RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 PRG4Q92954 1404 aaPredicted RBP38.33■■■■□ 3.73
PDLIM7-206ENST00000463411 JPH4Q96JJ6 628 aa38.28■■■■□ 3.72
PDLIM7-206ENST00000463411 KIAA0586Q9BVV6 1533 aa38.2■■■■□ 3.71
PDLIM7-206ENST00000463411 CARMIL1Q5VZK9 1371 aa38.16■■■■□ 3.7
PDLIM7-206ENST00000463411 IQGAP2Q13576 1575 aa37.94■■■■□ 3.66
PDLIM7-206ENST00000463411 RAPGEF2Q9Y4G8 1499 aa37.9■■■■□ 3.66
PDLIM7-206ENST00000463411 ADCY10Q96PN6 1610 aa37.88■■■■□ 3.65
PDLIM7-206ENST00000463411 CARMIL2Q6F5E8 1435 aa37.87■■■■□ 3.65
PDLIM7-206ENST00000463411 NPM1P06748 294 aaKnown RBP eCLIP37.86■■■■□ 3.65
PDLIM7-206ENST00000463411 KIF13AQ9H1H9 1805 aa37.83■■■■□ 3.65
PDLIM7-206ENST00000463411 MAPKBP1O60336 1514 aa37.79■■■■□ 3.64
PDLIM7-206ENST00000463411 PTPRGP23470 1445 aa37.78■■■■□ 3.64
PDLIM7-206ENST00000463411 TNIKQ9UKE5 1360 aa37.76■■■■□ 3.64
PDLIM7-206ENST00000463411 TTBK1Q5TCY1 1321 aaPredicted RBP37.68■■■■□ 3.62
PDLIM7-206ENST00000463411 ABCC10Q5T3U5 1492 aa37.68■■■■□ 3.62
PDLIM7-206ENST00000463411 CTTNBP2Q8WZ74 1663 aa37.68■■■■□ 3.62
PDLIM7-206ENST00000463411 UGGT2Q9NYU1 1516 aa37.67■■■■□ 3.62
PDLIM7-206ENST00000463411 DISP1Q96F81 1524 aa37.66■■■■□ 3.62
PDLIM7-206ENST00000463411 DIP2BQ9P265 1576 aa37.63■■■■□ 3.62
PDLIM7-206ENST00000463411 FAM69CQ0P6D2 419 aa37.6■■■■□ 3.61
PDLIM7-206ENST00000463411 KIAA0556O60303 1618 aa37.59■■■■□ 3.61
PDLIM7-206ENST00000463411 ABCC2Q92887 1545 aa37.56■■■■□ 3.6
PDLIM7-206ENST00000463411 PRXQ9BXM0 1461 aa37.55■■■■□ 3.6
PDLIM7-206ENST00000463411 UHRF1BP1LA0JNW5 1464 aa37.52■■■■□ 3.6
PDLIM7-206ENST00000463411 UACAQ9BZF9 1416 aa37.52■■■■□ 3.6
PDLIM7-206ENST00000463411 GOLGA3Q08378 1498 aa37.45■■■■□ 3.59
PDLIM7-206ENST00000463411 PLB1Q6P1J6 1458 aa37.39■■■■□ 3.58
PDLIM7-206ENST00000463411 ASXL2Q76L83 1435 aa37.37■■■■□ 3.57
PDLIM7-206ENST00000463411 TSPOAP1O95153 1857 aa37.37■■■■□ 3.57
PDLIM7-206ENST00000463411 KDM5BQ9UGL1 1544 aa37.34■■■■□ 3.57
PDLIM7-206ENST00000463411 ZCCHC11Q5TAX3 1644 aaKnown RBP37.32■■■■□ 3.57
PDLIM7-206ENST00000463411 EEA1Q15075 1411 aa37.32■■■■□ 3.56
PDLIM7-206ENST00000463411 CSRNP3Q8WYN3 585 aa37.31■■■■□ 3.56
PDLIM7-206ENST00000463411 GLI2P10070 1586 aa37.28■■■■□ 3.56
PDLIM7-206ENST00000463411 KDM6BO15054 1643 aa37.26■■■■□ 3.56
PDLIM7-206ENST00000463411 ABCA8O94911 1581 aa37.19■■■■□ 3.54
PDLIM7-206ENST00000463411 AEBP2Q6ZN18 517 aaPredicted RBP37.18■■■■□ 3.54
PDLIM7-206ENST00000463411 EPRSP07814 1512 aaKnown RBP37.16■■■■□ 3.54
PDLIM7-206ENST00000463411 FAM9AQ8IZU1 332 aaPredicted RBP37.13■■■■□ 3.53
PDLIM7-206ENST00000463411 PPRC1Q5VV67 1664 aaKnown RBP37.12■■■■□ 3.53
PDLIM7-206ENST00000463411 WDR7Q9Y4E6 1490 aa37.11■■■■□ 3.53
PDLIM7-206ENST00000463411 MAP3K4Q9Y6R4 1608 aa37.1■■■■□ 3.53
PDLIM7-206ENST00000463411 SAMD9Q5K651 1589 aa37.08■■■■□ 3.53
PDLIM7-206ENST00000463411 P3H3Q8IVL6 736 aa37.02■■■■□ 3.52
PDLIM7-206ENST00000463411 KIF21BO75037 1637 aa37.01■■■■□ 3.52
PDLIM7-206ENST00000463411 TEX14Q8IWB6 1497 aa37.01■■■■□ 3.51
PDLIM7-206ENST00000463411 CFAP43Q8NDM7 1665 aa36.92■■■■□ 3.5
PDLIM7-206ENST00000463411 RAPGEF6Q8TEU7 1601 aa36.9■■■■□ 3.5
PDLIM7-206ENST00000463411 CHIC1Q5VXU3 224 aa36.86■■■■□ 3.49
PDLIM7-206ENST00000463411 RANGAP1P46060 587 aaPredicted RBP36.85■■■■□ 3.49
PDLIM7-206ENST00000463411 KCNH8Q96L42 1107 aa36.84■■■■□ 3.49
PDLIM7-206ENST00000463411 ATP10BO94823 1461 aa36.82■■■■□ 3.49
PDLIM7-206ENST00000463411 EFCAB5A4FU69 1503 aa36.82■■■■□ 3.48
PDLIM7-206ENST00000463411 ARID3CA6NKF2 412 aa36.82■■■■□ 3.48
PDLIM7-206ENST00000463411 CD109Q6YHK3 1445 aa36.81■■■■□ 3.48
PDLIM7-206ENST00000463411 FHOD3Q2V2M9 1422 aa36.79■■■■□ 3.48
PDLIM7-206ENST00000463411 MAGI3Q5TCQ9 1506 aa36.79■■■■□ 3.48
PDLIM7-206ENST00000463411 COL17A1Q9UMD9 1497 aaPredicted RBP36.74■■■■□ 3.47
PDLIM7-206ENST00000463411 NUP153P49790 1475 aaKnown RBP36.69■■■■□ 3.46
PDLIM7-206ENST00000463411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.68■■■■□ 3.46
PDLIM7-206ENST00000463411 HNRNPUL2Q1KMD3 747 aaKnown RBP36.68■■■■□ 3.46
PDLIM7-206ENST00000463411 ABCA9Q8IUA7 1624 aa36.67■■■■□ 3.46
PDLIM7-206ENST00000463411 UBTFP17480 764 aaKnown RBP36.65■■■■□ 3.46
PDLIM7-206ENST00000463411 EHMT2Q96KQ7 1210 aa36.62■■■■□ 3.45
PDLIM7-206ENST00000463411 KDM4FA0A1W2PPD8 638 aa36.57■■■■□ 3.44
PDLIM7-206ENST00000463411 ADGRL1O94910 1474 aa36.49■■■■□ 3.43
PDLIM7-206ENST00000463411 ARAP3Q8WWN8 1544 aa36.49■■■■□ 3.43
PDLIM7-206ENST00000463411 PLEKHD1A6NEE1 506 aa36.47■■■■□ 3.43
PDLIM7-206ENST00000463411 PHLDB1Q86UU1 1377 aa36.46■■■■□ 3.43
PDLIM7-206ENST00000463411 FMN1Q68DA7 1419 aa36.45■■■■□ 3.43
PDLIM7-206ENST00000463411 ARHGAP35Q9NRY4 1499 aa36.44■■■■□ 3.42
PDLIM7-206ENST00000463411 HECW1Q76N89 1606 aa36.42■■■■□ 3.42
PDLIM7-206ENST00000463411 NEO1Q92859 1461 aa36.42■■■■□ 3.42
PDLIM7-206ENST00000463411 CDK13Q14004 1512 aaKnown RBP36.39■■■■□ 3.42
PDLIM7-206ENST00000463411 CFAP74Q9C0B2 1584 aa36.33■■■■□ 3.41
PDLIM7-206ENST00000463411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.32■■■■□ 3.42e-7■■□□□ 14.3
PDLIM7-206ENST00000463411 ATP1B4Q9UN42 357 aaPredicted RBP36.3■■■■□ 3.4
PDLIM7-206ENST00000463411 TTC37Q6PGP7 1564 aa36.29■■■■□ 3.4
PDLIM7-206ENST00000463411 FANCAO15360 1455 aa36.23■■■■□ 3.39
PDLIM7-206ENST00000463411 FRMPD1Q5SYB0 1578 aa36.22■■■■□ 3.39
PDLIM7-206ENST00000463411 RAPGEF3O95398 923 aa36.2■■■■□ 3.39
PDLIM7-206ENST00000463411 CDK11AQ9UQ88 783 aaPredicted RBP36.19■■■■□ 3.38
PDLIM7-206ENST00000463411 AKNAQ7Z591 1439 aa36.17■■■■□ 3.38
PDLIM7-206ENST00000463411 DENND4BO75064 1496 aaPredicted RBP36.16■■■■□ 3.38
PDLIM7-206ENST00000463411 RICTORQ6R327 1708 aa36.14■■■■□ 3.38
PDLIM7-206ENST00000463411 LRRIQ1Q96JM4 1722 aa36.14■■■■□ 3.38
PDLIM7-206ENST00000463411 KIF14Q15058 1648 aa36.13■■■■□ 3.37
PDLIM7-206ENST00000463411 MYO5CQ9NQX4 1742 aa36.12■■■■□ 3.37
PDLIM7-206ENST00000463411 PCF11O94913 1555 aaKnown RBP36.11■■■■□ 3.37
PDLIM7-206ENST00000463411 CLIP1P30622 1438 aa36.09■■■■□ 3.37
PDLIM7-206ENST00000463411 PLCH2O75038 1416 aa36.08■■■■□ 3.37
PDLIM7-206ENST00000463411 TROQ12816 1431 aaPredicted RBP36.08■■■■□ 3.37
PDLIM7-206ENST00000463411 ARHGEF40Q8TER5 1519 aa36.07■■■■□ 3.36
PDLIM7-206ENST00000463411 CCDC18Q5T9S5 1454 aa36.06■■■■□ 3.36
PDLIM7-206ENST00000463411 CASKIN1Q8WXD9 1431 aa36.06■■■■□ 3.36
PDLIM7-206ENST00000463411 ZMYM4Q5VZL5 1548 aa36.02■■■■□ 3.36
PDLIM7-206ENST00000463411 FYCO1Q9BQS8 1478 aa35.99■■■■□ 3.35
PDLIM7-206ENST00000463411 ADAMTSL3P82987 1691 aa35.95■■■■□ 3.35
PDLIM7-206ENST00000463411 BCORL1Q5H9F3 1711 aa35.94■■■■□ 3.34
PDLIM7-206ENST00000463411 ZFYVE16Q7Z3T8 1539 aa35.94■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms