RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-208ENST00000463419 AEBP2Q6ZN18 517 aaPredicted RBP34.23■■■■□ 3.07
NIN-208ENST00000463419 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.75
NIN-208ENST00000463419 NISCHQ9Y2I1 1504 aa32.12■■■□□ 2.73
NIN-208ENST00000463419 SENP3Q9H4L4 574 aaPredicted RBP29.23■■■□□ 2.27
NIN-208ENST00000463419 PHF23Q9BUL5 403 aaPredicted RBP28.82■■■□□ 2.2
NIN-208ENST00000463419 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
NIN-208ENST00000463419 ABCC9O60706 1549 aa28.44■■■□□ 2.14
NIN-208ENST00000463419 FOXD1Q16676 465 aa27.28■■□□□ 1.96
NIN-208ENST00000463419 RB1CC1Q8TDY2 1594 aa27.16■■□□□ 1.94
NIN-208ENST00000463419 NACADO15069 1562 aa27.05■■□□□ 1.92
NIN-208ENST00000463419 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
NIN-208ENST00000463419 MYO15BQ96JP2 1530 aa26.77■■□□□ 1.88
NIN-208ENST00000463419 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
NIN-208ENST00000463419 PABPN1Q86U42 306 aaKnown RBP eCLIP26.54■■□□□ 1.84
NIN-208ENST00000463419 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
NIN-208ENST00000463419 UNC13AQ9UPW8 1703 aa26.52■■□□□ 1.84
NIN-208ENST00000463419 DNAJC5BQ9UF47 199 aa26.46■■□□□ 1.83
NIN-208ENST00000463419 BICRAQ9NZM4 1560 aa26.38■■□□□ 1.81
NIN-208ENST00000463419 SCRIBQ14160 1630 aa26.16■■□□□ 1.78
NIN-208ENST00000463419 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
NIN-208ENST00000463419 EIF4G1Q04637 1599 aaKnown RBP25.71■■□□□ 1.71
NIN-208ENST00000463419 CC2D2AQ9P2K1 1620 aa25.69■■□□□ 1.7
NIN-208ENST00000463419 PLPPR3Q6T4P5 718 aa25.67■■□□□ 1.7
NIN-208ENST00000463419 MSH5O43196 834 aa25.63■■□□□ 1.69
NIN-208ENST00000463419 CECR2Q9BXF3 1484 aa25.59■■□□□ 1.69
NIN-208ENST00000463419 PIAS4Q8N2W9 510 aaPredicted RBP25.46■■□□□ 1.67
NIN-208ENST00000463419 POTEDQ86YR6 584 aa25.44■■□□□ 1.66
NIN-208ENST00000463419 PPP6R1Q9UPN7 881 aa25.32■■□□□ 1.64
NIN-208ENST00000463419 ADRA2BP18089 450 aa25.24■■□□□ 1.63
NIN-208ENST00000463419 NCAPD3P42695 1498 aa24.99■■□□□ 1.59
NIN-208ENST00000463419 SMARCA4P51532 1647 aa24.98■■□□□ 1.59
NIN-208ENST00000463419 ATAD2BQ9ULI0 1458 aa24.95■■□□□ 1.59
NIN-208ENST00000463419 BAZ1AQ9NRL2 1556 aaPredicted RBP24.9■■□□□ 1.58
NIN-208ENST00000463419 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
NIN-208ENST00000463419 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
NIN-208ENST00000463419 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
NIN-208ENST00000463419 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
NIN-208ENST00000463419 BAZ1BQ9UIG0 1483 aaKnown RBP24.71■■□□□ 1.55
NIN-208ENST00000463419 NESP48681 1621 aa24.52■■□□□ 1.52
NIN-208ENST00000463419 ERCC6Q03468 1493 aa24.52■■□□□ 1.52
NIN-208ENST00000463419 WIZO95785 1651 aa24.46■■□□□ 1.51
NIN-208ENST00000463419 CUX2O14529 1486 aa24.38■■□□□ 1.49
NIN-208ENST00000463419 LAMC3Q9Y6N6 1575 aa24.36■■□□□ 1.49
NIN-208ENST00000463419 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
NIN-208ENST00000463419 CADPSQ9ULU8 1353 aa24.24■■□□□ 1.47
NIN-208ENST00000463419 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
NIN-208ENST00000463419 THOC2Q8NI27 1593 aaKnown RBP24.2■■□□□ 1.46
NIN-208ENST00000463419 TOP2AP11388 1531 aaKnown RBP24.17■■□□□ 1.46
NIN-208ENST00000463419 KIF21AQ7Z4S6 1674 aa24.16■■□□□ 1.46
NIN-208ENST00000463419 DNAJC5Q9H3Z4 198 aa24.08■■□□□ 1.44
NIN-208ENST00000463419 CFTRP13569 1480 aa24.02■■□□□ 1.44
NIN-208ENST00000463419 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
NIN-208ENST00000463419 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
NIN-208ENST00000463419 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
NIN-208ENST00000463419 WDR62O43379 1518 aa23.93■■□□□ 1.42
NIN-208ENST00000463419 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
NIN-208ENST00000463419 URB2Q14146 1524 aaKnown RBP23.76■■□□□ 1.39
NIN-208ENST00000463419 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
NIN-208ENST00000463419 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
NIN-208ENST00000463419 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
NIN-208ENST00000463419 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
NIN-208ENST00000463419 IFT140Q96RY7 1462 aa23.47■■□□□ 1.35
NIN-208ENST00000463419 DNMBPQ6XZF7 1577 aa23.46■■□□□ 1.35
NIN-208ENST00000463419 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
NIN-208ENST00000463419 OSCARQ8IYS5 282 aa23.33■■□□□ 1.32
NIN-208ENST00000463419 POLA1P09884 1462 aaPredicted RBP23.32■■□□□ 1.32
NIN-208ENST00000463419 TARBP1Q13395 1621 aaKnown RBP23.31■■□□□ 1.32
NIN-208ENST00000463419 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
NIN-208ENST00000463419 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.31
NIN-208ENST00000463419 MAPK8IP2Q13387 824 aaPredicted RBP23.25■■□□□ 1.31
NIN-208ENST00000463419 CUX1P39880 1505 aa23.24■■□□□ 1.31
NIN-208ENST00000463419 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
NIN-208ENST00000463419 SOGA1O94964 1423 aa23.22■■□□□ 1.31
NIN-208ENST00000463419 FGD5Q6ZNL6 1462 aa23.22■■□□□ 1.31
NIN-208ENST00000463419 TDRD9Q8NDG6 1382 aaKnown RBP23.15■■□□□ 1.3
NIN-208ENST00000463419 TRIM41Q8WV44 630 aa23.14■■□□□ 1.3
NIN-208ENST00000463419 DMRT2Q9Y5R5 561 aa23.14■■□□□ 1.3
NIN-208ENST00000463419 SCAF1Q9H7N4 1312 aaKnown RBP23.08■■□□□ 1.29
NIN-208ENST00000463419 WDR97A6NE52 1622 aa23.06■■□□□ 1.28
NIN-208ENST00000463419 FBLN2P98095 1184 aa23.04■■□□□ 1.28
NIN-208ENST00000463419 CHD1O14646 1710 aa23.03■■□□□ 1.28
NIN-208ENST00000463419 SNAPC4Q5SXM2 1469 aa23.02■■□□□ 1.27
NIN-208ENST00000463419 RIMBP3CA6NJZ7 1639 aa22.98■■□□□ 1.27
NIN-208ENST00000463419 RIMBP3BA6NNM3 1639 aa22.98■■□□□ 1.27
NIN-208ENST00000463419 RIMBP3Q9UFD9 1639 aa22.98■■□□□ 1.27
NIN-208ENST00000463419 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
NIN-208ENST00000463419 ABCA10Q8WWZ4 1543 aa22.96■■□□□ 1.27
NIN-208ENST00000463419 WRNQ14191 1432 aaPredicted RBP eCLIP22.95■■□□□ 1.27
NIN-208ENST00000463419 ARHGEF11O15085 1522 aa22.95■■□□□ 1.26
NIN-208ENST00000463419 MAGI1Q96QZ7 1491 aaPredicted RBP22.95■■□□□ 1.26
NIN-208ENST00000463419 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
NIN-208ENST00000463419 TOP2BQ02880 1626 aa22.92■■□□□ 1.26
NIN-208ENST00000463419 BIVM-ERCC5R4GMW8 1640 aa22.92■■□□□ 1.26
NIN-208ENST00000463419 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
NIN-208ENST00000463419 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
NIN-208ENST00000463419 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
NIN-208ENST00000463419 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
NIN-208ENST00000463419 SYNJ2O15056 1496 aa22.87■■□□□ 1.25
NIN-208ENST00000463419 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
NIN-208ENST00000463419 CYB5RLQ6IPT4 315 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms