RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-208ENST00000463419 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
NIN-208ENST00000463419 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
NIN-208ENST00000463419 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
NIN-208ENST00000463419 ERICH3Q5RHP9 1530 aa22.67■■□□□ 1.22
NIN-208ENST00000463419 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
NIN-208ENST00000463419 NUP160Q12769 1436 aa22.6■■□□□ 1.21
NIN-208ENST00000463419 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
NIN-208ENST00000463419 KIF27Q86VH2 1401 aa22.5■■□□□ 1.19
NIN-208ENST00000463419 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
NIN-208ENST00000463419 PPP4R3CPQ6ZMV5 832 aa22.47■■□□□ 1.19
NIN-208ENST00000463419 IGF1RP08069 1367 aa22.47■■□□□ 1.19
NIN-208ENST00000463419 SHROOM2Q13796 1616 aa22.46■■□□□ 1.19
NIN-208ENST00000463419 TRHP20396 242 aaPredicted RBP22.43■■□□□ 1.18
NIN-208ENST00000463419 JPH4Q96JJ6 628 aa22.38■■□□□ 1.17
NIN-208ENST00000463419 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
NIN-208ENST00000463419 CUL7Q14999 1698 aa22.38■■□□□ 1.17
NIN-208ENST00000463419 PRG4Q92954 1404 aaPredicted RBP22.37■■□□□ 1.17
NIN-208ENST00000463419 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
NIN-208ENST00000463419 KIAA0586Q9BVV6 1533 aa22.3■■□□□ 1.16
NIN-208ENST00000463419 DCAF8L1A6NGE4 600 aa22.26■■□□□ 1.15
NIN-208ENST00000463419 HOXD11P31277 338 aaPredicted RBP22.18■■□□□ 1.14
NIN-208ENST00000463419 CACNB1Q02641 598 aaPredicted RBP22.16■■□□□ 1.14
NIN-208ENST00000463419 RAPGEF2Q9Y4G8 1499 aa22.14■■□□□ 1.14
NIN-208ENST00000463419 IQGAP2Q13576 1575 aa22.11■■□□□ 1.13
NIN-208ENST00000463419 CNKSR2Q8WXI2 1034 aa22.1■■□□□ 1.13
NIN-208ENST00000463419 ADCY10Q96PN6 1610 aa22.07■■□□□ 1.12
NIN-208ENST00000463419 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
NIN-208ENST00000463419 PTPRGP23470 1445 aa22.05■■□□□ 1.12
NIN-208ENST00000463419 NPM1P06748 294 aaKnown RBP eCLIP22.05■■□□□ 1.12
NIN-208ENST00000463419 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
NIN-208ENST00000463419 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
NIN-208ENST00000463419 DISP1Q96F81 1524 aa22.01■■□□□ 1.11
NIN-208ENST00000463419 MAPKBP1O60336 1514 aa21.99■■□□□ 1.11
NIN-208ENST00000463419 UGGT2Q9NYU1 1516 aa21.99■■□□□ 1.11
NIN-208ENST00000463419 PRXQ9BXM0 1461 aa21.98■■□□□ 1.11
NIN-208ENST00000463419 RNF216Q9NWF9 866 aaPredicted RBP21.96■■□□□ 1.11
NIN-208ENST00000463419 KIF13AQ9H1H9 1805 aa21.96■■□□□ 1.11
NIN-208ENST00000463419 ABCC10Q5T3U5 1492 aa21.95■■□□□ 1.1
NIN-208ENST00000463419 FAM69CQ0P6D2 419 aa21.93■■□□□ 1.1
NIN-208ENST00000463419 KIAA0556O60303 1618 aa21.91■■□□□ 1.1
NIN-208ENST00000463419 CTTNBP2Q8WZ74 1663 aa21.9■■□□□ 1.1
NIN-208ENST00000463419 ABCC2Q92887 1545 aa21.9■■□□□ 1.1
NIN-208ENST00000463419 DIP2BQ9P265 1576 aa21.89■■□□□ 1.09
NIN-208ENST00000463419 UACAQ9BZF9 1416 aa21.89■■□□□ 1.09
NIN-208ENST00000463419 UHRF1BP1LA0JNW5 1464 aa21.88■■□□□ 1.09
NIN-208ENST00000463419 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
NIN-208ENST00000463419 RNF39Q9H2S5 420 aa21.83■■□□□ 1.09
NIN-208ENST00000463419 GOLGA3Q08378 1498 aa21.82■■□□□ 1.08
NIN-208ENST00000463419 EEA1Q15075 1411 aa21.81■■□□□ 1.08
NIN-208ENST00000463419 ASXL2Q76L83 1435 aa21.8■■□□□ 1.08
NIN-208ENST00000463419 KDM5BQ9UGL1 1544 aa21.79■■□□□ 1.08
NIN-208ENST00000463419 PLB1Q6P1J6 1458 aa21.78■■□□□ 1.08
NIN-208ENST00000463419 FAM9AQ8IZU1 332 aaPredicted RBP21.75■■□□□ 1.07
NIN-208ENST00000463419 ZCCHC11Q5TAX3 1644 aaKnown RBP21.73■■□□□ 1.07
NIN-208ENST00000463419 ABCA8O94911 1581 aa21.7■■□□□ 1.06
NIN-208ENST00000463419 GLI2P10070 1586 aa21.69■■□□□ 1.06
NIN-208ENST00000463419 P3H3Q8IVL6 736 aa21.69■■□□□ 1.06
NIN-208ENST00000463419 EPRSP07814 1512 aaKnown RBP21.67■■□□□ 1.06
NIN-208ENST00000463419 TSPOAP1O95153 1857 aa21.67■■□□□ 1.06
NIN-208ENST00000463419 SAMD9Q5K651 1589 aa21.65■■□□□ 1.06
NIN-208ENST00000463419 KDM6BO15054 1643 aa21.63■■□□□ 1.05
NIN-208ENST00000463419 WDR7Q9Y4E6 1490 aa21.62■■□□□ 1.05
NIN-208ENST00000463419 KIF21BO75037 1637 aa21.61■■□□□ 1.05
NIN-208ENST00000463419 PPRC1Q5VV67 1664 aaKnown RBP21.61■■□□□ 1.05
NIN-208ENST00000463419 RANGAP1P46060 587 aaPredicted RBP21.59■■□□□ 1.05
NIN-208ENST00000463419 MAP3K4Q9Y6R4 1608 aa21.59■■□□□ 1.05
NIN-208ENST00000463419 ARID3CA6NKF2 412 aa21.55■■□□□ 1.04
NIN-208ENST00000463419 KCNH8Q96L42 1107 aa21.54■■□□□ 1.04
NIN-208ENST00000463419 ATP10BO94823 1461 aa21.54■■□□□ 1.04
NIN-208ENST00000463419 NCBP3Q53F19 620 aaKnown RBP21.53■■□□□ 1.04
NIN-208ENST00000463419 FHOD3Q2V2M9 1422 aa21.52■■□□□ 1.04
NIN-208ENST00000463419 EHMT2Q96KQ7 1210 aa21.52■■□□□ 1.03
NIN-208ENST00000463419 TEX14Q8IWB6 1497 aa21.51■■□□□ 1.03
NIN-208ENST00000463419 RAPGEF6Q8TEU7 1601 aa21.5■■□□□ 1.03
NIN-208ENST00000463419 C1QBPQ07021 282 aaKnown RBP21.5■■□□□ 1.03
NIN-208ENST00000463419 COL17A1Q9UMD9 1497 aaPredicted RBP21.49■■□□□ 1.03
NIN-208ENST00000463419 CD109Q6YHK3 1445 aa21.47■■□□□ 1.03
NIN-208ENST00000463419 EFCAB5A4FU69 1503 aa21.46■■□□□ 1.03
NIN-208ENST00000463419 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
NIN-208ENST00000463419 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.02
NIN-208ENST00000463419 CFAP43Q8NDM7 1665 aa21.45■■□□□ 1.02
NIN-208ENST00000463419 MAGI3Q5TCQ9 1506 aa21.43■■□□□ 1.02
NIN-208ENST00000463419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.41■■□□□ 1.02
NIN-208ENST00000463419 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
NIN-208ENST00000463419 ABCA9Q8IUA7 1624 aa21.34■■□□□ 1.01
NIN-208ENST00000463419 KDM4FA0A1W2PPD8 638 aa21.34■■□□□ 1.01
NIN-208ENST00000463419 ARHGAP35Q9NRY4 1499 aa21.34■■□□□ 1.01
NIN-208ENST00000463419 PLEKHD1A6NEE1 506 aa21.29■■□□□ 1
NIN-208ENST00000463419 FMN1Q68DA7 1419 aa21.28■■□□□ 1
NIN-208ENST00000463419 CDK13Q14004 1512 aaKnown RBP21.26■□□□□ 0.99
NIN-208ENST00000463419 ARAP3Q8WWN8 1544 aa21.26■□□□□ 0.99
NIN-208ENST00000463419 ATP1B4Q9UN42 357 aaPredicted RBP21.23■□□□□ 0.99
NIN-208ENST00000463419 PHLDB1Q86UU1 1377 aa21.23■□□□□ 0.99
NIN-208ENST00000463419 ADGRL1O94910 1474 aa21.22■□□□□ 0.99
NIN-208ENST00000463419 NEO1Q92859 1461 aa21.22■□□□□ 0.99
NIN-208ENST00000463419 NPM3O75607 178 aaKnown RBP21.22■□□□□ 0.99
NIN-208ENST00000463419 HECW1Q76N89 1606 aa21.21■□□□□ 0.99
NIN-208ENST00000463419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.21■□□□□ 0.99
NIN-208ENST00000463419 RAPGEF3O95398 923 aa21.17■□□□□ 0.98
NIN-208ENST00000463419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms