RNA–Protein interactions for RNA: ENST00000463634.6

PRPF4B-203, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 2,590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-203ENST00000463634 FHOD3Q2V2M9 1422 aa12.18□□□□□ -0.46
PRPF4B-203ENST00000463634 MRC2Q9UBG0 1479 aa12.18□□□□□ -0.46
PRPF4B-203ENST00000463634 TIAM1Q13009 1591 aa12.17□□□□□ -0.46
PRPF4B-203ENST00000463634 PCF11O94913 1555 aaKnown RBP12.17□□□□□ -0.46
PRPF4B-203ENST00000463634 FHAD1B1AJZ9 1412 aa12.16□□□□□ -0.46
PRPF4B-203ENST00000463634 EFCAB5A4FU69 1503 aa12.15□□□□□ -0.46
PRPF4B-203ENST00000463634 RRBP1Q9P2E9 1410 aaKnown RBP12.15□□□□□ -0.46
PRPF4B-203ENST00000463634 MAP3K1Q13233 1512 aa12.14□□□□□ -0.47
PRPF4B-203ENST00000463634 ATP1B4Q9UN42 357 aaPredicted RBP12.14□□□□□ -0.47
PRPF4B-203ENST00000463634 AQRO60306 1485 aaKnown RBP eCLIP12.13□□□□□ -0.475e-8■■■■■ 92.2
PRPF4B-203ENST00000463634 LRRC9Q6ZRR7 1453 aa12.12□□□□□ -0.47
PRPF4B-203ENST00000463634 PBRM1Q86U86 1689 aa12.12□□□□□ -0.47
PRPF4B-203ENST00000463634 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
PRPF4B-203ENST00000463634 CFAP43Q8NDM7 1665 aa12.11□□□□□ -0.47
PRPF4B-203ENST00000463634 FYCO1Q9BQS8 1478 aa12.1□□□□□ -0.47
PRPF4B-203ENST00000463634 WDR62O43379 1518 aa12.09□□□□□ -0.47
PRPF4B-203ENST00000463634 MYT1Q01538 1121 aa12.09□□□□□ -0.47
PRPF4B-203ENST00000463634 CASKIN1Q8WXD9 1431 aa12.09□□□□□ -0.47
PRPF4B-203ENST00000463634 SAMD9Q5K651 1589 aa12.09□□□□□ -0.47
PRPF4B-203ENST00000463634 ZNF608Q9ULD9 1512 aaPredicted RBP12.08□□□□□ -0.48
PRPF4B-203ENST00000463634 ITGAEP38570 1179 aa12.08□□□□□ -0.48
PRPF4B-203ENST00000463634 PHLDB1Q86UU1 1377 aa12.07□□□□□ -0.48
PRPF4B-203ENST00000463634 ADAMTS12P58397 1594 aa12.07□□□□□ -0.48
PRPF4B-203ENST00000463634 FMN1Q68DA7 1419 aa12.07□□□□□ -0.48
PRPF4B-203ENST00000463634 ERCC6Q03468 1493 aa12.06□□□□□ -0.48
PRPF4B-203ENST00000463634 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
PRPF4B-203ENST00000463634 IFT140Q96RY7 1462 aa12.06□□□□□ -0.48
PRPF4B-203ENST00000463634 GRIN2BQ13224 1484 aa12.06□□□□□ -0.48
PRPF4B-203ENST00000463634 DHX57Q6P158 1386 aaKnown RBP12.02□□□□□ -0.48
PRPF4B-203ENST00000463634 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
PRPF4B-203ENST00000463634 IQGAP2Q13576 1575 aa12.01□□□□□ -0.49
PRPF4B-203ENST00000463634 THOC2Q8NI27 1593 aaKnown RBP12.01□□□□□ -0.49
PRPF4B-203ENST00000463634 EIF4G3O43432 1585 aaKnown RBP12□□□□□ -0.49
PRPF4B-203ENST00000463634 FAM50AQ14320 339 aaKnown RBP12□□□□□ -0.49
PRPF4B-203ENST00000463634 MTUS2Q5JR59 1369 aa11.97□□□□□ -0.49
PRPF4B-203ENST00000463634 RAB3GAP2Q9H2M9 1393 aa11.96□□□□□ -0.49
PRPF4B-203ENST00000463634 DIEXFQ68CQ4 756 aaKnown RBP11.95□□□□□ -0.5
PRPF4B-203ENST00000463634 CLSPNQ9HAW4 1339 aa11.95□□□□□ -0.5
PRPF4B-203ENST00000463634 ZNF316A6NFI3 1004 aaPredicted RBP11.94□□□□□ -0.5
PRPF4B-203ENST00000463634 GRIN2AQ12879 1464 aa11.94□□□□□ -0.5
PRPF4B-203ENST00000463634 UGGT2Q9NYU1 1516 aa11.93□□□□□ -0.5
PRPF4B-203ENST00000463634 FGD6Q6ZV73 1430 aa11.93□□□□□ -0.5
PRPF4B-203ENST00000463634 MAGI3Q5TCQ9 1506 aa11.92□□□□□ -0.5
PRPF4B-203ENST00000463634 SETD5Q9C0A6 1442 aa11.92□□□□□ -0.5
PRPF4B-203ENST00000463634 KIAA0586Q9BVV6 1533 aa11.92□□□□□ -0.5
PRPF4B-203ENST00000463634 NCOA2Q15596 1464 aa11.92□□□□□ -0.5
PRPF4B-203ENST00000463634 HECW1Q76N89 1606 aa11.91□□□□□ -0.5
PRPF4B-203ENST00000463634 EHBP1L1Q8N3D4 1523 aa11.91□□□□□ -0.5
PRPF4B-203ENST00000463634 ARID3CA6NKF2 412 aa11.9□□□□□ -0.5
PRPF4B-203ENST00000463634 CCDC18Q5T9S5 1454 aa11.9□□□□□ -0.5
PRPF4B-203ENST00000463634 MAGI1Q96QZ7 1491 aaPredicted RBP11.9□□□□□ -0.5
PRPF4B-203ENST00000463634 SUPT6HQ7KZ85 1726 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-203ENST00000463634 DISP1Q96F81 1524 aa11.89□□□□□ -0.51
PRPF4B-203ENST00000463634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.89□□□□□ -0.51
PRPF4B-203ENST00000463634 EPRSP07814 1512 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-203ENST00000463634 CDK13Q14004 1512 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-203ENST00000463634 KIAA0556O60303 1618 aa11.89□□□□□ -0.51
PRPF4B-203ENST00000463634 FBLN2P98095 1184 aa11.88□□□□□ -0.51
PRPF4B-203ENST00000463634 CHMP7Q8WUX9 453 aaPredicted RBP11.88□□□□□ -0.51
PRPF4B-203ENST00000463634 MYOM3Q5VTT5 1437 aa11.88□□□□□ -0.51
PRPF4B-203ENST00000463634 SYNJ2O15056 1496 aa11.88□□□□□ -0.51
PRPF4B-203ENST00000463634 MAPKBP1O60336 1514 aa11.88□□□□□ -0.51
PRPF4B-203ENST00000463634 CEP170Q5SW79 1584 aa11.87□□□□□ -0.51
PRPF4B-203ENST00000463634 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
PRPF4B-203ENST00000463634 PTPRKQ15262 1439 aa11.85□□□□□ -0.51
PRPF4B-203ENST00000463634 PTPN23Q9H3S7 1636 aa11.83□□□□□ -0.52
PRPF4B-203ENST00000463634 NUP153P49790 1475 aaKnown RBP11.82□□□□□ -0.52
PRPF4B-203ENST00000463634 NUP160Q12769 1436 aa11.81□□□□□ -0.52
PRPF4B-203ENST00000463634 RAPGEF6Q8TEU7 1601 aa11.81□□□□□ -0.52
PRPF4B-203ENST00000463634 HFM1A2PYH4 1435 aa11.79□□□□□ -0.52
PRPF4B-203ENST00000463634 SIN3AQ96ST3 1273 aa11.78□□□□□ -0.52
PRPF4B-203ENST00000463634 JPH4Q96JJ6 628 aa11.78□□□□□ -0.52
PRPF4B-203ENST00000463634 PLB1Q6P1J6 1458 aa11.78□□□□□ -0.52
PRPF4B-203ENST00000463634 TCOF1Q13428 1488 aaKnown RBP11.77□□□□□ -0.52
PRPF4B-203ENST00000463634 NAIPQ13075 1403 aa11.77□□□□□ -0.53
PRPF4B-203ENST00000463634 NEUROD1Q13562 356 aa11.77□□□□□ -0.53
PRPF4B-203ENST00000463634 CHIC2Q9UKJ5 165 aa11.75□□□□□ -0.53
PRPF4B-203ENST00000463634 CARMIL2Q6F5E8 1435 aa11.75□□□□□ -0.53
PRPF4B-203ENST00000463634 MIER1Q8N108 512 aa11.74□□□□□ -0.53
PRPF4B-203ENST00000463634 MIA2Q96PC5 1412 aa11.74□□□□□ -0.53
PRPF4B-203ENST00000463634 RRP7BPQ9NSQ0 103 aa11.74□□□□□ -0.53
PRPF4B-203ENST00000463634 PRG4Q92954 1404 aaPredicted RBP11.73□□□□□ -0.53
PRPF4B-203ENST00000463634 UACAQ9BZF9 1416 aa11.73□□□□□ -0.53
PRPF4B-203ENST00000463634 CDK11AQ9UQ88 783 aaPredicted RBP11.72□□□□□ -0.53
PRPF4B-203ENST00000463634 ZNF644Q9H582 1327 aaPredicted RBP11.71□□□□□ -0.54
PRPF4B-203ENST00000463634 TROQ12816 1431 aaPredicted RBP11.7□□□□□ -0.54
PRPF4B-203ENST00000463634 GCC2Q8IWJ2 1684 aa11.7□□□□□ -0.54
PRPF4B-203ENST00000463634 KDM6BO15054 1643 aa11.69□□□□□ -0.54
PRPF4B-203ENST00000463634 KIF14Q15058 1648 aa11.69□□□□□ -0.54
PRPF4B-203ENST00000463634 CHD1O14646 1710 aa11.69□□□□□ -0.54
PRPF4B-203ENST00000463634 ABCA8O94911 1581 aa11.68□□□□□ -0.54
PRPF4B-203ENST00000463634 DAPK1P53355 1430 aa11.67□□□□□ -0.54
PRPF4B-203ENST00000463634 AKNAQ7Z591 1439 aa11.67□□□□□ -0.54
PRPF4B-203ENST00000463634 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-203ENST00000463634 ABCC5O15440 1437 aa11.66□□□□□ -0.54
PRPF4B-203ENST00000463634 DNMT1P26358 1616 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-203ENST00000463634 YTHDC1Q96MU7 727 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-203ENST00000463634 TIMELESSQ9UNS1 1208 aa11.66□□□□□ -0.54
PRPF4B-203ENST00000463634 ACIN1Q9UKV3 1341 aaKnown RBP11.65□□□□□ -0.54
PRPF4B-203ENST00000463634 ADCY10Q96PN6 1610 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms