RNA–Protein interactions for RNA: ENST00000466477.5

LCLAT1-206, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-206ENST00000466477 CUL7Q14999 1698 aa25.89■■□□□ 1.73
LCLAT1-206ENST00000466477 JPH4Q96JJ6 628 aa25.87■■□□□ 1.73
LCLAT1-206ENST00000466477 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
LCLAT1-206ENST00000466477 TTBK1Q5TCY1 1321 aaPredicted RBP25.76■■□□□ 1.71
LCLAT1-206ENST00000466477 KIAA0586Q9BVV6 1533 aa25.76■■□□□ 1.71
LCLAT1-206ENST00000466477 IQGAP2Q13576 1575 aa25.61■■□□□ 1.69
LCLAT1-206ENST00000466477 RAPGEF2Q9Y4G8 1499 aa25.61■■□□□ 1.69
LCLAT1-206ENST00000466477 ADCY10Q96PN6 1610 aa25.59■■□□□ 1.69
LCLAT1-206ENST00000466477 PTPRGP23470 1445 aa25.52■■□□□ 1.68
LCLAT1-206ENST00000466477 NPM1P06748 294 aaKnown RBP eCLIP25.51■■□□□ 1.67
LCLAT1-206ENST00000466477 CARMIL2Q6F5E8 1435 aa25.51■■□□□ 1.67
LCLAT1-206ENST00000466477 DISP1Q96F81 1524 aa25.48■■□□□ 1.67
LCLAT1-206ENST00000466477 TNIKQ9UKE5 1360 aa25.48■■□□□ 1.67
LCLAT1-206ENST00000466477 KIF13AQ9H1H9 1805 aa25.45■■□□□ 1.66
LCLAT1-206ENST00000466477 FAM69CQ0P6D2 419 aa25.43■■□□□ 1.66
LCLAT1-206ENST00000466477 MAPKBP1O60336 1514 aa25.42■■□□□ 1.66
LCLAT1-206ENST00000466477 UGGT2Q9NYU1 1516 aa25.41■■□□□ 1.66
LCLAT1-206ENST00000466477 KIAA0556O60303 1618 aa25.41■■□□□ 1.66
LCLAT1-206ENST00000466477 PRXQ9BXM0 1461 aa25.4■■□□□ 1.66
LCLAT1-206ENST00000466477 DIP2BQ9P265 1576 aa25.39■■□□□ 1.66
LCLAT1-206ENST00000466477 ABCC10Q5T3U5 1492 aa25.39■■□□□ 1.65
LCLAT1-206ENST00000466477 CTTNBP2Q8WZ74 1663 aa25.39■■□□□ 1.65
LCLAT1-206ENST00000466477 FAM9AQ8IZU1 332 aaPredicted RBP25.37■■□□□ 1.65
LCLAT1-206ENST00000466477 ABCC2Q92887 1545 aa25.33■■□□□ 1.65
LCLAT1-206ENST00000466477 UACAQ9BZF9 1416 aa25.33■■□□□ 1.65
LCLAT1-206ENST00000466477 CSRNP3Q8WYN3 585 aa25.28■■□□□ 1.64
LCLAT1-206ENST00000466477 ASXL2Q76L83 1435 aa25.27■■□□□ 1.64
LCLAT1-206ENST00000466477 RANGAP1P46060 587 aaPredicted RBP25.25■■□□□ 1.63
LCLAT1-206ENST00000466477 P3H3Q8IVL6 736 aa25.25■■□□□ 1.63
LCLAT1-206ENST00000466477 UHRF1BP1LA0JNW5 1464 aa25.25■■□□□ 1.63
LCLAT1-206ENST00000466477 PLB1Q6P1J6 1458 aa25.25■■□□□ 1.63
LCLAT1-206ENST00000466477 EHMT2Q96KQ7 1210 aa25.23■■□□□ 1.63
LCLAT1-206ENST00000466477 TSPOAP1O95153 1857 aa25.23■■□□□ 1.63
LCLAT1-206ENST00000466477 GOLGA3Q08378 1498 aa25.21■■□□□ 1.63
LCLAT1-206ENST00000466477 ZCCHC11Q5TAX3 1644 aaKnown RBP25.2■■□□□ 1.62
LCLAT1-206ENST00000466477 ARID3CA6NKF2 412 aa25.19■■□□□ 1.62
LCLAT1-206ENST00000466477 KDM5BQ9UGL1 1544 aa25.17■■□□□ 1.62
LCLAT1-206ENST00000466477 EEA1Q15075 1411 aa25.14■■□□□ 1.62
LCLAT1-206ENST00000466477 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
LCLAT1-206ENST00000466477 KDM6BO15054 1643 aa25.12■■□□□ 1.61
LCLAT1-206ENST00000466477 ABCA8O94911 1581 aa25.11■■□□□ 1.61
LCLAT1-206ENST00000466477 EPRSP07814 1512 aaKnown RBP25.11■■□□□ 1.61
LCLAT1-206ENST00000466477 WDR7Q9Y4E6 1490 aa25.05■■□□□ 1.6
LCLAT1-206ENST00000466477 AEBP2Q6ZN18 517 aaPredicted RBP25.05■■□□□ 1.6
LCLAT1-206ENST00000466477 GLI2P10070 1586 aa25.05■■□□□ 1.6
LCLAT1-206ENST00000466477 SAMD9Q5K651 1589 aa25.05■■□□□ 1.6
LCLAT1-206ENST00000466477 PPRC1Q5VV67 1664 aaKnown RBP25.04■■□□□ 1.6
LCLAT1-206ENST00000466477 FHOD3Q2V2M9 1422 aa25.03■■□□□ 1.6
LCLAT1-206ENST00000466477 KCNH8Q96L42 1107 aa25.01■■□□□ 1.59
LCLAT1-206ENST00000466477 KIF21BO75037 1637 aa25.01■■□□□ 1.59
LCLAT1-206ENST00000466477 MAP3K4Q9Y6R4 1608 aa24.97■■□□□ 1.59
LCLAT1-206ENST00000466477 ATP10BO94823 1461 aa24.92■■□□□ 1.58
LCLAT1-206ENST00000466477 RAPGEF6Q8TEU7 1601 aa24.92■■□□□ 1.58
LCLAT1-206ENST00000466477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.91■■□□□ 1.58
LCLAT1-206ENST00000466477 UBTFP17480 764 aaKnown RBP24.91■■□□□ 1.58
LCLAT1-206ENST00000466477 HNRNPUL2Q1KMD3 747 aaKnown RBP24.91■■□□□ 1.58
LCLAT1-206ENST00000466477 COL17A1Q9UMD9 1497 aaPredicted RBP24.9■■□□□ 1.58
LCLAT1-206ENST00000466477 TEX14Q8IWB6 1497 aa24.87■■□□□ 1.57
LCLAT1-206ENST00000466477 CD109Q6YHK3 1445 aa24.86■■□□□ 1.57
LCLAT1-206ENST00000466477 NUP153P49790 1475 aaKnown RBP24.85■■□□□ 1.57
LCLAT1-206ENST00000466477 EFCAB5A4FU69 1503 aa24.82■■□□□ 1.56
LCLAT1-206ENST00000466477 CFAP43Q8NDM7 1665 aa24.81■■□□□ 1.56
LCLAT1-206ENST00000466477 MAGI3Q5TCQ9 1506 aa24.76■■□□□ 1.55
LCLAT1-206ENST00000466477 KDM4FA0A1W2PPD8 638 aa24.74■■□□□ 1.55
LCLAT1-206ENST00000466477 ATP1B4Q9UN42 357 aaPredicted RBP24.74■■□□□ 1.55
LCLAT1-206ENST00000466477 CDK13Q14004 1512 aaKnown RBP24.73■■□□□ 1.55
LCLAT1-206ENST00000466477 ARHGAP35Q9NRY4 1499 aa24.72■■□□□ 1.55
LCLAT1-206ENST00000466477 ABCA9Q8IUA7 1624 aa24.7■■□□□ 1.54
LCLAT1-206ENST00000466477 ADGRL1O94910 1474 aa24.64■■□□□ 1.54
LCLAT1-206ENST00000466477 PLEKHD1A6NEE1 506 aa24.62■■□□□ 1.53
LCLAT1-206ENST00000466477 HECW1Q76N89 1606 aa24.59■■□□□ 1.53
LCLAT1-206ENST00000466477 FMN1Q68DA7 1419 aa24.59■■□□□ 1.53
LCLAT1-206ENST00000466477 TTC37Q6PGP7 1564 aa24.59■■□□□ 1.53
LCLAT1-206ENST00000466477 RAPGEF3O95398 923 aa24.57■■□□□ 1.52
LCLAT1-206ENST00000466477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.56■■□□□ 1.52
LCLAT1-206ENST00000466477 ARAP3Q8WWN8 1544 aa24.54■■□□□ 1.52
LCLAT1-206ENST00000466477 PCF11O94913 1555 aaKnown RBP24.51■■□□□ 1.51
LCLAT1-206ENST00000466477 NEO1Q92859 1461 aa24.51■■□□□ 1.51
LCLAT1-206ENST00000466477 FRMPD1Q5SYB0 1578 aa24.49■■□□□ 1.51
LCLAT1-206ENST00000466477 FANCAO15360 1455 aa24.48■■□□□ 1.51
LCLAT1-206ENST00000466477 KIF14Q15058 1648 aa24.47■■□□□ 1.51
LCLAT1-206ENST00000466477 LRRIQ1Q96JM4 1722 aa24.47■■□□□ 1.51
LCLAT1-206ENST00000466477 CLIP1P30622 1438 aa24.44■■□□□ 1.5
LCLAT1-206ENST00000466477 AKNAQ7Z591 1439 aa24.44■■□□□ 1.5
LCLAT1-206ENST00000466477 PHLDB1Q86UU1 1377 aa24.42■■□□□ 1.5
LCLAT1-206ENST00000466477 DENND4BO75064 1496 aaPredicted RBP24.4■■□□□ 1.5
LCLAT1-206ENST00000466477 CFAP74Q9C0B2 1584 aa24.39■■□□□ 1.5
LCLAT1-206ENST00000466477 TROQ12816 1431 aaPredicted RBP24.38■■□□□ 1.49
LCLAT1-206ENST00000466477 CASKIN1Q8WXD9 1431 aa24.38■■□□□ 1.49
LCLAT1-206ENST00000466477 CDK11AQ9UQ88 783 aaPredicted RBP24.37■■□□□ 1.49
LCLAT1-206ENST00000466477 RICTORQ6R327 1708 aa24.35■■□□□ 1.49
LCLAT1-206ENST00000466477 PLCH2O75038 1416 aa24.35■■□□□ 1.49
LCLAT1-206ENST00000466477 ARID4BQ4LE39 1312 aaPredicted RBP24.35■■□□□ 1.49
LCLAT1-206ENST00000466477 MYO5CQ9NQX4 1742 aa24.33■■□□□ 1.49
LCLAT1-206ENST00000466477 ARHGEF40Q8TER5 1519 aa24.33■■□□□ 1.49
LCLAT1-206ENST00000466477 ARHGAP5Q13017 1502 aa24.32■■□□□ 1.48
LCLAT1-206ENST00000466477 SCAPERQ9BY12 1400 aa24.32■■□□□ 1.48
LCLAT1-206ENST00000466477 YEATS2Q9ULM3 1422 aa24.31■■□□□ 1.48
LCLAT1-206ENST00000466477 CCDC18Q5T9S5 1454 aa24.31■■□□□ 1.48
LCLAT1-206ENST00000466477 FYCO1Q9BQS8 1478 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms