RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
ATF3-208ENST00000465155 CTTNBP2Q8WZ74 1663 aa21.69■■□□□ 1.06
ATF3-208ENST00000465155 TNIKQ9UKE5 1360 aa21.67■■□□□ 1.06
ATF3-208ENST00000465155 CEP170Q5SW79 1584 aa21.65■■□□□ 1.06
ATF3-208ENST00000465155 NUP160Q12769 1436 aa21.62■■□□□ 1.05
ATF3-208ENST00000465155 KIAA0586Q9BVV6 1533 aa21.57■■□□□ 1.04
ATF3-208ENST00000465155 IQGAP2Q13576 1575 aa21.56■■□□□ 1.04
ATF3-208ENST00000465155 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
ATF3-208ENST00000465155 CEP162Q5TB80 1403 aa21.54■■□□□ 1.04
ATF3-208ENST00000465155 CLASP1Q7Z460 1538 aa21.48■■□□□ 1.03
ATF3-208ENST00000465155 CLIP1P30622 1438 aa21.47■■□□□ 1.03
ATF3-208ENST00000465155 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
ATF3-208ENST00000465155 UGGT2Q9NYU1 1516 aa21.44■■□□□ 1.02
ATF3-208ENST00000465155 JPH4Q96JJ6 628 aa21.42■■□□□ 1.02
ATF3-208ENST00000465155 ARHGAP35Q9NRY4 1499 aa21.41■■□□□ 1.02
ATF3-208ENST00000465155 EFCAB5A4FU69 1503 aa21.41■■□□□ 1.02
ATF3-208ENST00000465155 SHROOM2Q13796 1616 aa21.41■■□□□ 1.02
ATF3-208ENST00000465155 SAMD9Q5K651 1589 aa21.41■■□□□ 1.02
ATF3-208ENST00000465155 P3H3Q8IVL6 736 aa21.37■■□□□ 1.01
ATF3-208ENST00000465155 DISP1Q96F81 1524 aa21.36■■□□□ 1.01
ATF3-208ENST00000465155 KIAA0556O60303 1618 aa21.36■■□□□ 1.01
ATF3-208ENST00000465155 PRG4Q92954 1404 aaPredicted RBP21.34■■□□□ 1.01
ATF3-208ENST00000465155 ARAP1Q96P48 1450 aa21.33■■□□□ 1.01
ATF3-208ENST00000465155 FHOD3Q2V2M9 1422 aa21.32■■□□□ 1
ATF3-208ENST00000465155 CARMIL2Q6F5E8 1435 aa21.32■■□□□ 1
ATF3-208ENST00000465155 FOXD1Q16676 465 aa21.29■■□□□ 1
ATF3-208ENST00000465155 ERCC6L2Q5T890 1561 aa21.28■■□□□ 1
ATF3-208ENST00000465155 VPS8Q8N3P4 1428 aa21.22■□□□□ 0.99
ATF3-208ENST00000465155 TTBK1Q5TCY1 1321 aaPredicted RBP21.22■□□□□ 0.99
ATF3-208ENST00000465155 FMN1Q68DA7 1419 aa21.2■□□□□ 0.98
ATF3-208ENST00000465155 PCF11O94913 1555 aaKnown RBP21.15■□□□□ 0.98
ATF3-208ENST00000465155 PTPRGP23470 1445 aa21.15■□□□□ 0.98
ATF3-208ENST00000465155 ARHGEF11O15085 1522 aa21.14■□□□□ 0.98
ATF3-208ENST00000465155 PLPPR3Q6T4P5 718 aa21.11■□□□□ 0.97
ATF3-208ENST00000465155 RIMBP3CA6NJZ7 1639 aa21.1■□□□□ 0.97
ATF3-208ENST00000465155 RIMBP3BA6NNM3 1639 aa21.1■□□□□ 0.97
ATF3-208ENST00000465155 RIMBP3Q9UFD9 1639 aa21.1■□□□□ 0.97
ATF3-208ENST00000465155 RAPGEF6Q8TEU7 1601 aa21.1■□□□□ 0.97
ATF3-208ENST00000465155 CASKIN1Q8WXD9 1431 aa21.1■□□□□ 0.97
ATF3-208ENST00000465155 FYCO1Q9BQS8 1478 aa21.09■□□□□ 0.97
ATF3-208ENST00000465155 PLB1Q6P1J6 1458 aa21.09■□□□□ 0.97
ATF3-208ENST00000465155 ATP1B4Q9UN42 357 aaPredicted RBP21.08■□□□□ 0.97
ATF3-208ENST00000465155 ABCA8O94911 1581 aa21.07■□□□□ 0.96
ATF3-208ENST00000465155 HECW1Q76N89 1606 aa21.06■□□□□ 0.96
ATF3-208ENST00000465155 LRRIQ1Q96JM4 1722 aa21.04■□□□□ 0.96
ATF3-208ENST00000465155 UACAQ9BZF9 1416 aa21.03■□□□□ 0.96
ATF3-208ENST00000465155 NUP153P49790 1475 aaKnown RBP21■□□□□ 0.95
ATF3-208ENST00000465155 APLP2Q06481 763 aa21■□□□□ 0.95
ATF3-208ENST00000465155 ABCC2Q92887 1545 aa20.99■□□□□ 0.95
ATF3-208ENST00000465155 CFAP43Q8NDM7 1665 aa20.97■□□□□ 0.95
ATF3-208ENST00000465155 EPRSP07814 1512 aaKnown RBP20.97■□□□□ 0.95
ATF3-208ENST00000465155 ARID3CA6NKF2 412 aa20.96■□□□□ 0.95
ATF3-208ENST00000465155 CCDC18Q5T9S5 1454 aa20.96■□□□□ 0.95
ATF3-208ENST00000465155 ADCY10Q96PN6 1610 aa20.96■□□□□ 0.95
ATF3-208ENST00000465155 TIAM1Q13009 1591 aa20.95■□□□□ 0.94
ATF3-208ENST00000465155 UHRF1BP1LA0JNW5 1464 aa20.95■□□□□ 0.94
ATF3-208ENST00000465155 CDK13Q14004 1512 aaKnown RBP20.95■□□□□ 0.94
ATF3-208ENST00000465155 MAP3K1Q13233 1512 aa20.93■□□□□ 0.94
ATF3-208ENST00000465155 CYB5RLQ6IPT4 315 aa20.93■□□□□ 0.94
ATF3-208ENST00000465155 ATP10BO94823 1461 aa20.9■□□□□ 0.94
ATF3-208ENST00000465155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.89■□□□□ 0.94
ATF3-208ENST00000465155 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.94
ATF3-208ENST00000465155 PPARGC1BQ86YN6 1023 aaKnown RBP20.89■□□□□ 0.94
ATF3-208ENST00000465155 ZCCHC11Q5TAX3 1644 aaKnown RBP20.88■□□□□ 0.93
ATF3-208ENST00000465155 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
ATF3-208ENST00000465155 KDM5BQ9UGL1 1544 aa20.87■□□□□ 0.93
ATF3-208ENST00000465155 KANK4Q5T7N3 995 aaPredicted RBP20.86■□□□□ 0.93
ATF3-208ENST00000465155 LRRC9Q6ZRR7 1453 aa20.84■□□□□ 0.93
ATF3-208ENST00000465155 MAGI3Q5TCQ9 1506 aa20.83■□□□□ 0.92
ATF3-208ENST00000465155 MTUS2Q5JR59 1369 aa20.82■□□□□ 0.92
ATF3-208ENST00000465155 CDK11AQ9UQ88 783 aaPredicted RBP20.81■□□□□ 0.92
ATF3-208ENST00000465155 EHBP1L1Q8N3D4 1523 aa20.79■□□□□ 0.92
ATF3-208ENST00000465155 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
ATF3-208ENST00000465155 PLEKHD1A6NEE1 506 aa20.77■□□□□ 0.92
ATF3-208ENST00000465155 TROQ12816 1431 aaPredicted RBP20.75■□□□□ 0.91
ATF3-208ENST00000465155 SUPT6HQ7KZ85 1726 aaKnown RBP20.74■□□□□ 0.91
ATF3-208ENST00000465155 ASXL2Q76L83 1435 aa20.7■□□□□ 0.9
ATF3-208ENST00000465155 KIF14Q15058 1648 aa20.7■□□□□ 0.9
ATF3-208ENST00000465155 WDR7Q9Y4E6 1490 aa20.69■□□□□ 0.9
ATF3-208ENST00000465155 NCOA2Q15596 1464 aa20.68■□□□□ 0.9
ATF3-208ENST00000465155 MAPKBP1O60336 1514 aa20.67■□□□□ 0.9
ATF3-208ENST00000465155 KCNH8Q96L42 1107 aa20.65■□□□□ 0.9
ATF3-208ENST00000465155 PHLDB1Q86UU1 1377 aa20.62■□□□□ 0.89
ATF3-208ENST00000465155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.6■□□□□ 0.891e-6■■■■□ 23.9
ATF3-208ENST00000465155 ABCC10Q5T3U5 1492 aa20.6■□□□□ 0.89
ATF3-208ENST00000465155 TTC37Q6PGP7 1564 aa20.59■□□□□ 0.89
ATF3-208ENST00000465155 CCNB3Q8WWL7 1395 aa20.58■□□□□ 0.88
ATF3-208ENST00000465155 CDC42BPAQ5VT25 1732 aa20.56■□□□□ 0.88
ATF3-208ENST00000465155 ITSN2Q9NZM3 1697 aa20.56■□□□□ 0.88
ATF3-208ENST00000465155 MYOM3Q5VTT5 1437 aa20.56■□□□□ 0.88
ATF3-208ENST00000465155 ABCA9Q8IUA7 1624 aa20.55■□□□□ 0.88
ATF3-208ENST00000465155 MYO5CQ9NQX4 1742 aa20.54■□□□□ 0.88
ATF3-208ENST00000465155 GPATCH8Q9UKJ3 1502 aaKnown RBP20.53■□□□□ 0.88
ATF3-208ENST00000465155 PREX2Q70Z35 1606 aa20.52■□□□□ 0.88
ATF3-208ENST00000465155 FGD6Q6ZV73 1430 aa20.51■□□□□ 0.87
ATF3-208ENST00000465155 DIP2BQ9P265 1576 aa20.51■□□□□ 0.87
ATF3-208ENST00000465155 CDC42BPBQ9Y5S2 1711 aa20.51■□□□□ 0.87
ATF3-208ENST00000465155 RRBP1Q9P2E9 1410 aaKnown RBP20.5■□□□□ 0.87
ATF3-208ENST00000465155 TRIM26Q12899 539 aaPredicted RBP20.49■□□□□ 0.87
ATF3-208ENST00000465155 GLI2P10070 1586 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms