RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 FANCIQ9NVI1 1328 aa19.49■□□□□ 0.71
TGFBR3-204ENST00000465892 DEKP35659 375 aaKnown RBP19.45■□□□□ 0.7
TGFBR3-204ENST00000465892 SETD5Q9C0A6 1442 aa19.45■□□□□ 0.7
TGFBR3-204ENST00000465892 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
TGFBR3-204ENST00000465892 NBR1Q14596 966 aa19.42■□□□□ 0.7
TGFBR3-204ENST00000465892 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
TGFBR3-204ENST00000465892 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
TGFBR3-204ENST00000465892 B4GALNT3Q6L9W6 998 aa19.38■□□□□ 0.69
TGFBR3-204ENST00000465892 PRKCSHP14314 528 aaPredicted RBP19.38■□□□□ 0.69
TGFBR3-204ENST00000465892 ARHGAP35Q9NRY4 1499 aa19.36■□□□□ 0.69
TGFBR3-204ENST00000465892 P3H3Q8IVL6 736 aa19.35■□□□□ 0.69
TGFBR3-204ENST00000465892 PHLDB1Q86UU1 1377 aa19.33■□□□□ 0.69
TGFBR3-204ENST00000465892 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
TGFBR3-204ENST00000465892 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
TGFBR3-204ENST00000465892 CCDC184Q52MB2 194 aa19.29■□□□□ 0.68
TGFBR3-204ENST00000465892 TONSLQ96HA7 1378 aa19.29■□□□□ 0.68
TGFBR3-204ENST00000465892 PAK3O75914 559 aaPredicted RBP19.28■□□□□ 0.68
TGFBR3-204ENST00000465892 PPP4R2Q9NY27 417 aa19.28■□□□□ 0.68
TGFBR3-204ENST00000465892 FAM9BQ8IZU0 186 aa19.26■□□□□ 0.67
TGFBR3-204ENST00000465892 ATAD2BQ9ULI0 1458 aa19.25■□□□□ 0.67
TGFBR3-204ENST00000465892 ANO8Q9HCE9 1232 aaPredicted RBP19.24■□□□□ 0.67
TGFBR3-204ENST00000465892 TIMELESSQ9UNS1 1208 aa19.24■□□□□ 0.67
TGFBR3-204ENST00000465892 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
TGFBR3-204ENST00000465892 NOP58Q9Y2X3 529 aaKnown RBP19.22■□□□□ 0.67
TGFBR3-204ENST00000465892 CNGB1Q14028 1251 aaPredicted RBP19.21■□□□□ 0.67
TGFBR3-204ENST00000465892 SENP3-EIF4A1A0A087X0R7 540 aa19.2■□□□□ 0.66
TGFBR3-204ENST00000465892 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
TGFBR3-204ENST00000465892 LRRC9Q6ZRR7 1453 aa19.18■□□□□ 0.66
TGFBR3-204ENST00000465892 TIAM1Q13009 1591 aa19.18■□□□□ 0.66
TGFBR3-204ENST00000465892 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
TGFBR3-204ENST00000465892 WASHC2AQ641Q2 1341 aa19.15■□□□□ 0.66
TGFBR3-204ENST00000465892 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.65
TGFBR3-204ENST00000465892 BICRAQ9NZM4 1560 aa19.13■□□□□ 0.65
TGFBR3-204ENST00000465892 HSPA5P11021 654 aaKnown RBP19.12■□□□□ 0.65
TGFBR3-204ENST00000465892 CUX1P39880 1505 aa19.12■□□□□ 0.65
TGFBR3-204ENST00000465892 RTN4Q9NQC3 1192 aaKnown RBP19.12■□□□□ 0.65
TGFBR3-204ENST00000465892 MRS2Q9HD23 443 aa19.11■□□□□ 0.65
TGFBR3-204ENST00000465892 SALL2Q9Y467 1007 aaPredicted RBP19.1■□□□□ 0.65
TGFBR3-204ENST00000465892 ERICH6BQ5W0A0 696 aa19.08■□□□□ 0.64
TGFBR3-204ENST00000465892 IL27Q8NEV9 243 aa19.06■□□□□ 0.64
TGFBR3-204ENST00000465892 CCDC136Q96JN2 1154 aa19.06■□□□□ 0.64
TGFBR3-204ENST00000465892 RTL5Q5HYW3 569 aaPredicted RBP19.05■□□□□ 0.64
TGFBR3-204ENST00000465892 C11orf95C9JLR9 678 aaPredicted RBP19.04■□□□□ 0.64
TGFBR3-204ENST00000465892 IGF1RP08069 1367 aa19.03■□□□□ 0.64
TGFBR3-204ENST00000465892 ANP32AP39687 249 aaKnown RBP19.01■□□□□ 0.63
TGFBR3-204ENST00000465892 PRKRIP1Q9H875 184 aaPredicted RBP19.01■□□□□ 0.63
TGFBR3-204ENST00000465892 CCDC18Q5T9S5 1454 aa19.01■□□□□ 0.63
TGFBR3-204ENST00000465892 ZBTB47Q9UFB7 747 aaPredicted RBP19.01■□□□□ 0.63
TGFBR3-204ENST00000465892 NPM2Q86SE8 214 aaKnown RBP19■□□□□ 0.63
TGFBR3-204ENST00000465892 EIF4G2P78344 907 aaKnown RBP eCLIP18.99■□□□□ 0.636e-7■■■■■ 31.9
TGFBR3-204ENST00000465892 IPO9Q96P70 1041 aaKnown RBP18.99■□□□□ 0.63
TGFBR3-204ENST00000465892 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
TGFBR3-204ENST00000465892 AKNAQ7Z591 1439 aa18.98■□□□□ 0.63
TGFBR3-204ENST00000465892 CHIC2Q9UKJ5 165 aa18.97■□□□□ 0.63
TGFBR3-204ENST00000465892 FHOD3Q2V2M9 1422 aa18.97■□□□□ 0.63
TGFBR3-204ENST00000465892 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
TGFBR3-204ENST00000465892 MAP3K1Q13233 1512 aa18.97■□□□□ 0.63
TGFBR3-204ENST00000465892 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.634e-7■■■■□ 23.2
TGFBR3-204ENST00000465892 ZBED9Q6R2W3 1325 aa18.97■□□□□ 0.63
TGFBR3-204ENST00000465892 PTPRKQ15262 1439 aa18.97■□□□□ 0.63
TGFBR3-204ENST00000465892 RRP7BPQ9NSQ0 103 aa18.97■□□□□ 0.63
TGFBR3-204ENST00000465892 PCF11O94913 1555 aaKnown RBP18.95■□□□□ 0.62
TGFBR3-204ENST00000465892 FOXD1Q16676 465 aa18.95■□□□□ 0.62
TGFBR3-204ENST00000465892 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.95■□□□□ 0.62
TGFBR3-204ENST00000465892 POLR3GLQ9BT43 218 aa18.94■□□□□ 0.62
TGFBR3-204ENST00000465892 UACAQ9BZF9 1416 aa18.93■□□□□ 0.62
TGFBR3-204ENST00000465892 LAS1LQ9Y4W2 734 aaKnown RBP18.93■□□□□ 0.62
TGFBR3-204ENST00000465892 CNTLNQ9NXG0 1405 aa18.91■□□□□ 0.62
TGFBR3-204ENST00000465892 FGD6Q6ZV73 1430 aa18.89■□□□□ 0.61
TGFBR3-204ENST00000465892 KDM5BQ9UGL1 1544 aa18.88■□□□□ 0.61
TGFBR3-204ENST00000465892 L3MBTL2Q969R5 705 aa18.88■□□□□ 0.61
TGFBR3-204ENST00000465892 MTUS2Q5JR59 1369 aa18.85■□□□□ 0.61
TGFBR3-204ENST00000465892 HFM1A2PYH4 1435 aa18.85■□□□□ 0.61
TGFBR3-204ENST00000465892 CCDC7Q96M83 1385 aa18.85■□□□□ 0.61
TGFBR3-204ENST00000465892 NAIPQ13075 1403 aa18.85■□□□□ 0.61
TGFBR3-204ENST00000465892 CFAP43Q8NDM7 1665 aa18.83■□□□□ 0.61
TGFBR3-204ENST00000465892 NEFMP07197 916 aa18.83■□□□□ 0.61
TGFBR3-204ENST00000465892 PTPN23Q9H3S7 1636 aa18.82■□□□□ 0.6
TGFBR3-204ENST00000465892 NUDCQ9Y266 331 aa18.81■□□□□ 0.6
TGFBR3-204ENST00000465892 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
TGFBR3-204ENST00000465892 NBPF8Q3BBV2 869 aa18.79■□□□□ 0.6
TGFBR3-204ENST00000465892 KIF7Q2M1P5 1343 aa18.79■□□□□ 0.6
TGFBR3-204ENST00000465892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.79■□□□□ 0.6
TGFBR3-204ENST00000465892 FMN1Q68DA7 1419 aa18.78■□□□□ 0.6
TGFBR3-204ENST00000465892 NCOA1Q15788 1441 aa18.76■□□□□ 0.59
TGFBR3-204ENST00000465892 MPHOSPH9Q99550 1183 aa18.75■□□□□ 0.59
TGFBR3-204ENST00000465892 SMG6Q86US8 1419 aaKnown RBP18.74■□□□□ 0.59
TGFBR3-204ENST00000465892 CASKIN1Q8WXD9 1431 aa18.74■□□□□ 0.59
TGFBR3-204ENST00000465892 CFTRP13569 1480 aa18.74■□□□□ 0.59
TGFBR3-204ENST00000465892 FYCO1Q9BQS8 1478 aa18.73■□□□□ 0.59
TGFBR3-204ENST00000465892 ZNF326Q5BKZ1 582 aaKnown RBP18.73■□□□□ 0.59
TGFBR3-204ENST00000465892 FGD5Q6ZNL6 1462 aa18.72■□□□□ 0.59
TGFBR3-204ENST00000465892 SKAP1Q86WV1 359 aa18.72■□□□□ 0.59
TGFBR3-204ENST00000465892 ARID3CA6NKF2 412 aa18.71■□□□□ 0.59
TGFBR3-204ENST00000465892 EXOC6Q8TAG9 804 aa18.71■□□□□ 0.59
TGFBR3-204ENST00000465892 DENND4BO75064 1496 aaPredicted RBP18.7■□□□□ 0.58
TGFBR3-204ENST00000465892 BRPF3Q9ULD4 1205 aa18.7■□□□□ 0.58
TGFBR3-204ENST00000465892 PDE4AP27815 886 aa18.69■□□□□ 0.58
TGFBR3-204ENST00000465892 RNF123Q5XPI4 1314 aa18.68■□□□□ 0.58
TGFBR3-204ENST00000465892 TMC1Q8TDI8 760 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms