RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
CTDSP1-206ENST00000464255 CARMIL1Q5VZK9 1371 aa22.62■■□□□ 1.21
CTDSP1-206ENST00000464255 CUL7Q14999 1698 aa22.61■■□□□ 1.21
CTDSP1-206ENST00000464255 KIAA0586Q9BVV6 1533 aa22.59■■□□□ 1.21
CTDSP1-206ENST00000464255 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
CTDSP1-206ENST00000464255 ADCY10Q96PN6 1610 aa22.35■■□□□ 1.17
CTDSP1-206ENST00000464255 IQGAP2Q13576 1575 aa22.35■■□□□ 1.17
CTDSP1-206ENST00000464255 PTPRGP23470 1445 aa22.33■■□□□ 1.17
CTDSP1-206ENST00000464255 DISP1Q96F81 1524 aa22.31■■□□□ 1.16
CTDSP1-206ENST00000464255 TNIKQ9UKE5 1360 aa22.3■■□□□ 1.16
CTDSP1-206ENST00000464255 CARMIL2Q6F5E8 1435 aa22.3■■□□□ 1.16
CTDSP1-206ENST00000464255 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
CTDSP1-206ENST00000464255 NPM1P06748 294 aaKnown RBP eCLIP22.28■■□□□ 1.16
CTDSP1-206ENST00000464255 UGGT2Q9NYU1 1516 aa22.27■■□□□ 1.16
CTDSP1-206ENST00000464255 MAPKBP1O60336 1514 aa22.26■■□□□ 1.15
CTDSP1-206ENST00000464255 KIF13AQ9H1H9 1805 aa22.26■■□□□ 1.15
CTDSP1-206ENST00000464255 TTBK1Q5TCY1 1321 aaPredicted RBP22.25■■□□□ 1.15
CTDSP1-206ENST00000464255 ABCC10Q5T3U5 1492 aa22.24■■□□□ 1.15
CTDSP1-206ENST00000464255 FAM69CQ0P6D2 419 aa22.22■■□□□ 1.15
CTDSP1-206ENST00000464255 UHRF1BP1LA0JNW5 1464 aa22.18■■□□□ 1.14
CTDSP1-206ENST00000464255 ABCC2Q92887 1545 aa22.17■■□□□ 1.14
CTDSP1-206ENST00000464255 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
CTDSP1-206ENST00000464255 UACAQ9BZF9 1416 aa22.16■■□□□ 1.14
CTDSP1-206ENST00000464255 DIP2BQ9P265 1576 aa22.16■■□□□ 1.14
CTDSP1-206ENST00000464255 KIAA0556O60303 1618 aa22.15■■□□□ 1.14
CTDSP1-206ENST00000464255 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
CTDSP1-206ENST00000464255 ASXL2Q76L83 1435 aa22.08■■□□□ 1.13
CTDSP1-206ENST00000464255 KDM5BQ9UGL1 1544 aa22.08■■□□□ 1.13
CTDSP1-206ENST00000464255 GOLGA3Q08378 1498 aa22.05■■□□□ 1.12
CTDSP1-206ENST00000464255 PLB1Q6P1J6 1458 aa22.04■■□□□ 1.12
CTDSP1-206ENST00000464255 EEA1Q15075 1411 aa22.04■■□□□ 1.12
CTDSP1-206ENST00000464255 CHIC1Q5VXU3 224 aa22.01■■□□□ 1.11
CTDSP1-206ENST00000464255 FAM9AQ8IZU1 332 aaPredicted RBP21.99■■□□□ 1.11
CTDSP1-206ENST00000464255 ABCA8O94911 1581 aa21.98■■□□□ 1.11
CTDSP1-206ENST00000464255 GLI2P10070 1586 aa21.98■■□□□ 1.11
CTDSP1-206ENST00000464255 ZCCHC11Q5TAX3 1644 aaKnown RBP21.97■■□□□ 1.11
CTDSP1-206ENST00000464255 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
CTDSP1-206ENST00000464255 EPRSP07814 1512 aaKnown RBP21.96■■□□□ 1.11
CTDSP1-206ENST00000464255 TSPOAP1O95153 1857 aa21.94■■□□□ 1.1
CTDSP1-206ENST00000464255 PPRC1Q5VV67 1664 aaKnown RBP21.91■■□□□ 1.1
CTDSP1-206ENST00000464255 SAMD9Q5K651 1589 aa21.91■■□□□ 1.1
CTDSP1-206ENST00000464255 WDR7Q9Y4E6 1490 aa21.88■■□□□ 1.09
CTDSP1-206ENST00000464255 KDM6BO15054 1643 aa21.85■■□□□ 1.09
CTDSP1-206ENST00000464255 MAP3K4Q9Y6R4 1608 aa21.85■■□□□ 1.09
CTDSP1-206ENST00000464255 KIF21BO75037 1637 aa21.84■■□□□ 1.09
CTDSP1-206ENST00000464255 ATP10BO94823 1461 aa21.83■■□□□ 1.09
CTDSP1-206ENST00000464255 COL17A1Q9UMD9 1497 aaPredicted RBP21.83■■□□□ 1.08
CTDSP1-206ENST00000464255 RANGAP1P46060 587 aaPredicted RBP21.82■■□□□ 1.08
CTDSP1-206ENST00000464255 ARID3CA6NKF2 412 aa21.81■■□□□ 1.08
CTDSP1-206ENST00000464255 KCNH8Q96L42 1107 aa21.81■■□□□ 1.08
CTDSP1-206ENST00000464255 FHOD3Q2V2M9 1422 aa21.78■■□□□ 1.08
CTDSP1-206ENST00000464255 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
CTDSP1-206ENST00000464255 CD109Q6YHK3 1445 aa21.73■■□□□ 1.07
CTDSP1-206ENST00000464255 NUP153P49790 1475 aaKnown RBP21.73■■□□□ 1.07
CTDSP1-206ENST00000464255 TEX14Q8IWB6 1497 aa21.73■■□□□ 1.07
CTDSP1-206ENST00000464255 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
CTDSP1-206ENST00000464255 RAPGEF6Q8TEU7 1601 aa21.73■■□□□ 1.07
CTDSP1-206ENST00000464255 MAGI3Q5TCQ9 1506 aa21.72■■□□□ 1.07
CTDSP1-206ENST00000464255 KDM4FA0A1W2PPD8 638 aa21.69■■□□□ 1.06
CTDSP1-206ENST00000464255 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
CTDSP1-206ENST00000464255 EFCAB5A4FU69 1503 aa21.69■■□□□ 1.06
CTDSP1-206ENST00000464255 CFAP43Q8NDM7 1665 aa21.68■■□□□ 1.06
CTDSP1-206ENST00000464255 ARHGAP35Q9NRY4 1499 aa21.61■■□□□ 1.05
CTDSP1-206ENST00000464255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.61■■□□□ 1.05
CTDSP1-206ENST00000464255 HNRNPUL2Q1KMD3 747 aaKnown RBP21.61■■□□□ 1.05
CTDSP1-206ENST00000464255 ABCA9Q8IUA7 1624 aa21.6■■□□□ 1.05
CTDSP1-206ENST00000464255 PLEKHD1A6NEE1 506 aa21.56■■□□□ 1.04
CTDSP1-206ENST00000464255 ARAP3Q8WWN8 1544 aa21.55■■□□□ 1.04
CTDSP1-206ENST00000464255 CDK13Q14004 1512 aaKnown RBP21.51■■□□□ 1.03
CTDSP1-206ENST00000464255 FMN1Q68DA7 1419 aa21.51■■□□□ 1.03
CTDSP1-206ENST00000464255 PHLDB1Q86UU1 1377 aa21.5■■□□□ 1.03
CTDSP1-206ENST00000464255 ADGRL1O94910 1474 aa21.47■■□□□ 1.03
CTDSP1-206ENST00000464255 NEO1Q92859 1461 aa21.47■■□□□ 1.03
CTDSP1-206ENST00000464255 RAPGEF3O95398 923 aa21.47■■□□□ 1.03
CTDSP1-206ENST00000464255 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.46■■□□□ 1.033e-9■■■■■ 48.7
CTDSP1-206ENST00000464255 ATP1B4Q9UN42 357 aaPredicted RBP21.43■■□□□ 1.02
CTDSP1-206ENST00000464255 TTC37Q6PGP7 1564 aa21.41■■□□□ 1.02
CTDSP1-206ENST00000464255 HECW1Q76N89 1606 aa21.4■■□□□ 1.02
CTDSP1-206ENST00000464255 FRMPD1Q5SYB0 1578 aa21.39■■□□□ 1.01
CTDSP1-206ENST00000464255 AKNAQ7Z591 1439 aa21.38■■□□□ 1.01
CTDSP1-206ENST00000464255 FANCAO15360 1455 aa21.37■■□□□ 1.01
CTDSP1-206ENST00000464255 LRRIQ1Q96JM4 1722 aa21.36■■□□□ 1.01
CTDSP1-206ENST00000464255 PLCH2O75038 1416 aa21.35■■□□□ 1.01
CTDSP1-206ENST00000464255 CASKIN1Q8WXD9 1431 aa21.35■■□□□ 1.01
CTDSP1-206ENST00000464255 CDK11AQ9UQ88 783 aaPredicted RBP21.34■■□□□ 1.01
CTDSP1-206ENST00000464255 CLIP1P30622 1438 aa21.32■■□□□ 1
CTDSP1-206ENST00000464255 TROQ12816 1431 aaPredicted RBP21.32■■□□□ 1
CTDSP1-206ENST00000464255 DENND4BO75064 1496 aaPredicted RBP21.32■■□□□ 1
CTDSP1-206ENST00000464255 KIF14Q15058 1648 aa21.3■■□□□ 1
CTDSP1-206ENST00000464255 PCF11O94913 1555 aaKnown RBP21.3■■□□□ 1
CTDSP1-206ENST00000464255 RICTORQ6R327 1708 aa21.29■■□□□ 1
CTDSP1-206ENST00000464255 CFAP74Q9C0B2 1584 aa21.27■□□□□ 0.99
CTDSP1-206ENST00000464255 EFCAB2Q5VUJ9 269 aa21.25■□□□□ 0.99
CTDSP1-206ENST00000464255 SCAPERQ9BY12 1400 aa21.25■□□□□ 0.99
CTDSP1-206ENST00000464255 FYCO1Q9BQS8 1478 aa21.24■□□□□ 0.99
CTDSP1-206ENST00000464255 CCDC18Q5T9S5 1454 aa21.23■□□□□ 0.99
CTDSP1-206ENST00000464255 ZMYM4Q5VZL5 1548 aa21.22■□□□□ 0.99
CTDSP1-206ENST00000464255 POGZQ7Z3K3 1410 aa21.21■□□□□ 0.99
CTDSP1-206ENST00000464255 YEATS2Q9ULM3 1422 aa21.21■□□□□ 0.99
CTDSP1-206ENST00000464255 ARHGEF40Q8TER5 1519 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms