RNA–Protein interactions for RNA: ENST00000463194.1

RFC2-203, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-203ENST00000463194 KIAA0586Q9BVV6 1533 aa32.89■■■□□ 2.86
RFC2-203ENST00000463194 ERCC6L2Q5T890 1561 aa32.86■■■□□ 2.85
RFC2-203ENST00000463194 PRG4Q92954 1404 aaPredicted RBP32.83■■■□□ 2.85
RFC2-203ENST00000463194 RAPGEF2Q9Y4G8 1499 aa32.8■■■□□ 2.84
RFC2-203ENST00000463194 PRXQ9BXM0 1461 aa32.67■■■□□ 2.82
RFC2-203ENST00000463194 CHIC1Q5VXU3 224 aa32.65■■■□□ 2.82
RFC2-203ENST00000463194 CSRNP3Q8WYN3 585 aa32.63■■■□□ 2.81
RFC2-203ENST00000463194 EEA1Q15075 1411 aa32.62■■■□□ 2.81
RFC2-203ENST00000463194 IQGAP2Q13576 1575 aa32.62■■■□□ 2.81
RFC2-203ENST00000463194 CARMIL2Q6F5E8 1435 aa32.53■■■□□ 2.8
RFC2-203ENST00000463194 UGGT2Q9NYU1 1516 aa32.48■■■□□ 2.79
RFC2-203ENST00000463194 TRHP20396 242 aaPredicted RBP32.46■■■□□ 2.79
RFC2-203ENST00000463194 TNIKQ9UKE5 1360 aa32.45■■■□□ 2.79
RFC2-203ENST00000463194 PTPRGP23470 1445 aa32.44■■■□□ 2.78
RFC2-203ENST00000463194 DISP1Q96F81 1524 aa32.44■■■□□ 2.78
RFC2-203ENST00000463194 CTTNBP2Q8WZ74 1663 aa32.4■■■□□ 2.78
RFC2-203ENST00000463194 FAM9AQ8IZU1 332 aaPredicted RBP32.38■■■□□ 2.77
RFC2-203ENST00000463194 NPM1P06748 294 aaKnown RBP eCLIP32.32■■■□□ 2.76
RFC2-203ENST00000463194 ADCY10Q96PN6 1610 aa32.3■■■□□ 2.76
RFC2-203ENST00000463194 KIAA0556O60303 1618 aa32.29■■■□□ 2.76
RFC2-203ENST00000463194 GOLGA3Q08378 1498 aa32.29■■■□□ 2.76
RFC2-203ENST00000463194 TTBK1Q5TCY1 1321 aaPredicted RBP32.26■■■□□ 2.76
RFC2-203ENST00000463194 KIF21BO75037 1637 aa32.22■■■□□ 2.75
RFC2-203ENST00000463194 UHRF1BP1LA0JNW5 1464 aa32.22■■■□□ 2.75
RFC2-203ENST00000463194 UACAQ9BZF9 1416 aa32.21■■■□□ 2.75
RFC2-203ENST00000463194 MAPKBP1O60336 1514 aa32.18■■■□□ 2.74
RFC2-203ENST00000463194 ABCC2Q92887 1545 aa32.16■■■□□ 2.74
RFC2-203ENST00000463194 ABCC10Q5T3U5 1492 aa32.08■■■□□ 2.73
RFC2-203ENST00000463194 KDM5BQ9UGL1 1544 aa32.05■■■□□ 2.72
RFC2-203ENST00000463194 SAMD9Q5K651 1589 aa32.04■■■□□ 2.72
RFC2-203ENST00000463194 P3H3Q8IVL6 736 aa32.02■■■□□ 2.72
RFC2-203ENST00000463194 PLB1Q6P1J6 1458 aa32.02■■■□□ 2.72
RFC2-203ENST00000463194 FAM69CQ0P6D2 419 aa32.01■■■□□ 2.71
RFC2-203ENST00000463194 KIF13AQ9H1H9 1805 aa32■■■□□ 2.71
RFC2-203ENST00000463194 ABCA8O94911 1581 aa31.99■■■□□ 2.71
RFC2-203ENST00000463194 UBTFP17480 764 aaKnown RBP31.99■■■□□ 2.71
RFC2-203ENST00000463194 ASXL2Q76L83 1435 aa31.96■■■□□ 2.71
RFC2-203ENST00000463194 DIP2BQ9P265 1576 aa31.95■■■□□ 2.71
RFC2-203ENST00000463194 RANGAP1P46060 587 aaPredicted RBP31.92■■■□□ 2.7
RFC2-203ENST00000463194 EHMT2Q96KQ7 1210 aa31.9■■■□□ 2.7
RFC2-203ENST00000463194 ZCCHC11Q5TAX3 1644 aaKnown RBP31.89■■■□□ 2.7
RFC2-203ENST00000463194 EFCAB5A4FU69 1503 aa31.89■■■□□ 2.7
RFC2-203ENST00000463194 FHOD3Q2V2M9 1422 aa31.83■■■□□ 2.69
RFC2-203ENST00000463194 GLI2P10070 1586 aa31.81■■■□□ 2.68
RFC2-203ENST00000463194 EPRSP07814 1512 aaKnown RBP31.77■■■□□ 2.68
RFC2-203ENST00000463194 WDR7Q9Y4E6 1490 aa31.77■■■□□ 2.68
RFC2-203ENST00000463194 ATP10BO94823 1461 aa31.76■■■□□ 2.67
RFC2-203ENST00000463194 RAPGEF6Q8TEU7 1601 aa31.75■■■□□ 2.67
RFC2-203ENST00000463194 ARHGAP35Q9NRY4 1499 aa31.71■■■□□ 2.67
RFC2-203ENST00000463194 NUP153P49790 1475 aaKnown RBP31.67■■■□□ 2.66
RFC2-203ENST00000463194 ARID3CA6NKF2 412 aa31.66■■■□□ 2.66
RFC2-203ENST00000463194 TSPOAP1O95153 1857 aa31.62■■■□□ 2.65
RFC2-203ENST00000463194 FMN1Q68DA7 1419 aa31.62■■■□□ 2.65
RFC2-203ENST00000463194 KCNH8Q96L42 1107 aa31.62■■■□□ 2.65
RFC2-203ENST00000463194 MAP3K4Q9Y6R4 1608 aa31.6■■■□□ 2.65
RFC2-203ENST00000463194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.57■■■□□ 2.64
RFC2-203ENST00000463194 HNRNPUL2Q1KMD3 747 aaKnown RBP31.57■■■□□ 2.64
RFC2-203ENST00000463194 PPRC1Q5VV67 1664 aaKnown RBP31.55■■■□□ 2.64
RFC2-203ENST00000463194 TEX14Q8IWB6 1497 aa31.52■■■□□ 2.64
RFC2-203ENST00000463194 CD109Q6YHK3 1445 aa31.51■■■□□ 2.64
RFC2-203ENST00000463194 PLEKHD1A6NEE1 506 aa31.5■■■□□ 2.63
RFC2-203ENST00000463194 CFAP43Q8NDM7 1665 aa31.49■■■□□ 2.63
RFC2-203ENST00000463194 MAGI3Q5TCQ9 1506 aa31.48■■■□□ 2.63
RFC2-203ENST00000463194 KDM6BO15054 1643 aa31.47■■■□□ 2.63
RFC2-203ENST00000463194 CLIP1P30622 1438 aa31.47■■■□□ 2.63
RFC2-203ENST00000463194 HECW1Q76N89 1606 aa31.42■■■□□ 2.62
RFC2-203ENST00000463194 ATP1B4Q9UN42 357 aaPredicted RBP31.41■■■□□ 2.62
RFC2-203ENST00000463194 ABCA9Q8IUA7 1624 aa31.4■■■□□ 2.62
RFC2-203ENST00000463194 CDK13Q14004 1512 aaKnown RBP31.39■■■□□ 2.61
RFC2-203ENST00000463194 CASKIN1Q8WXD9 1431 aa31.36■■■□□ 2.61
RFC2-203ENST00000463194 COL17A1Q9UMD9 1497 aaPredicted RBP31.35■■■□□ 2.61
RFC2-203ENST00000463194 CDK11AQ9UQ88 783 aaPredicted RBP31.34■■■□□ 2.61
RFC2-203ENST00000463194 PHLDB1Q86UU1 1377 aa31.3■■■□□ 2.6
RFC2-203ENST00000463194 LOC105371045A0A1W2PR82 267 aa31.28■■■□□ 2.6
RFC2-203ENST00000463194 CEP162Q5TB80 1403 aa31.26■■■□□ 2.6
RFC2-203ENST00000463194 PCF11O94913 1555 aaKnown RBP31.26■■■□□ 2.59
RFC2-203ENST00000463194 FYCO1Q9BQS8 1478 aa31.25■■■□□ 2.59
RFC2-203ENST00000463194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.24■■■□□ 2.59
RFC2-203ENST00000463194 CCDC18Q5T9S5 1454 aa31.23■■■□□ 2.59
RFC2-203ENST00000463194 ARAP3Q8WWN8 1544 aa31.22■■■□□ 2.59
RFC2-203ENST00000463194 NEO1Q92859 1461 aa31.21■■■□□ 2.59
RFC2-203ENST00000463194 TROQ12816 1431 aaPredicted RBP31.21■■■□□ 2.59
RFC2-203ENST00000463194 LRRIQ1Q96JM4 1722 aa31.2■■■□□ 2.58
RFC2-203ENST00000463194 TTC37Q6PGP7 1564 aa31.14■■■□□ 2.58
RFC2-203ENST00000463194 PLCH2O75038 1416 aa31.11■■■□□ 2.57
RFC2-203ENST00000463194 FANCAO15360 1455 aa31.08■■■□□ 2.57
RFC2-203ENST00000463194 KIF14Q15058 1648 aa31.07■■■□□ 2.56
RFC2-203ENST00000463194 AKNAQ7Z591 1439 aa31.07■■■□□ 2.56
RFC2-203ENST00000463194 CFAP74Q9C0B2 1584 aa31.04■■■□□ 2.56
RFC2-203ENST00000463194 RAPGEF3O95398 923 aa31.02■■■□□ 2.56
RFC2-203ENST00000463194 EFCAB2Q5VUJ9 269 aa31.01■■■□□ 2.55
RFC2-203ENST00000463194 DENND4BO75064 1496 aaPredicted RBP30.97■■■□□ 2.55
RFC2-203ENST00000463194 MYO5CQ9NQX4 1742 aa30.97■■■□□ 2.55
RFC2-203ENST00000463194 AEBP2Q6ZN18 517 aaPredicted RBP30.95■■■□□ 2.55
RFC2-203ENST00000463194 VPS8Q8N3P4 1428 aa30.93■■■□□ 2.54
RFC2-203ENST00000463194 KDM4FA0A1W2PPD8 638 aa30.92■■■□□ 2.54
RFC2-203ENST00000463194 FRMPD1Q5SYB0 1578 aa30.92■■■□□ 2.54
RFC2-203ENST00000463194 ADGRL1O94910 1474 aa30.9■■■□□ 2.54
RFC2-203ENST00000463194 MTUS2Q5JR59 1369 aa30.9■■■□□ 2.54
RFC2-203ENST00000463194 SCAPERQ9BY12 1400 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms