RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 EEA1Q15075 1411 aa19.1■□□□□ 0.65
SEC61A1-203ENST00000464451 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
SEC61A1-203ENST00000464451 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
SEC61A1-203ENST00000464451 ARHGEF11O15085 1522 aa19.09■□□□□ 0.65
SEC61A1-203ENST00000464451 RIMBP3CA6NJZ7 1639 aa19.08■□□□□ 0.64
SEC61A1-203ENST00000464451 RIMBP3BA6NNM3 1639 aa19.08■□□□□ 0.64
SEC61A1-203ENST00000464451 RIMBP3Q9UFD9 1639 aa19.08■□□□□ 0.64
SEC61A1-203ENST00000464451 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
SEC61A1-203ENST00000464451 KIAA0586Q9BVV6 1533 aa19.02■□□□□ 0.64
SEC61A1-203ENST00000464451 ERCC6L2Q5T890 1561 aa19.01■□□□□ 0.63
SEC61A1-203ENST00000464451 CYB5RLQ6IPT4 315 aa18.99■□□□□ 0.63
SEC61A1-203ENST00000464451 SHROOM2Q13796 1616 aa18.98■□□□□ 0.63
SEC61A1-203ENST00000464451 PRG4Q92954 1404 aaPredicted RBP18.98■□□□□ 0.63
SEC61A1-203ENST00000464451 ARAP1Q96P48 1450 aa18.95■□□□□ 0.62
SEC61A1-203ENST00000464451 IQGAP2Q13576 1575 aa18.95■□□□□ 0.62
SEC61A1-203ENST00000464451 KIF21BO75037 1637 aa18.92■□□□□ 0.62
SEC61A1-203ENST00000464451 CTTNBP2Q8WZ74 1663 aa18.92■□□□□ 0.62
SEC61A1-203ENST00000464451 RANGAP1P46060 587 aaPredicted RBP18.92■□□□□ 0.62
SEC61A1-203ENST00000464451 TTBK1Q5TCY1 1321 aaPredicted RBP18.92■□□□□ 0.62
SEC61A1-203ENST00000464451 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
SEC61A1-203ENST00000464451 TNIKQ9UKE5 1360 aa18.87■□□□□ 0.61
SEC61A1-203ENST00000464451 GOLGA3Q08378 1498 aa18.85■□□□□ 0.61
SEC61A1-203ENST00000464451 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.6
SEC61A1-203ENST00000464451 DISP1Q96F81 1524 aa18.82■□□□□ 0.6
SEC61A1-203ENST00000464451 CARMIL2Q6F5E8 1435 aa18.82■□□□□ 0.6
SEC61A1-203ENST00000464451 P3H3Q8IVL6 736 aa18.82■□□□□ 0.6
SEC61A1-203ENST00000464451 CEP162Q5TB80 1403 aa18.81■□□□□ 0.6
SEC61A1-203ENST00000464451 KIAA0556O60303 1618 aa18.77■□□□□ 0.6
SEC61A1-203ENST00000464451 PTPRGP23470 1445 aa18.76■□□□□ 0.59
SEC61A1-203ENST00000464451 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
SEC61A1-203ENST00000464451 PPARGC1BQ86YN6 1023 aaKnown RBP18.74■□□□□ 0.59
SEC61A1-203ENST00000464451 SAMD9Q5K651 1589 aa18.68■□□□□ 0.58
SEC61A1-203ENST00000464451 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
SEC61A1-203ENST00000464451 ADCY10Q96PN6 1610 aa18.65■□□□□ 0.58
SEC61A1-203ENST00000464451 PLB1Q6P1J6 1458 aa18.63■□□□□ 0.57
SEC61A1-203ENST00000464451 UACAQ9BZF9 1416 aa18.62■□□□□ 0.57
SEC61A1-203ENST00000464451 NPM1P06748 294 aaKnown RBP eCLIP18.6■□□□□ 0.57
SEC61A1-203ENST00000464451 ARHGAP35Q9NRY4 1499 aa18.6■□□□□ 0.57
SEC61A1-203ENST00000464451 EFCAB5A4FU69 1503 aa18.6■□□□□ 0.57
SEC61A1-203ENST00000464451 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
SEC61A1-203ENST00000464451 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
SEC61A1-203ENST00000464451 ABCC2Q92887 1545 aa18.57■□□□□ 0.56
SEC61A1-203ENST00000464451 ABCA8O94911 1581 aa18.55■□□□□ 0.56
SEC61A1-203ENST00000464451 UHRF1BP1LA0JNW5 1464 aa18.55■□□□□ 0.56
SEC61A1-203ENST00000464451 CLIP1P30622 1438 aa18.54■□□□□ 0.56
SEC61A1-203ENST00000464451 ATP1B4Q9UN42 357 aaPredicted RBP18.51■□□□□ 0.55
SEC61A1-203ENST00000464451 RAPGEF6Q8TEU7 1601 aa18.49■□□□□ 0.55
SEC61A1-203ENST00000464451 ZCCHC11Q5TAX3 1644 aaKnown RBP18.48■□□□□ 0.55
SEC61A1-203ENST00000464451 KDM5BQ9UGL1 1544 aa18.48■□□□□ 0.55
SEC61A1-203ENST00000464451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
SEC61A1-203ENST00000464451 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
SEC61A1-203ENST00000464451 FMN1Q68DA7 1419 aa18.45■□□□□ 0.54
SEC61A1-203ENST00000464451 MAPKBP1O60336 1514 aa18.45■□□□□ 0.54
SEC61A1-203ENST00000464451 ASXL2Q76L83 1435 aa18.45■□□□□ 0.54
SEC61A1-203ENST00000464451 VPS8Q8N3P4 1428 aa18.45■□□□□ 0.54
SEC61A1-203ENST00000464451 NUP153P49790 1475 aaKnown RBP18.45■□□□□ 0.54
SEC61A1-203ENST00000464451 ATP10BO94823 1461 aa18.43■□□□□ 0.54
SEC61A1-203ENST00000464451 FAM69CQ0P6D2 419 aa18.41■□□□□ 0.54
SEC61A1-203ENST00000464451 KCNH8Q96L42 1107 aa18.39■□□□□ 0.53
SEC61A1-203ENST00000464451 PCF11O94913 1555 aaKnown RBP18.37■□□□□ 0.53
SEC61A1-203ENST00000464451 CDK13Q14004 1512 aaKnown RBP18.37■□□□□ 0.53
SEC61A1-203ENST00000464451 ABCC10Q5T3U5 1492 aa18.37■□□□□ 0.53
SEC61A1-203ENST00000464451 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
SEC61A1-203ENST00000464451 DIP2BQ9P265 1576 aa18.36■□□□□ 0.53
SEC61A1-203ENST00000464451 HECW1Q76N89 1606 aa18.35■□□□□ 0.53
SEC61A1-203ENST00000464451 KIF13AQ9H1H9 1805 aa18.35■□□□□ 0.53
SEC61A1-203ENST00000464451 APLP2Q06481 763 aa18.35■□□□□ 0.53
SEC61A1-203ENST00000464451 WDR7Q9Y4E6 1490 aa18.35■□□□□ 0.53
SEC61A1-203ENST00000464451 CASKIN1Q8WXD9 1431 aa18.34■□□□□ 0.53
SEC61A1-203ENST00000464451 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.53
SEC61A1-203ENST00000464451 LRRIQ1Q96JM4 1722 aa18.32■□□□□ 0.52
SEC61A1-203ENST00000464451 PLEKHD1A6NEE1 506 aa18.3■□□□□ 0.52
SEC61A1-203ENST00000464451 FYCO1Q9BQS8 1478 aa18.29■□□□□ 0.52
SEC61A1-203ENST00000464451 TSPOAP1O95153 1857 aa18.26■□□□□ 0.51
SEC61A1-203ENST00000464451 GLI2P10070 1586 aa18.24■□□□□ 0.51
SEC61A1-203ENST00000464451 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
SEC61A1-203ENST00000464451 CCDC18Q5T9S5 1454 aa18.22■□□□□ 0.51
SEC61A1-203ENST00000464451 MAP3K4Q9Y6R4 1608 aa18.2■□□□□ 0.5
SEC61A1-203ENST00000464451 MAGI3Q5TCQ9 1506 aa18.19■□□□□ 0.5
SEC61A1-203ENST00000464451 CD109Q6YHK3 1445 aa18.19■□□□□ 0.5
SEC61A1-203ENST00000464451 TROQ12816 1431 aaPredicted RBP18.17■□□□□ 0.5
SEC61A1-203ENST00000464451 PPRC1Q5VV67 1664 aaKnown RBP18.16■□□□□ 0.5
SEC61A1-203ENST00000464451 KIF14Q15058 1648 aa18.16■□□□□ 0.5
SEC61A1-203ENST00000464451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.15■□□□□ 0.52e-6■■■□□ 16.6
SEC61A1-203ENST00000464451 ABCA9Q8IUA7 1624 aa18.15■□□□□ 0.5
SEC61A1-203ENST00000464451 CFAP43Q8NDM7 1665 aa18.15■□□□□ 0.5
SEC61A1-203ENST00000464451 TTC37Q6PGP7 1564 aa18.14■□□□□ 0.49
SEC61A1-203ENST00000464451 MTUS2Q5JR59 1369 aa18.12■□□□□ 0.49
SEC61A1-203ENST00000464451 TIAM1Q13009 1591 aa18.1■□□□□ 0.49
SEC61A1-203ENST00000464451 KANK4Q5T7N3 995 aaPredicted RBP18.08■□□□□ 0.49
SEC61A1-203ENST00000464451 TEX14Q8IWB6 1497 aa18.08■□□□□ 0.48
SEC61A1-203ENST00000464451 KDM6BO15054 1643 aa18.04■□□□□ 0.48
SEC61A1-203ENST00000464451 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
SEC61A1-203ENST00000464451 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
SEC61A1-203ENST00000464451 LRRC9Q6ZRR7 1453 aa18.03■□□□□ 0.48
SEC61A1-203ENST00000464451 PLCH2O75038 1416 aa18.03■□□□□ 0.48
SEC61A1-203ENST00000464451 FANCAO15360 1455 aa18.02■□□□□ 0.48
SEC61A1-203ENST00000464451 MYO5CQ9NQX4 1742 aa18.02■□□□□ 0.48
SEC61A1-203ENST00000464451 ARHGAP5Q13017 1502 aa18■□□□□ 0.47
SEC61A1-203ENST00000464451 MAP3K1Q13233 1512 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms