RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 DIP2BQ9P265 1576 aa16.47■□□□□ 0.23
SRRM1-205ENST00000462710 PRG4Q92954 1404 aaPredicted RBP16.47■□□□□ 0.23
SRRM1-205ENST00000462710 CUL7Q14999 1698 aa16.43■□□□□ 0.22
SRRM1-205ENST00000462710 ADCY10Q96PN6 1610 aa16.41■□□□□ 0.22
SRRM1-205ENST00000462710 KIAA0586Q9BVV6 1533 aa16.41■□□□□ 0.22
SRRM1-205ENST00000462710 JPH4Q96JJ6 628 aa16.39■□□□□ 0.21
SRRM1-205ENST00000462710 GLI2P10070 1586 aa16.38■□□□□ 0.21
SRRM1-205ENST00000462710 KDM6BO15054 1643 aa16.35■□□□□ 0.21
SRRM1-205ENST00000462710 UHRF1BP1LA0JNW5 1464 aa16.32■□□□□ 0.2
SRRM1-205ENST00000462710 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
SRRM1-205ENST00000462710 FAM69CQ0P6D2 419 aa16.26■□□□□ 0.19
SRRM1-205ENST00000462710 PLB1Q6P1J6 1458 aa16.26■□□□□ 0.19
SRRM1-205ENST00000462710 PPRC1Q5VV67 1664 aaKnown RBP16.25■□□□□ 0.19
SRRM1-205ENST00000462710 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
SRRM1-205ENST00000462710 IGF1RP08069 1367 aa16.25■□□□□ 0.19
SRRM1-205ENST00000462710 ABCC2Q92887 1545 aa16.24■□□□□ 0.19
SRRM1-205ENST00000462710 TNIKQ9UKE5 1360 aa16.21■□□□□ 0.19
SRRM1-205ENST00000462710 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
SRRM1-205ENST00000462710 MAP3K4Q9Y6R4 1608 aa16.19■□□□□ 0.18
SRRM1-205ENST00000462710 PTPRGP23470 1445 aa16.18■□□□□ 0.18
SRRM1-205ENST00000462710 KDM4FA0A1W2PPD8 638 aa16.17■□□□□ 0.18
SRRM1-205ENST00000462710 IQGAP2Q13576 1575 aa16.17■□□□□ 0.18
SRRM1-205ENST00000462710 KDM5BQ9UGL1 1544 aa16.16■□□□□ 0.18
SRRM1-205ENST00000462710 UGGT2Q9NYU1 1516 aa16.15■□□□□ 0.18
SRRM1-205ENST00000462710 TSPOAP1O95153 1857 aa16.14■□□□□ 0.17
SRRM1-205ENST00000462710 TEX14Q8IWB6 1497 aa16.14■□□□□ 0.17
SRRM1-205ENST00000462710 ASXL2Q76L83 1435 aa16.12■□□□□ 0.17
SRRM1-205ENST00000462710 UACAQ9BZF9 1416 aa16.11■□□□□ 0.17
SRRM1-205ENST00000462710 CARMIL1Q5VZK9 1371 aa16.11■□□□□ 0.17
SRRM1-205ENST00000462710 EPRSP07814 1512 aaKnown RBP16.1■□□□□ 0.17
SRRM1-205ENST00000462710 DISP1Q96F81 1524 aa16.09■□□□□ 0.17
SRRM1-205ENST00000462710 ADGRL1O94910 1474 aa16.06■□□□□ 0.16
SRRM1-205ENST00000462710 ZCCHC11Q5TAX3 1644 aaKnown RBP16.06■□□□□ 0.16
SRRM1-205ENST00000462710 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
SRRM1-205ENST00000462710 CFAP43Q8NDM7 1665 aa16.05■□□□□ 0.16
SRRM1-205ENST00000462710 KIAA0556O60303 1618 aa16.05■□□□□ 0.16
SRRM1-205ENST00000462710 MAGI3Q5TCQ9 1506 aa16.04■□□□□ 0.16
SRRM1-205ENST00000462710 RAPGEF2Q9Y4G8 1499 aa16■□□□□ 0.15
SRRM1-205ENST00000462710 WDR7Q9Y4E6 1490 aa15.98■□□□□ 0.15
SRRM1-205ENST00000462710 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
SRRM1-205ENST00000462710 COL17A1Q9UMD9 1497 aaPredicted RBP15.97■□□□□ 0.15
SRRM1-205ENST00000462710 ABCA8O94911 1581 aa15.97■□□□□ 0.15
SRRM1-205ENST00000462710 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
SRRM1-205ENST00000462710 HECW2Q9P2P5 1572 aa15.95■□□□□ 0.14
SRRM1-205ENST00000462710 PHLDB1Q86UU1 1377 aa15.94■□□□□ 0.14
SRRM1-205ENST00000462710 ARAP3Q8WWN8 1544 aa15.92■□□□□ 0.14
SRRM1-205ENST00000462710 ILDR1Q86SU0 546 aaPredicted RBP15.9■□□□□ 0.14
SRRM1-205ENST00000462710 CD109Q6YHK3 1445 aa15.84■□□□□ 0.13
SRRM1-205ENST00000462710 ABCA9Q8IUA7 1624 aa15.84■□□□□ 0.13
SRRM1-205ENST00000462710 ADAMTSL3P82987 1691 aa15.84■□□□□ 0.13
SRRM1-205ENST00000462710 PRXQ9BXM0 1461 aa15.8■□□□□ 0.12
SRRM1-205ENST00000462710 NEO1Q92859 1461 aa15.79■□□□□ 0.12
SRRM1-205ENST00000462710 KIF21BO75037 1637 aa15.77■□□□□ 0.12
SRRM1-205ENST00000462710 SAMD9Q5K651 1589 aa15.75■□□□□ 0.11
SRRM1-205ENST00000462710 BCORL1Q5H9F3 1711 aa15.74■□□□□ 0.11
SRRM1-205ENST00000462710 CFAP74Q9C0B2 1584 aa15.72■□□□□ 0.11
SRRM1-205ENST00000462710 ATP10BO94823 1461 aa15.71■□□□□ 0.1
SRRM1-205ENST00000462710 FBXO41Q8TF61 875 aa15.7■□□□□ 0.1
SRRM1-205ENST00000462710 FRMPD1Q5SYB0 1578 aa15.7■□□□□ 0.1
SRRM1-205ENST00000462710 RAPGEF6Q8TEU7 1601 aa15.69■□□□□ 0.1
SRRM1-205ENST00000462710 PTPRMP28827 1452 aa15.69■□□□□ 0.1
SRRM1-205ENST00000462710 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
SRRM1-205ENST00000462710 ARHGEF40Q8TER5 1519 aa15.67■□□□□ 0.1
SRRM1-205ENST00000462710 ZMYM4Q5VZL5 1548 aa15.67■□□□□ 0.1
SRRM1-205ENST00000462710 PCF11O94913 1555 aaKnown RBP15.65■□□□□ 0.1
SRRM1-205ENST00000462710 RICTORQ6R327 1708 aa15.63■□□□□ 0.09
SRRM1-205ENST00000462710 FHOD3Q2V2M9 1422 aa15.63■□□□□ 0.09
SRRM1-205ENST00000462710 TTBK1Q5TCY1 1321 aaPredicted RBP15.62■□□□□ 0.09
SRRM1-205ENST00000462710 MAGI2Q86UL8 1455 aa15.62■□□□□ 0.09
SRRM1-205ENST00000462710 MADDQ8WXG6 1647 aa15.59■□□□□ 0.09
SRRM1-205ENST00000462710 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
SRRM1-205ENST00000462710 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.08
SRRM1-205ENST00000462710 EEA1Q15075 1411 aa15.58■□□□□ 0.08
SRRM1-205ENST00000462710 DENND4BO75064 1496 aaPredicted RBP15.56■□□□□ 0.08
SRRM1-205ENST00000462710 FANCAO15360 1455 aa15.55■□□□□ 0.08
SRRM1-205ENST00000462710 NUP153P49790 1475 aaKnown RBP15.55■□□□□ 0.08
SRRM1-205ENST00000462710 POGZQ7Z3K3 1410 aa15.55■□□□□ 0.08
SRRM1-205ENST00000462710 KCNH8Q96L42 1107 aa15.54■□□□□ 0.08
SRRM1-205ENST00000462710 TTC37Q6PGP7 1564 aa15.54■□□□□ 0.08
SRRM1-205ENST00000462710 RIMS1Q86UR5 1692 aaKnown RBP15.53■□□□□ 0.08
SRRM1-205ENST00000462710 AKNAQ7Z591 1439 aa15.53■□□□□ 0.08
SRRM1-205ENST00000462710 ZFYVE16Q7Z3T8 1539 aa15.51■□□□□ 0.07
SRRM1-205ENST00000462710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.49■□□□□ 0.07
SRRM1-205ENST00000462710 REREQ9P2R6 1566 aa15.48■□□□□ 0.07
SRRM1-205ENST00000462710 ARHGEF12Q9NZN5 1544 aa15.48■□□□□ 0.07
SRRM1-205ENST00000462710 FER1L4A9Z1Z3 1794 aa15.46■□□□□ 0.07
SRRM1-205ENST00000462710 PREX1Q8TCU6 1659 aa15.46■□□□□ 0.07
SRRM1-205ENST00000462710 HECW1Q76N89 1606 aa15.43■□□□□ 0.06
SRRM1-205ENST00000462710 PLCH2O75038 1416 aa15.42■□□□□ 0.06
SRRM1-205ENST00000462710 SIGLEC1Q9BZZ2 1709 aa15.42■□□□□ 0.06
SRRM1-205ENST00000462710 RAPGEF3O95398 923 aa15.42■□□□□ 0.06
SRRM1-205ENST00000462710 CSRNP3Q8WYN3 585 aa15.42■□□□□ 0.06
SRRM1-205ENST00000462710 PLEKHD1A6NEE1 506 aa15.41■□□□□ 0.06
SRRM1-205ENST00000462710 ATP10AO60312 1499 aa15.4■□□□□ 0.06
SRRM1-205ENST00000462710 IQSEC2Q5JU85 1478 aa15.4■□□□□ 0.06
SRRM1-205ENST00000462710 C9orf84Q5VXU9 1444 aa15.4■□□□□ 0.06
SRRM1-205ENST00000462710 KDM5CP41229 1560 aa15.4■□□□□ 0.06
SRRM1-205ENST00000462710 MYO5CQ9NQX4 1742 aa15.39■□□□□ 0.05
SRRM1-205ENST00000462710 AGLP35573 1532 aa15.36■□□□□ 0.05
SRRM1-205ENST00000462710 PTPRTO14522 1441 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms