RNA–Protein interactions for RNA: ENST00000463596.5

APTX-211, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-211ENST00000463596 NISCHQ9Y2I1 1504 aa34.01■■■■□ 3.04
APTX-211ENST00000463596 CCDC180Q9P1Z9 1646 aa30.3■■■□□ 2.44
APTX-211ENST00000463596 ABCC9O60706 1549 aa29.26■■■□□ 2.27
APTX-211ENST00000463596 NACADO15069 1562 aa28.42■■■□□ 2.14
APTX-211ENST00000463596 RB1CC1Q8TDY2 1594 aa28.39■■■□□ 2.13
APTX-211ENST00000463596 MYO15BQ96JP2 1530 aa28.38■■■□□ 2.13
APTX-211ENST00000463596 ZCCHC6Q5VYS8 1495 aaKnown RBP28.37■■■□□ 2.13
APTX-211ENST00000463596 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
APTX-211ENST00000463596 DCAF8L2P0C7V8 631 aa28.15■■■□□ 2.1
APTX-211ENST00000463596 AEBP2Q6ZN18 517 aaPredicted RBP27.77■■■□□ 2.04
APTX-211ENST00000463596 UNC13AQ9UPW8 1703 aa27.72■■■□□ 2.03
APTX-211ENST00000463596 SCRIBQ14160 1630 aa27.45■■□□□ 1.99
APTX-211ENST00000463596 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.99
APTX-211ENST00000463596 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
APTX-211ENST00000463596 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
APTX-211ENST00000463596 EIF4G1Q04637 1599 aaKnown RBP26.73■■□□□ 1.87
APTX-211ENST00000463596 DNAJC5BQ9UF47 199 aa26.66■■□□□ 1.86
APTX-211ENST00000463596 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
APTX-211ENST00000463596 BAZ1AQ9NRL2 1556 aaPredicted RBP26.39■■□□□ 1.82
APTX-211ENST00000463596 CECR2Q9BXF3 1484 aa26.38■■□□□ 1.81
APTX-211ENST00000463596 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
APTX-211ENST00000463596 SMARCA2P51531 1590 aa26.22■■□□□ 1.79
APTX-211ENST00000463596 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
APTX-211ENST00000463596 NCAPD3P42695 1498 aa26.18■■□□□ 1.78
APTX-211ENST00000463596 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
APTX-211ENST00000463596 MROH2BQ7Z745 1585 aa26.14■■□□□ 1.78
APTX-211ENST00000463596 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
APTX-211ENST00000463596 CHIC1Q5VXU3 224 aa25.97■■□□□ 1.75
APTX-211ENST00000463596 BAZ1BQ9UIG0 1483 aaKnown RBP25.96■■□□□ 1.75
APTX-211ENST00000463596 RSF1Q96T23 1441 aaPredicted RBP25.92■■□□□ 1.74
APTX-211ENST00000463596 WIZO95785 1651 aa25.88■■□□□ 1.73
APTX-211ENST00000463596 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
APTX-211ENST00000463596 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
APTX-211ENST00000463596 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.65
APTX-211ENST00000463596 NESP48681 1621 aa25.35■■□□□ 1.65
APTX-211ENST00000463596 CCDC88BA6NC98 1476 aa25.32■■□□□ 1.64
APTX-211ENST00000463596 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
APTX-211ENST00000463596 CFTRP13569 1480 aa25.29■■□□□ 1.64
APTX-211ENST00000463596 ERCC6Q03468 1493 aa25.27■■□□□ 1.64
APTX-211ENST00000463596 SUPT5HO00267 1087 aaKnown RBP25.23■■□□□ 1.63
APTX-211ENST00000463596 PRDM2Q13029 1718 aa25.21■■□□□ 1.63
APTX-211ENST00000463596 KIF21AQ7Z4S6 1674 aa25.15■■□□□ 1.62
APTX-211ENST00000463596 FANCD2Q9BXW9 1451 aa25.07■■□□□ 1.6
APTX-211ENST00000463596 CUX2O14529 1486 aa25.06■■□□□ 1.6
APTX-211ENST00000463596 THOC2Q8NI27 1593 aaKnown RBP25.06■■□□□ 1.6
APTX-211ENST00000463596 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
APTX-211ENST00000463596 MRC2Q9UBG0 1479 aa24.99■■□□□ 1.59
APTX-211ENST00000463596 WDR62O43379 1518 aa24.92■■□□□ 1.58
APTX-211ENST00000463596 ABCC8Q09428 1581 aa24.83■■□□□ 1.56
APTX-211ENST00000463596 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
APTX-211ENST00000463596 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
APTX-211ENST00000463596 TOPBP1Q92547 1522 aa24.7■■□□□ 1.54
APTX-211ENST00000463596 IFT140Q96RY7 1462 aa24.55■■□□□ 1.52
APTX-211ENST00000463596 CUX1P39880 1505 aa24.53■■□□□ 1.52
APTX-211ENST00000463596 POLA1P09884 1462 aaPredicted RBP24.49■■□□□ 1.51
APTX-211ENST00000463596 BIVM-ERCC5R4GMW8 1640 aa24.45■■□□□ 1.51
APTX-211ENST00000463596 WRNQ14191 1432 aaPredicted RBP eCLIP24.45■■□□□ 1.5
APTX-211ENST00000463596 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
APTX-211ENST00000463596 TARBP1Q13395 1621 aaKnown RBP24.44■■□□□ 1.5
APTX-211ENST00000463596 FGD5Q6ZNL6 1462 aa24.43■■□□□ 1.5
APTX-211ENST00000463596 WDR97A6NE52 1622 aa24.4■■□□□ 1.5
APTX-211ENST00000463596 SOGA1O94964 1423 aa24.38■■□□□ 1.49
APTX-211ENST00000463596 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
APTX-211ENST00000463596 RAD54L2Q9Y4B4 1467 aa24.3■■□□□ 1.48
APTX-211ENST00000463596 ZNF608Q9ULD9 1512 aaPredicted RBP24.3■■□□□ 1.48
APTX-211ENST00000463596 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
APTX-211ENST00000463596 ABCA10Q8WWZ4 1543 aa24.27■■□□□ 1.48
APTX-211ENST00000463596 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.46
APTX-211ENST00000463596 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
APTX-211ENST00000463596 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
APTX-211ENST00000463596 GRIN2BQ13224 1484 aa24.12■■□□□ 1.45
APTX-211ENST00000463596 GAPVD1Q14C86 1478 aa24.12■■□□□ 1.45
APTX-211ENST00000463596 PBRM1Q86U86 1689 aa24.1■■□□□ 1.45
APTX-211ENST00000463596 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.45
APTX-211ENST00000463596 DNAJC5Q9H3Z4 198 aa24.04■■□□□ 1.44
APTX-211ENST00000463596 ERICH3Q5RHP9 1530 aa24.01■■□□□ 1.43
APTX-211ENST00000463596 SNAPC4Q5SXM2 1469 aa24.01■■□□□ 1.43
APTX-211ENST00000463596 OSCARQ8IYS5 282 aa23.98■■□□□ 1.43
APTX-211ENST00000463596 CHD1O14646 1710 aa23.97■■□□□ 1.43
APTX-211ENST00000463596 KIF27Q86VH2 1401 aa23.96■■□□□ 1.43
APTX-211ENST00000463596 SYNJ2O15056 1496 aa23.96■■□□□ 1.43
APTX-211ENST00000463596 TRIM41Q8WV44 630 aa23.91■■□□□ 1.42
APTX-211ENST00000463596 ADAMTS12P58397 1594 aa23.89■■□□□ 1.42
APTX-211ENST00000463596 FHAD1B1AJZ9 1412 aa23.87■■□□□ 1.41
APTX-211ENST00000463596 CHMP7Q8WUX9 453 aaPredicted RBP23.86■■□□□ 1.41
APTX-211ENST00000463596 CUL7Q14999 1698 aa23.84■■□□□ 1.41
APTX-211ENST00000463596 FBLN2P98095 1184 aa23.83■■□□□ 1.4
APTX-211ENST00000463596 IGF1RP08069 1367 aa23.81■■□□□ 1.4
APTX-211ENST00000463596 GRIN2AQ12879 1464 aa23.8■■□□□ 1.4
APTX-211ENST00000463596 CLASP1Q7Z460 1538 aa23.73■■□□□ 1.39
APTX-211ENST00000463596 NUP160Q12769 1436 aa23.7■■□□□ 1.38
APTX-211ENST00000463596 EEA1Q15075 1411 aa23.68■■□□□ 1.38
APTX-211ENST00000463596 CARMIL1Q5VZK9 1371 aa23.67■■□□□ 1.38
APTX-211ENST00000463596 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.38
APTX-211ENST00000463596 CEP170Q5SW79 1584 aa23.64■■□□□ 1.38
APTX-211ENST00000463596 RAPGEF2Q9Y4G8 1499 aa23.57■■□□□ 1.36
APTX-211ENST00000463596 ARHGEF11O15085 1522 aa23.57■■□□□ 1.36
APTX-211ENST00000463596 RIMBP3CA6NJZ7 1639 aa23.56■■□□□ 1.36
APTX-211ENST00000463596 RIMBP3BA6NNM3 1639 aa23.56■■□□□ 1.36
APTX-211ENST00000463596 RIMBP3Q9UFD9 1639 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 231.3 ms