RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 NISCHQ9Y2I1 1504 aa27.55■■■□□ 2
SEC61A1-203ENST00000464451 CCDC180Q9P1Z9 1646 aa24.35■■□□□ 1.49
SEC61A1-203ENST00000464451 ABCC9O60706 1549 aa23.85■■□□□ 1.41
SEC61A1-203ENST00000464451 DCAF8L2P0C7V8 631 aa23.15■■□□□ 1.3
SEC61A1-203ENST00000464451 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
SEC61A1-203ENST00000464451 RB1CC1Q8TDY2 1594 aa22.89■■□□□ 1.25
SEC61A1-203ENST00000464451 NACADO15069 1562 aa22.87■■□□□ 1.25
SEC61A1-203ENST00000464451 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
SEC61A1-203ENST00000464451 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
SEC61A1-203ENST00000464451 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
SEC61A1-203ENST00000464451 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
SEC61A1-203ENST00000464451 PABPN1Q86U42 306 aaKnown RBP eCLIP22.37■■□□□ 1.17
SEC61A1-203ENST00000464451 BICRAQ9NZM4 1560 aa22.22■■□□□ 1.15
SEC61A1-203ENST00000464451 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
SEC61A1-203ENST00000464451 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
SEC61A1-203ENST00000464451 EIF4G1Q04637 1599 aaKnown RBP21.63■■□□□ 1.05
SEC61A1-203ENST00000464451 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
SEC61A1-203ENST00000464451 CC2D2AQ9P2K1 1620 aa21.52■■□□□ 1.04
SEC61A1-203ENST00000464451 SMARCA4P51532 1647 aa21.34■■□□□ 1.01
SEC61A1-203ENST00000464451 BAZ1AQ9NRL2 1556 aaPredicted RBP21.32■■□□□ 1
SEC61A1-203ENST00000464451 MROH2BQ7Z745 1585 aa21.29■■□□□ 1
SEC61A1-203ENST00000464451 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
SEC61A1-203ENST00000464451 SMARCA2P51531 1590 aa21.13■□□□□ 0.97
SEC61A1-203ENST00000464451 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
SEC61A1-203ENST00000464451 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.97
SEC61A1-203ENST00000464451 WIZO95785 1651 aa21.08■□□□□ 0.96
SEC61A1-203ENST00000464451 PEG3Q9GZU2 1588 aa21.07■□□□□ 0.96
SEC61A1-203ENST00000464451 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
SEC61A1-203ENST00000464451 HMGXB3Q12766 1538 aa21.01■□□□□ 0.95
SEC61A1-203ENST00000464451 SUPT5HO00267 1087 aaKnown RBP20.98■□□□□ 0.95
SEC61A1-203ENST00000464451 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
SEC61A1-203ENST00000464451 NESP48681 1621 aa20.69■□□□□ 0.9
SEC61A1-203ENST00000464451 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
SEC61A1-203ENST00000464451 CADPSQ9ULU8 1353 aa20.55■□□□□ 0.88
SEC61A1-203ENST00000464451 LAMC3Q9Y6N6 1575 aa20.53■□□□□ 0.88
SEC61A1-203ENST00000464451 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
SEC61A1-203ENST00000464451 CFTRP13569 1480 aa20.44■□□□□ 0.86
SEC61A1-203ENST00000464451 PDS5BQ9NTI5 1447 aa20.41■□□□□ 0.86
SEC61A1-203ENST00000464451 KIF21AQ7Z4S6 1674 aa20.39■□□□□ 0.86
SEC61A1-203ENST00000464451 CHIC1Q5VXU3 224 aa20.37■□□□□ 0.85
SEC61A1-203ENST00000464451 FANCD2Q9BXW9 1451 aa20.34■□□□□ 0.85
SEC61A1-203ENST00000464451 CEP164Q9UPV0 1460 aa20.28■□□□□ 0.84
SEC61A1-203ENST00000464451 PRDM2Q13029 1718 aa20.26■□□□□ 0.83
SEC61A1-203ENST00000464451 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
SEC61A1-203ENST00000464451 MRC2Q9UBG0 1479 aa20.21■□□□□ 0.83
SEC61A1-203ENST00000464451 CUX2O14529 1486 aa20.14■□□□□ 0.81
SEC61A1-203ENST00000464451 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
SEC61A1-203ENST00000464451 WDR62O43379 1518 aa20.12■□□□□ 0.81
SEC61A1-203ENST00000464451 TOPBP1Q92547 1522 aa20.02■□□□□ 0.8
SEC61A1-203ENST00000464451 DNMBPQ6XZF7 1577 aa19.98■□□□□ 0.79
SEC61A1-203ENST00000464451 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
SEC61A1-203ENST00000464451 CUX1P39880 1505 aa19.94■□□□□ 0.78
SEC61A1-203ENST00000464451 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
SEC61A1-203ENST00000464451 POLA1P09884 1462 aaPredicted RBP19.87■□□□□ 0.77
SEC61A1-203ENST00000464451 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
SEC61A1-203ENST00000464451 RAD54L2Q9Y4B4 1467 aa19.84■□□□□ 0.77
SEC61A1-203ENST00000464451 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
SEC61A1-203ENST00000464451 IFT140Q96RY7 1462 aa19.83■□□□□ 0.76
SEC61A1-203ENST00000464451 SOGA1O94964 1423 aa19.81■□□□□ 0.76
SEC61A1-203ENST00000464451 ZNF608Q9ULD9 1512 aaPredicted RBP19.81■□□□□ 0.76
SEC61A1-203ENST00000464451 TOP2BQ02880 1626 aa19.77■□□□□ 0.76
SEC61A1-203ENST00000464451 TARBP1Q13395 1621 aaKnown RBP19.77■□□□□ 0.76
SEC61A1-203ENST00000464451 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
SEC61A1-203ENST00000464451 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
SEC61A1-203ENST00000464451 AQRO60306 1485 aaKnown RBP eCLIP19.72■□□□□ 0.752e-6■■■■■ 28
SEC61A1-203ENST00000464451 EIF4G3O43432 1585 aaKnown RBP19.69■□□□□ 0.74
SEC61A1-203ENST00000464451 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
SEC61A1-203ENST00000464451 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
SEC61A1-203ENST00000464451 WDR97A6NE52 1622 aa19.63■□□□□ 0.73
SEC61A1-203ENST00000464451 ABCA10Q8WWZ4 1543 aa19.62■□□□□ 0.73
SEC61A1-203ENST00000464451 GAPVD1Q14C86 1478 aa19.56■□□□□ 0.72
SEC61A1-203ENST00000464451 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
SEC61A1-203ENST00000464451 FBLN2P98095 1184 aa19.52■□□□□ 0.72
SEC61A1-203ENST00000464451 GRIN2BQ13224 1484 aa19.51■□□□□ 0.71
SEC61A1-203ENST00000464451 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
SEC61A1-203ENST00000464451 PBRM1Q86U86 1689 aa19.5■□□□□ 0.71
SEC61A1-203ENST00000464451 KIF27Q86VH2 1401 aa19.43■□□□□ 0.7
SEC61A1-203ENST00000464451 OSCARQ8IYS5 282 aa19.42■□□□□ 0.7
SEC61A1-203ENST00000464451 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
SEC61A1-203ENST00000464451 MAGI1Q96QZ7 1491 aaPredicted RBP19.42■□□□□ 0.7
SEC61A1-203ENST00000464451 CHD1O14646 1710 aa19.42■□□□□ 0.7
SEC61A1-203ENST00000464451 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
SEC61A1-203ENST00000464451 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
SEC61A1-203ENST00000464451 SYNJ2O15056 1496 aa19.37■□□□□ 0.69
SEC61A1-203ENST00000464451 PCGF6Q9BYE7 350 aa19.37■□□□□ 0.69
SEC61A1-203ENST00000464451 ERICH3Q5RHP9 1530 aa19.37■□□□□ 0.69
SEC61A1-203ENST00000464451 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
SEC61A1-203ENST00000464451 IGF1RP08069 1367 aa19.35■□□□□ 0.69
SEC61A1-203ENST00000464451 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
SEC61A1-203ENST00000464451 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
SEC61A1-203ENST00000464451 GRIN2AQ12879 1464 aa19.28■□□□□ 0.68
SEC61A1-203ENST00000464451 HRCP23327 699 aa19.26■□□□□ 0.67
SEC61A1-203ENST00000464451 CARMIL1Q5VZK9 1371 aa19.24■□□□□ 0.67
SEC61A1-203ENST00000464451 CUL7Q14999 1698 aa19.22■□□□□ 0.67
SEC61A1-203ENST00000464451 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
SEC61A1-203ENST00000464451 CEP170Q5SW79 1584 aa19.2■□□□□ 0.66
SEC61A1-203ENST00000464451 CLASP1Q7Z460 1538 aa19.17■□□□□ 0.66
SEC61A1-203ENST00000464451 CSRNP3Q8WYN3 585 aa19.16■□□□□ 0.66
SEC61A1-203ENST00000464451 NUP160Q12769 1436 aa19.16■□□□□ 0.66
SEC61A1-203ENST00000464451 RAPGEF2Q9Y4G8 1499 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms