RNA–Protein interactions for RNA: ENST00000462457.1

SGSM3-205, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-205ENST00000462457 KIAA0586Q9BVV6 1533 aa25.2■■□□□ 1.62
SGSM3-205ENST00000462457 RAPGEF2Q9Y4G8 1499 aa25.19■■□□□ 1.62
SGSM3-205ENST00000462457 PRG4Q92954 1404 aaPredicted RBP25.18■■□□□ 1.62
SGSM3-205ENST00000462457 ERCC6L2Q5T890 1561 aa25.12■■□□□ 1.61
SGSM3-205ENST00000462457 EEA1Q15075 1411 aa25.08■■□□□ 1.61
SGSM3-205ENST00000462457 IQGAP2Q13576 1575 aa25.07■■□□□ 1.6
SGSM3-205ENST00000462457 CARMIL2Q6F5E8 1435 aa25.04■■□□□ 1.6
SGSM3-205ENST00000462457 CSRNP3Q8WYN3 585 aa25.04■■□□□ 1.6
SGSM3-205ENST00000462457 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
SGSM3-205ENST00000462457 TRHP20396 242 aaPredicted RBP25.01■■□□□ 1.59
SGSM3-205ENST00000462457 CTTNBP2Q8WZ74 1663 aa25■■□□□ 1.59
SGSM3-205ENST00000462457 PRXQ9BXM0 1461 aa24.98■■□□□ 1.59
SGSM3-205ENST00000462457 FAM9AQ8IZU1 332 aaPredicted RBP24.96■■□□□ 1.59
SGSM3-205ENST00000462457 NPM1P06748 294 aaKnown RBP eCLIP24.93■■□□□ 1.58
SGSM3-205ENST00000462457 TTBK1Q5TCY1 1321 aaPredicted RBP24.91■■□□□ 1.58
SGSM3-205ENST00000462457 PTPRGP23470 1445 aa24.89■■□□□ 1.58
SGSM3-205ENST00000462457 TNIKQ9UKE5 1360 aa24.89■■□□□ 1.57
SGSM3-205ENST00000462457 UGGT2Q9NYU1 1516 aa24.88■■□□□ 1.57
SGSM3-205ENST00000462457 GOLGA3Q08378 1498 aa24.85■■□□□ 1.57
SGSM3-205ENST00000462457 KIAA0556O60303 1618 aa24.8■■□□□ 1.56
SGSM3-205ENST00000462457 DISP1Q96F81 1524 aa24.8■■□□□ 1.56
SGSM3-205ENST00000462457 KIF21BO75037 1637 aa24.77■■□□□ 1.56
SGSM3-205ENST00000462457 ADCY10Q96PN6 1610 aa24.75■■□□□ 1.55
SGSM3-205ENST00000462457 UACAQ9BZF9 1416 aa24.69■■□□□ 1.54
SGSM3-205ENST00000462457 UBTFP17480 764 aaKnown RBP24.68■■□□□ 1.54
SGSM3-205ENST00000462457 UHRF1BP1LA0JNW5 1464 aa24.65■■□□□ 1.54
SGSM3-205ENST00000462457 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
SGSM3-205ENST00000462457 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
SGSM3-205ENST00000462457 MAPKBP1O60336 1514 aa24.65■■□□□ 1.54
SGSM3-205ENST00000462457 ABCC2Q92887 1545 aa24.65■■□□□ 1.54
SGSM3-205ENST00000462457 P3H3Q8IVL6 736 aa24.62■■□□□ 1.53
SGSM3-205ENST00000462457 FAM69CQ0P6D2 419 aa24.57■■□□□ 1.52
SGSM3-205ENST00000462457 SAMD9Q5K651 1589 aa24.57■■□□□ 1.52
SGSM3-205ENST00000462457 KIF13AQ9H1H9 1805 aa24.56■■□□□ 1.52
SGSM3-205ENST00000462457 ABCC10Q5T3U5 1492 aa24.55■■□□□ 1.52
SGSM3-205ENST00000462457 PLB1Q6P1J6 1458 aa24.54■■□□□ 1.52
SGSM3-205ENST00000462457 EFCAB5A4FU69 1503 aa24.53■■□□□ 1.52
SGSM3-205ENST00000462457 KDM5BQ9UGL1 1544 aa24.51■■□□□ 1.51
SGSM3-205ENST00000462457 ZCCHC11Q5TAX3 1644 aaKnown RBP24.51■■□□□ 1.51
SGSM3-205ENST00000462457 ABCA8O94911 1581 aa24.5■■□□□ 1.51
SGSM3-205ENST00000462457 ASXL2Q76L83 1435 aa24.5■■□□□ 1.51
SGSM3-205ENST00000462457 DIP2BQ9P265 1576 aa24.5■■□□□ 1.51
SGSM3-205ENST00000462457 FHOD3Q2V2M9 1422 aa24.44■■□□□ 1.5
SGSM3-205ENST00000462457 RAPGEF6Q8TEU7 1601 aa24.43■■□□□ 1.5
SGSM3-205ENST00000462457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.41■■□□□ 1.5
SGSM3-205ENST00000462457 HNRNPUL2Q1KMD3 747 aaKnown RBP24.41■■□□□ 1.5
SGSM3-205ENST00000462457 TSPOAP1O95153 1857 aa24.4■■□□□ 1.5
SGSM3-205ENST00000462457 WDR7Q9Y4E6 1490 aa24.38■■□□□ 1.49
SGSM3-205ENST00000462457 ARID3CA6NKF2 412 aa24.37■■□□□ 1.49
SGSM3-205ENST00000462457 GLI2P10070 1586 aa24.36■■□□□ 1.49
SGSM3-205ENST00000462457 EPRSP07814 1512 aaKnown RBP24.34■■□□□ 1.49
SGSM3-205ENST00000462457 FMN1Q68DA7 1419 aa24.33■■□□□ 1.49
SGSM3-205ENST00000462457 KCNH8Q96L42 1107 aa24.32■■□□□ 1.48
SGSM3-205ENST00000462457 ATP1B4Q9UN42 357 aaPredicted RBP24.3■■□□□ 1.48
SGSM3-205ENST00000462457 ATP10BO94823 1461 aa24.3■■□□□ 1.48
SGSM3-205ENST00000462457 ARHGAP35Q9NRY4 1499 aa24.29■■□□□ 1.48
SGSM3-205ENST00000462457 NUP153P49790 1475 aaKnown RBP24.25■■□□□ 1.47
SGSM3-205ENST00000462457 TEX14Q8IWB6 1497 aa24.25■■□□□ 1.47
SGSM3-205ENST00000462457 MAP3K4Q9Y6R4 1608 aa24.24■■□□□ 1.47
SGSM3-205ENST00000462457 PLEKHD1A6NEE1 506 aa24.23■■□□□ 1.47
SGSM3-205ENST00000462457 HECW1Q76N89 1606 aa24.23■■□□□ 1.47
SGSM3-205ENST00000462457 CFAP43Q8NDM7 1665 aa24.23■■□□□ 1.47
SGSM3-205ENST00000462457 KDM6BO15054 1643 aa24.22■■□□□ 1.47
SGSM3-205ENST00000462457 CLIP1P30622 1438 aa24.19■■□□□ 1.46
SGSM3-205ENST00000462457 CD109Q6YHK3 1445 aa24.18■■□□□ 1.46
SGSM3-205ENST00000462457 CDK11AQ9UQ88 783 aaPredicted RBP24.17■■□□□ 1.46
SGSM3-205ENST00000462457 PPRC1Q5VV67 1664 aaKnown RBP24.15■■□□□ 1.46
SGSM3-205ENST00000462457 ABCA9Q8IUA7 1624 aa24.1■■□□□ 1.45
SGSM3-205ENST00000462457 CDK13Q14004 1512 aaKnown RBP24.1■■□□□ 1.45
SGSM3-205ENST00000462457 MAGI3Q5TCQ9 1506 aa24.1■■□□□ 1.45
SGSM3-205ENST00000462457 CASKIN1Q8WXD9 1431 aa24.05■■□□□ 1.44
SGSM3-205ENST00000462457 CCDC18Q5T9S5 1454 aa24.05■■□□□ 1.44
SGSM3-205ENST00000462457 PCF11O94913 1555 aaKnown RBP24.04■■□□□ 1.44
SGSM3-205ENST00000462457 CEP162Q5TB80 1403 aa24.03■■□□□ 1.44
SGSM3-205ENST00000462457 FYCO1Q9BQS8 1478 aa24.02■■□□□ 1.44
SGSM3-205ENST00000462457 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
SGSM3-205ENST00000462457 PHLDB1Q86UU1 1377 aa24■■□□□ 1.43
SGSM3-205ENST00000462457 KIF14Q15058 1648 aa23.96■■□□□ 1.43
SGSM3-205ENST00000462457 LRRIQ1Q96JM4 1722 aa23.96■■□□□ 1.43
SGSM3-205ENST00000462457 CFAP74Q9C0B2 1584 aa23.95■■□□□ 1.43
SGSM3-205ENST00000462457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.95■■□□□ 1.43
SGSM3-205ENST00000462457 NEO1Q92859 1461 aa23.94■■□□□ 1.42
SGSM3-205ENST00000462457 TROQ12816 1431 aaPredicted RBP23.94■■□□□ 1.42
SGSM3-205ENST00000462457 TTC37Q6PGP7 1564 aa23.91■■□□□ 1.42
SGSM3-205ENST00000462457 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
SGSM3-205ENST00000462457 MYO5CQ9NQX4 1742 aa23.9■■□□□ 1.42
SGSM3-205ENST00000462457 ARAP3Q8WWN8 1544 aa23.89■■□□□ 1.41
SGSM3-205ENST00000462457 FANCAO15360 1455 aa23.88■■□□□ 1.41
SGSM3-205ENST00000462457 COL17A1Q9UMD9 1497 aaPredicted RBP23.88■■□□□ 1.41
SGSM3-205ENST00000462457 PLCH2O75038 1416 aa23.84■■□□□ 1.41
SGSM3-205ENST00000462457 EFCAB2Q5VUJ9 269 aa23.83■■□□□ 1.41
SGSM3-205ENST00000462457 AKNAQ7Z591 1439 aa23.83■■□□□ 1.4
SGSM3-205ENST00000462457 MTUS2Q5JR59 1369 aa23.81■■□□□ 1.4
SGSM3-205ENST00000462457 ARHGAP5Q13017 1502 aa23.79■■□□□ 1.4
SGSM3-205ENST00000462457 DENND4BO75064 1496 aaPredicted RBP23.79■■□□□ 1.4
SGSM3-205ENST00000462457 RAPGEF3O95398 923 aa23.77■■□□□ 1.4
SGSM3-205ENST00000462457 VPS8Q8N3P4 1428 aa23.76■■□□□ 1.39
SGSM3-205ENST00000462457 ADGRL1O94910 1474 aa23.76■■□□□ 1.39
SGSM3-205ENST00000462457 APLP2Q06481 763 aa23.72■■□□□ 1.39
SGSM3-205ENST00000462457 PREX2Q70Z35 1606 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms