RNA–Protein interactions for RNA: ENST00000463596.5

APTX-211, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-211ENST00000463596 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
APTX-211ENST00000463596 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
APTX-211ENST00000463596 PRXQ9BXM0 1461 aa23.53■■□□□ 1.36
APTX-211ENST00000463596 KIAA0586Q9BVV6 1533 aa23.52■■□□□ 1.36
APTX-211ENST00000463596 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
APTX-211ENST00000463596 JPH4Q96JJ6 628 aa23.42■■□□□ 1.34
APTX-211ENST00000463596 CTTNBP2Q8WZ74 1663 aa23.4■■□□□ 1.34
APTX-211ENST00000463596 IQGAP2Q13576 1575 aa23.4■■□□□ 1.34
APTX-211ENST00000463596 KIF21BO75037 1637 aa23.38■■□□□ 1.33
APTX-211ENST00000463596 ARAP1Q96P48 1450 aa23.37■■□□□ 1.33
APTX-211ENST00000463596 PRG4Q92954 1404 aaPredicted RBP23.35■■□□□ 1.33
APTX-211ENST00000463596 UGGT2Q9NYU1 1516 aa23.31■■□□□ 1.32
APTX-211ENST00000463596 ERCC6L2Q5T890 1561 aa23.3■■□□□ 1.32
APTX-211ENST00000463596 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
APTX-211ENST00000463596 CARMIL2Q6F5E8 1435 aa23.27■■□□□ 1.32
APTX-211ENST00000463596 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
APTX-211ENST00000463596 CYB5RLQ6IPT4 315 aa23.26■■□□□ 1.31
APTX-211ENST00000463596 GOLGA3Q08378 1498 aa23.21■■□□□ 1.31
APTX-211ENST00000463596 DISP1Q96F81 1524 aa23.19■■□□□ 1.3
APTX-211ENST00000463596 KIAA0556O60303 1618 aa23.16■■□□□ 1.3
APTX-211ENST00000463596 TNIKQ9UKE5 1360 aa23.16■■□□□ 1.3
APTX-211ENST00000463596 PTPRGP23470 1445 aa23.11■■□□□ 1.29
APTX-211ENST00000463596 SAMD9Q5K651 1589 aa23.08■■□□□ 1.29
APTX-211ENST00000463596 UBTFP17480 764 aaKnown RBP23.05■■□□□ 1.28
APTX-211ENST00000463596 EFCAB5A4FU69 1503 aa23.04■■□□□ 1.28
APTX-211ENST00000463596 UHRF1BP1LA0JNW5 1464 aa23.02■■□□□ 1.27
APTX-211ENST00000463596 ADCY10Q96PN6 1610 aa23■■□□□ 1.27
APTX-211ENST00000463596 UACAQ9BZF9 1416 aa22.98■■□□□ 1.27
APTX-211ENST00000463596 ABCC2Q92887 1545 aa22.95■■□□□ 1.26
APTX-211ENST00000463596 NPM1P06748 294 aaKnown RBP eCLIP22.93■■□□□ 1.26
APTX-211ENST00000463596 ABCA8O94911 1581 aa22.92■■□□□ 1.26
APTX-211ENST00000463596 MAPKBP1O60336 1514 aa22.91■■□□□ 1.26
APTX-211ENST00000463596 KDM5BQ9UGL1 1544 aa22.87■■□□□ 1.25
APTX-211ENST00000463596 TTBK1Q5TCY1 1321 aaPredicted RBP22.85■■□□□ 1.25
APTX-211ENST00000463596 EHMT2Q96KQ7 1210 aa22.84■■□□□ 1.25
APTX-211ENST00000463596 PLB1Q6P1J6 1458 aa22.84■■□□□ 1.25
APTX-211ENST00000463596 ARHGAP35Q9NRY4 1499 aa22.84■■□□□ 1.25
APTX-211ENST00000463596 P3H3Q8IVL6 736 aa22.83■■□□□ 1.25
APTX-211ENST00000463596 FHOD3Q2V2M9 1422 aa22.82■■□□□ 1.24
APTX-211ENST00000463596 RAPGEF6Q8TEU7 1601 aa22.82■■□□□ 1.24
APTX-211ENST00000463596 FMN1Q68DA7 1419 aa22.81■■□□□ 1.24
APTX-211ENST00000463596 ZCCHC11Q5TAX3 1644 aaKnown RBP22.79■■□□□ 1.24
APTX-211ENST00000463596 RANGAP1P46060 587 aaPredicted RBP22.79■■□□□ 1.24
APTX-211ENST00000463596 CLIP1P30622 1438 aa22.75■■□□□ 1.23
APTX-211ENST00000463596 ABCC10Q5T3U5 1492 aa22.74■■□□□ 1.23
APTX-211ENST00000463596 KIF13AQ9H1H9 1805 aa22.73■■□□□ 1.23
APTX-211ENST00000463596 TRHP20396 242 aaPredicted RBP22.73■■□□□ 1.23
APTX-211ENST00000463596 ASXL2Q76L83 1435 aa22.71■■□□□ 1.23
APTX-211ENST00000463596 DIP2BQ9P265 1576 aa22.7■■□□□ 1.22
APTX-211ENST00000463596 NUP153P49790 1475 aaKnown RBP22.69■■□□□ 1.22
APTX-211ENST00000463596 ATP10BO94823 1461 aa22.68■■□□□ 1.22
APTX-211ENST00000463596 HECW1Q76N89 1606 aa22.67■■□□□ 1.22
APTX-211ENST00000463596 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
APTX-211ENST00000463596 GLI2P10070 1586 aa22.67■■□□□ 1.22
APTX-211ENST00000463596 WDR7Q9Y4E6 1490 aa22.66■■□□□ 1.22
APTX-211ENST00000463596 LOC105371045A0A1W2PR82 267 aa22.63■■□□□ 1.21
APTX-211ENST00000463596 CASKIN1Q8WXD9 1431 aa22.61■■□□□ 1.21
APTX-211ENST00000463596 EPRSP07814 1512 aaKnown RBP22.61■■□□□ 1.21
APTX-211ENST00000463596 FAM69CQ0P6D2 419 aa22.6■■□□□ 1.21
APTX-211ENST00000463596 FYCO1Q9BQS8 1478 aa22.58■■□□□ 1.21
APTX-211ENST00000463596 PCF11O94913 1555 aaKnown RBP22.55■■□□□ 1.2
APTX-211ENST00000463596 CCDC18Q5T9S5 1454 aa22.55■■□□□ 1.2
APTX-211ENST00000463596 CFAP43Q8NDM7 1665 aa22.54■■□□□ 1.2
APTX-211ENST00000463596 MAP3K4Q9Y6R4 1608 aa22.53■■□□□ 1.2
APTX-211ENST00000463596 PLEKHD1A6NEE1 506 aa22.52■■□□□ 1.2
APTX-211ENST00000463596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.51■■□□□ 1.19
APTX-211ENST00000463596 HNRNPUL2Q1KMD3 747 aaKnown RBP22.51■■□□□ 1.19
APTX-211ENST00000463596 CDK11AQ9UQ88 783 aaPredicted RBP22.51■■□□□ 1.19
APTX-211ENST00000463596 LRRIQ1Q96JM4 1722 aa22.5■■□□□ 1.19
APTX-211ENST00000463596 CDK13Q14004 1512 aaKnown RBP22.49■■□□□ 1.19
APTX-211ENST00000463596 ARID3CA6NKF2 412 aa22.48■■□□□ 1.19
APTX-211ENST00000463596 ABCA9Q8IUA7 1624 aa22.48■■□□□ 1.19
APTX-211ENST00000463596 TSPOAP1O95153 1857 aa22.46■■□□□ 1.19
APTX-211ENST00000463596 ATP1B4Q9UN42 357 aaPredicted RBP22.46■■□□□ 1.19
APTX-211ENST00000463596 PPRC1Q5VV67 1664 aaKnown RBP22.44■■□□□ 1.18
APTX-211ENST00000463596 TEX14Q8IWB6 1497 aa22.44■■□□□ 1.18
APTX-211ENST00000463596 KCNH8Q96L42 1107 aa22.44■■□□□ 1.18
APTX-211ENST00000463596 MAGI3Q5TCQ9 1506 aa22.44■■□□□ 1.18
APTX-211ENST00000463596 VPS8Q8N3P4 1428 aa22.44■■□□□ 1.18
APTX-211ENST00000463596 CD109Q6YHK3 1445 aa22.41■■□□□ 1.18
APTX-211ENST00000463596 TROQ12816 1431 aaPredicted RBP22.4■■□□□ 1.18
APTX-211ENST00000463596 KIF14Q15058 1648 aa22.36■■□□□ 1.17
APTX-211ENST00000463596 PHLDB1Q86UU1 1377 aa22.35■■□□□ 1.17
APTX-211ENST00000463596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.35■■□□□ 1.17
APTX-211ENST00000463596 MAP3K1Q13233 1512 aa22.33■■□□□ 1.16
APTX-211ENST00000463596 ARAP3Q8WWN8 1544 aa22.31■■□□□ 1.16
APTX-211ENST00000463596 KDM6BO15054 1643 aa22.3■■□□□ 1.16
APTX-211ENST00000463596 TTC37Q6PGP7 1564 aa22.29■■□□□ 1.16
APTX-211ENST00000463596 CFAP74Q9C0B2 1584 aa22.29■■□□□ 1.16
APTX-211ENST00000463596 NEO1Q92859 1461 aa22.29■■□□□ 1.16
APTX-211ENST00000463596 MYO5CQ9NQX4 1742 aa22.29■■□□□ 1.16
APTX-211ENST00000463596 TIAM1Q13009 1591 aa22.27■■□□□ 1.16
APTX-211ENST00000463596 EHBP1L1Q8N3D4 1523 aa22.27■■□□□ 1.16
APTX-211ENST00000463596 MTUS2Q5JR59 1369 aa22.25■■□□□ 1.15
APTX-211ENST00000463596 PLCH2O75038 1416 aa22.25■■□□□ 1.15
APTX-211ENST00000463596 FANCAO15360 1455 aa22.2■■□□□ 1.14
APTX-211ENST00000463596 PREX2Q70Z35 1606 aa22.19■■□□□ 1.14
APTX-211ENST00000463596 CDC42BPAQ5VT25 1732 aa22.17■■□□□ 1.14
APTX-211ENST00000463596 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
APTX-211ENST00000463596 CDC42BPBQ9Y5S2 1711 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms