RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 KIAA0586Q9BVV6 1533 aa31.89■■■□□ 2.7
COL9A3-203ENST00000462700 JPH4Q96JJ6 628 aa31.87■■■□□ 2.69
COL9A3-203ENST00000462700 RAPGEF2Q9Y4G8 1499 aa31.84■■■□□ 2.69
COL9A3-203ENST00000462700 PRG4Q92954 1404 aaPredicted RBP31.84■■■□□ 2.69
COL9A3-203ENST00000462700 PRXQ9BXM0 1461 aa31.71■■■□□ 2.67
COL9A3-203ENST00000462700 CHIC1Q5VXU3 224 aa31.69■■■□□ 2.66
COL9A3-203ENST00000462700 IQGAP2Q13576 1575 aa31.68■■■□□ 2.66
COL9A3-203ENST00000462700 EEA1Q15075 1411 aa31.65■■■□□ 2.66
COL9A3-203ENST00000462700 CSRNP3Q8WYN3 585 aa31.62■■■□□ 2.65
COL9A3-203ENST00000462700 CARMIL2Q6F5E8 1435 aa31.54■■■□□ 2.64
COL9A3-203ENST00000462700 UGGT2Q9NYU1 1516 aa31.52■■■□□ 2.64
COL9A3-203ENST00000462700 CTTNBP2Q8WZ74 1663 aa31.51■■■□□ 2.64
COL9A3-203ENST00000462700 DISP1Q96F81 1524 aa31.49■■■□□ 2.63
COL9A3-203ENST00000462700 FAM9AQ8IZU1 332 aaPredicted RBP31.48■■■□□ 2.63
COL9A3-203ENST00000462700 TNIKQ9UKE5 1360 aa31.45■■■□□ 2.63
COL9A3-203ENST00000462700 TRHP20396 242 aaPredicted RBP31.45■■■□□ 2.63
COL9A3-203ENST00000462700 PTPRGP23470 1445 aa31.44■■■□□ 2.62
COL9A3-203ENST00000462700 KIAA0556O60303 1618 aa31.39■■■□□ 2.62
COL9A3-203ENST00000462700 ADCY10Q96PN6 1610 aa31.38■■■□□ 2.61
COL9A3-203ENST00000462700 TTBK1Q5TCY1 1321 aaPredicted RBP31.35■■■□□ 2.61
COL9A3-203ENST00000462700 KIF21BO75037 1637 aa31.33■■■□□ 2.61
COL9A3-203ENST00000462700 GOLGA3Q08378 1498 aa31.32■■■□□ 2.6
COL9A3-203ENST00000462700 NPM1P06748 294 aaKnown RBP eCLIP31.28■■■□□ 2.6
COL9A3-203ENST00000462700 UACAQ9BZF9 1416 aa31.24■■■□□ 2.59
COL9A3-203ENST00000462700 UHRF1BP1LA0JNW5 1464 aa31.22■■■□□ 2.59
COL9A3-203ENST00000462700 MAPKBP1O60336 1514 aa31.22■■■□□ 2.59
COL9A3-203ENST00000462700 ABCC2Q92887 1545 aa31.19■■■□□ 2.58
COL9A3-203ENST00000462700 SAMD9Q5K651 1589 aa31.14■■■□□ 2.58
COL9A3-203ENST00000462700 PLB1Q6P1J6 1458 aa31.1■■■□□ 2.57
COL9A3-203ENST00000462700 P3H3Q8IVL6 736 aa31.09■■■□□ 2.57
COL9A3-203ENST00000462700 ABCC10Q5T3U5 1492 aa31.08■■■□□ 2.57
COL9A3-203ENST00000462700 EHMT2Q96KQ7 1210 aa31.08■■■□□ 2.57
COL9A3-203ENST00000462700 KDM5BQ9UGL1 1544 aa31.08■■■□□ 2.57
COL9A3-203ENST00000462700 KIF13AQ9H1H9 1805 aa31.05■■■□□ 2.56
COL9A3-203ENST00000462700 ABCA8O94911 1581 aa31.05■■■□□ 2.56
COL9A3-203ENST00000462700 UBTFP17480 764 aaKnown RBP31.04■■■□□ 2.56
COL9A3-203ENST00000462700 RANGAP1P46060 587 aaPredicted RBP31.04■■■□□ 2.56
COL9A3-203ENST00000462700 DIP2BQ9P265 1576 aa31.03■■■□□ 2.56
COL9A3-203ENST00000462700 ASXL2Q76L83 1435 aa31■■■□□ 2.55
COL9A3-203ENST00000462700 FAM69CQ0P6D2 419 aa31■■■□□ 2.55
COL9A3-203ENST00000462700 ZCCHC11Q5TAX3 1644 aaKnown RBP30.99■■■□□ 2.55
COL9A3-203ENST00000462700 EFCAB5A4FU69 1503 aa30.98■■■□□ 2.55
COL9A3-203ENST00000462700 FHOD3Q2V2M9 1422 aa30.96■■■□□ 2.55
COL9A3-203ENST00000462700 RAPGEF6Q8TEU7 1601 aa30.86■■■□□ 2.53
COL9A3-203ENST00000462700 GLI2P10070 1586 aa30.83■■■□□ 2.53
COL9A3-203ENST00000462700 EPRSP07814 1512 aaKnown RBP30.83■■■□□ 2.53
COL9A3-203ENST00000462700 WDR7Q9Y4E6 1490 aa30.82■■■□□ 2.53
COL9A3-203ENST00000462700 ARHGAP35Q9NRY4 1499 aa30.81■■■□□ 2.52
COL9A3-203ENST00000462700 ATP10BO94823 1461 aa30.8■■■□□ 2.52
COL9A3-203ENST00000462700 ARID3CA6NKF2 412 aa30.78■■■□□ 2.52
COL9A3-203ENST00000462700 NUP153P49790 1475 aaKnown RBP30.76■■■□□ 2.52
COL9A3-203ENST00000462700 TSPOAP1O95153 1857 aa30.7■■■□□ 2.5
COL9A3-203ENST00000462700 FMN1Q68DA7 1419 aa30.69■■■□□ 2.5
COL9A3-203ENST00000462700 MAP3K4Q9Y6R4 1608 aa30.68■■■□□ 2.5
COL9A3-203ENST00000462700 KCNH8Q96L42 1107 aa30.65■■■□□ 2.5
COL9A3-203ENST00000462700 PPRC1Q5VV67 1664 aaKnown RBP30.65■■■□□ 2.5
COL9A3-203ENST00000462700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.63■■■□□ 2.49
COL9A3-203ENST00000462700 HNRNPUL2Q1KMD3 747 aaKnown RBP30.63■■■□□ 2.49
COL9A3-203ENST00000462700 CLIP1P30622 1438 aa30.57■■■□□ 2.48
COL9A3-203ENST00000462700 CFAP43Q8NDM7 1665 aa30.56■■■□□ 2.48
COL9A3-203ENST00000462700 KDM6BO15054 1643 aa30.56■■■□□ 2.48
COL9A3-203ENST00000462700 HECW1Q76N89 1606 aa30.55■■■□□ 2.48
COL9A3-203ENST00000462700 TEX14Q8IWB6 1497 aa30.55■■■□□ 2.48
COL9A3-203ENST00000462700 CD109Q6YHK3 1445 aa30.55■■■□□ 2.48
COL9A3-203ENST00000462700 CDK13Q14004 1512 aaKnown RBP30.53■■■□□ 2.48
COL9A3-203ENST00000462700 MAGI3Q5TCQ9 1506 aa30.51■■■□□ 2.47
COL9A3-203ENST00000462700 PLEKHD1A6NEE1 506 aa30.5■■■□□ 2.47
COL9A3-203ENST00000462700 ATP1B4Q9UN42 357 aaPredicted RBP30.5■■■□□ 2.47
COL9A3-203ENST00000462700 ABCA9Q8IUA7 1624 aa30.48■■■□□ 2.47
COL9A3-203ENST00000462700 PCF11O94913 1555 aaKnown RBP30.44■■■□□ 2.46
COL9A3-203ENST00000462700 CASKIN1Q8WXD9 1431 aa30.43■■■□□ 2.46
COL9A3-203ENST00000462700 CEP162Q5TB80 1403 aa30.4■■■□□ 2.46
COL9A3-203ENST00000462700 COL17A1Q9UMD9 1497 aaPredicted RBP30.39■■■□□ 2.46
COL9A3-203ENST00000462700 LOC105371045A0A1W2PR82 267 aa30.38■■■□□ 2.45
COL9A3-203ENST00000462700 LRRIQ1Q96JM4 1722 aa30.36■■■□□ 2.45
COL9A3-203ENST00000462700 FYCO1Q9BQS8 1478 aa30.36■■■□□ 2.45
COL9A3-203ENST00000462700 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.34■■■□□ 2.45
COL9A3-203ENST00000462700 CDK11AQ9UQ88 783 aaPredicted RBP30.34■■■□□ 2.45
COL9A3-203ENST00000462700 CCDC18Q5T9S5 1454 aa30.33■■■□□ 2.45
COL9A3-203ENST00000462700 TTC37Q6PGP7 1564 aa30.29■■■□□ 2.44
COL9A3-203ENST00000462700 TROQ12816 1431 aaPredicted RBP30.28■■■□□ 2.44
COL9A3-203ENST00000462700 PHLDB1Q86UU1 1377 aa30.26■■■□□ 2.43
COL9A3-203ENST00000462700 NEO1Q92859 1461 aa30.25■■■□□ 2.43
COL9A3-203ENST00000462700 ARAP3Q8WWN8 1544 aa30.24■■■□□ 2.43
COL9A3-203ENST00000462700 KIF14Q15058 1648 aa30.22■■■□□ 2.43
COL9A3-203ENST00000462700 FANCAO15360 1455 aa30.17■■■□□ 2.42
COL9A3-203ENST00000462700 PLCH2O75038 1416 aa30.15■■■□□ 2.42
COL9A3-203ENST00000462700 CFAP74Q9C0B2 1584 aa30.15■■■□□ 2.42
COL9A3-203ENST00000462700 AKNAQ7Z591 1439 aa30.12■■■□□ 2.41
COL9A3-203ENST00000462700 MYO5CQ9NQX4 1742 aa30.09■■■□□ 2.41
COL9A3-203ENST00000462700 RAPGEF3O95398 923 aa30.07■■■□□ 2.4
COL9A3-203ENST00000462700 VPS8Q8N3P4 1428 aa30.05■■■□□ 2.4
COL9A3-203ENST00000462700 FRMPD1Q5SYB0 1578 aa30.05■■■□□ 2.4
COL9A3-203ENST00000462700 DENND4BO75064 1496 aaPredicted RBP30.04■■■□□ 2.4
COL9A3-203ENST00000462700 EFCAB2Q5VUJ9 269 aa30.02■■■□□ 2.4
COL9A3-203ENST00000462700 ARHGAP5Q13017 1502 aa30.01■■■□□ 2.39
COL9A3-203ENST00000462700 ADGRL1O94910 1474 aa30■■■□□ 2.39
COL9A3-203ENST00000462700 MTUS2Q5JR59 1369 aa30■■■□□ 2.39
COL9A3-203ENST00000462700 PREX2Q70Z35 1606 aa29.97■■■□□ 2.39
COL9A3-203ENST00000462700 RICTORQ6R327 1708 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms