENST00000466489 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
PMF1-204ENST00000466489 KIF14Q15058 1648 aa15.57■□□□□ 0.08
PMF1-204ENST00000466489 MAP3K4Q9Y6R4 1608 aa15.57■□□□□ 0.08
PMF1-204ENST00000466489 HRCP23327 699 aa15.56■□□□□ 0.08
PMF1-204ENST00000466489 APLP2Q06481 763 aa15.56■□□□□ 0.08
PMF1-204ENST00000466489 ABCA9Q8IUA7 1624 aa15.54■□□□□ 0.08
PMF1-204ENST00000466489 TEX14Q8IWB6 1497 aa15.54■□□□□ 0.08
PMF1-204ENST00000466489 TROQ12816 1431 aaPredicted RBP15.54■□□□□ 0.08
PMF1-204ENST00000466489 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.08
PMF1-204ENST00000466489 CD109Q6YHK3 1445 aa15.51■□□□□ 0.07
PMF1-204ENST00000466489 TIAM1Q13009 1591 aa15.51■□□□□ 0.07
PMF1-204ENST00000466489 EHBP1L1Q8N3D4 1523 aa15.5■□□□□ 0.07
PMF1-204ENST00000466489 MAP3K1Q13233 1512 aa15.49■□□□□ 0.07
PMF1-204ENST00000466489 MYO5CQ9NQX4 1742 aa15.49■□□□□ 0.07
PMF1-204ENST00000466489 CFAP74Q9C0B2 1584 aa15.48■□□□□ 0.07
PMF1-204ENST00000466489 MAGI3Q5TCQ9 1506 aa15.48■□□□□ 0.07
PMF1-204ENST00000466489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.48■□□□□ 0.07
PMF1-204ENST00000466489 TTC37Q6PGP7 1564 aa15.47■□□□□ 0.07
PMF1-204ENST00000466489 PPRC1Q5VV67 1664 aaKnown RBP15.47■□□□□ 0.07
PMF1-204ENST00000466489 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.06
PMF1-204ENST00000466489 ZEB1P37275 1124 aaPredicted RBP15.45■□□□□ 0.06
PMF1-204ENST00000466489 KDM6BO15054 1643 aa15.43■□□□□ 0.06
PMF1-204ENST00000466489 ARAP3Q8WWN8 1544 aa15.43■□□□□ 0.06
PMF1-204ENST00000466489 ITSN2Q9NZM3 1697 aa15.42■□□□□ 0.06
PMF1-204ENST00000466489 LRRC9Q6ZRR7 1453 aa15.42■□□□□ 0.06
PMF1-204ENST00000466489 PHLDB1Q86UU1 1377 aa15.42■□□□□ 0.06
PMF1-204ENST00000466489 NEO1Q92859 1461 aa15.41■□□□□ 0.06
PMF1-204ENST00000466489 PREX2Q70Z35 1606 aa15.4■□□□□ 0.06
PMF1-204ENST00000466489 ARHGAP5Q13017 1502 aa15.4■□□□□ 0.06
PMF1-204ENST00000466489 TRIM26Q12899 539 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms