RNA–Protein interactions for RNA: ENST00000462457.1

SGSM3-205, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-205ENST00000462457 NISCHQ9Y2I1 1504 aa36.31■■■■□ 3.4
SGSM3-205ENST00000462457 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
SGSM3-205ENST00000462457 ABCC9O60706 1549 aa31.75■■■□□ 2.67
SGSM3-205ENST00000462457 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
SGSM3-205ENST00000462457 DCAF8L2P0C7V8 631 aa30.56■■■□□ 2.48
SGSM3-205ENST00000462457 NACADO15069 1562 aa30.48■■■□□ 2.47
SGSM3-205ENST00000462457 MYO15BQ96JP2 1530 aa30.21■■■□□ 2.43
SGSM3-205ENST00000462457 ZCCHC6Q5VYS8 1495 aaKnown RBP30.2■■■□□ 2.43
SGSM3-205ENST00000462457 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
SGSM3-205ENST00000462457 UNC13AQ9UPW8 1703 aa29.79■■■□□ 2.36
SGSM3-205ENST00000462457 PABPN1Q86U42 306 aaKnown RBP eCLIP29.64■■■□□ 2.34
SGSM3-205ENST00000462457 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
SGSM3-205ENST00000462457 BICRAQ9NZM4 1560 aa29.47■■■□□ 2.31
SGSM3-205ENST00000462457 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
SGSM3-205ENST00000462457 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
SGSM3-205ENST00000462457 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
SGSM3-205ENST00000462457 CC2D2AQ9P2K1 1620 aa28.71■■■□□ 2.19
SGSM3-205ENST00000462457 CECR2Q9BXF3 1484 aa28.55■■■□□ 2.16
SGSM3-205ENST00000462457 SMARCA4P51532 1647 aa28.22■■■□□ 2.11
SGSM3-205ENST00000462457 BAZ1AQ9NRL2 1556 aaPredicted RBP28.22■■■□□ 2.11
SGSM3-205ENST00000462457 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
SGSM3-205ENST00000462457 NCAPD3P42695 1498 aa28.06■■■□□ 2.08
SGSM3-205ENST00000462457 ATAD2BQ9ULI0 1458 aa28.05■■■□□ 2.08
SGSM3-205ENST00000462457 HMGXB3Q12766 1538 aa27.95■■■□□ 2.06
SGSM3-205ENST00000462457 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
SGSM3-205ENST00000462457 BAZ1BQ9UIG0 1483 aaKnown RBP27.91■■■□□ 2.06
SGSM3-205ENST00000462457 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
SGSM3-205ENST00000462457 WIZO95785 1651 aa27.69■■■□□ 2.02
SGSM3-205ENST00000462457 RSF1Q96T23 1441 aaPredicted RBP27.59■■■□□ 2.01
SGSM3-205ENST00000462457 ERCC6Q03468 1493 aa27.49■■□□□ 1.99
SGSM3-205ENST00000462457 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
SGSM3-205ENST00000462457 LAMC3Q9Y6N6 1575 aa27.41■■□□□ 1.98
SGSM3-205ENST00000462457 NESP48681 1621 aa27.38■■□□□ 1.97
SGSM3-205ENST00000462457 PDS5BQ9NTI5 1447 aa27.26■■□□□ 1.95
SGSM3-205ENST00000462457 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
SGSM3-205ENST00000462457 CUX2O14529 1486 aa27.15■■□□□ 1.94
SGSM3-205ENST00000462457 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.93
SGSM3-205ENST00000462457 CFTRP13569 1480 aa27.06■■□□□ 1.92
SGSM3-205ENST00000462457 CCDC88BA6NC98 1476 aa27.05■■□□□ 1.92
SGSM3-205ENST00000462457 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.92
SGSM3-205ENST00000462457 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
SGSM3-205ENST00000462457 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
SGSM3-205ENST00000462457 FANCD2Q9BXW9 1451 aa26.97■■□□□ 1.91
SGSM3-205ENST00000462457 PRDM2Q13029 1718 aa26.96■■□□□ 1.91
SGSM3-205ENST00000462457 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
SGSM3-205ENST00000462457 WDR62O43379 1518 aa26.81■■□□□ 1.88
SGSM3-205ENST00000462457 URB2Q14146 1524 aaKnown RBP26.64■■□□□ 1.85
SGSM3-205ENST00000462457 ABCC8Q09428 1581 aa26.61■■□□□ 1.85
SGSM3-205ENST00000462457 TOPBP1Q92547 1522 aa26.51■■□□□ 1.83
SGSM3-205ENST00000462457 DNMBPQ6XZF7 1577 aa26.5■■□□□ 1.83
SGSM3-205ENST00000462457 IFT140Q96RY7 1462 aa26.41■■□□□ 1.82
SGSM3-205ENST00000462457 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
SGSM3-205ENST00000462457 POLA1P09884 1462 aaPredicted RBP26.26■■□□□ 1.79
SGSM3-205ENST00000462457 CUX1P39880 1505 aa26.24■■□□□ 1.79
SGSM3-205ENST00000462457 SOGA1O94964 1423 aa26.22■■□□□ 1.79
SGSM3-205ENST00000462457 FGD5Q6ZNL6 1462 aa26.21■■□□□ 1.79
SGSM3-205ENST00000462457 ZNF608Q9ULD9 1512 aaPredicted RBP26.19■■□□□ 1.78
SGSM3-205ENST00000462457 TARBP1Q13395 1621 aaKnown RBP26.19■■□□□ 1.78
SGSM3-205ENST00000462457 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
SGSM3-205ENST00000462457 RAD54L2Q9Y4B4 1467 aa26.14■■□□□ 1.78
SGSM3-205ENST00000462457 WRNQ14191 1432 aaPredicted RBP eCLIP26.11■■□□□ 1.77
SGSM3-205ENST00000462457 WDR97A6NE52 1622 aa26.09■■□□□ 1.77
SGSM3-205ENST00000462457 AQRO60306 1485 aaKnown RBP eCLIP26.08■■□□□ 1.775e-7■■■□□ 18.3
SGSM3-205ENST00000462457 OSCARQ8IYS5 282 aa26.06■■□□□ 1.76
SGSM3-205ENST00000462457 TOP2BQ02880 1626 aa26.04■■□□□ 1.76
SGSM3-205ENST00000462457 BIVM-ERCC5R4GMW8 1640 aa26.04■■□□□ 1.76
SGSM3-205ENST00000462457 TDRD9Q8NDG6 1382 aaKnown RBP26.04■■□□□ 1.76
SGSM3-205ENST00000462457 SYNJ1O43426 1573 aa25.98■■□□□ 1.75
SGSM3-205ENST00000462457 ABCA10Q8WWZ4 1543 aa25.94■■□□□ 1.74
SGSM3-205ENST00000462457 FBLN2P98095 1184 aa25.94■■□□□ 1.74
SGSM3-205ENST00000462457 GRIN2BQ13224 1484 aa25.92■■□□□ 1.74
SGSM3-205ENST00000462457 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
SGSM3-205ENST00000462457 CHD1O14646 1710 aa25.88■■□□□ 1.73
SGSM3-205ENST00000462457 PBRM1Q86U86 1689 aa25.88■■□□□ 1.73
SGSM3-205ENST00000462457 SNAPC4Q5SXM2 1469 aa25.86■■□□□ 1.73
SGSM3-205ENST00000462457 MAGI1Q96QZ7 1491 aaPredicted RBP25.86■■□□□ 1.73
SGSM3-205ENST00000462457 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
SGSM3-205ENST00000462457 ABCA5Q8WWZ7 1642 aa25.84■■□□□ 1.73
SGSM3-205ENST00000462457 SYNJ2O15056 1496 aa25.75■■□□□ 1.71
SGSM3-205ENST00000462457 ERICH3Q5RHP9 1530 aa25.67■■□□□ 1.7
SGSM3-205ENST00000462457 KIF27Q86VH2 1401 aa25.62■■□□□ 1.69
SGSM3-205ENST00000462457 ADAMTS12P58397 1594 aa25.61■■□□□ 1.69
SGSM3-205ENST00000462457 FHAD1B1AJZ9 1412 aa25.61■■□□□ 1.69
SGSM3-205ENST00000462457 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
SGSM3-205ENST00000462457 RIMBP3CA6NJZ7 1639 aa25.58■■□□□ 1.69
SGSM3-205ENST00000462457 RIMBP3BA6NNM3 1639 aa25.58■■□□□ 1.69
SGSM3-205ENST00000462457 RIMBP3Q9UFD9 1639 aa25.58■■□□□ 1.69
SGSM3-205ENST00000462457 GRIN2AQ12879 1464 aa25.56■■□□□ 1.68
SGSM3-205ENST00000462457 ARHGEF11O15085 1522 aa25.55■■□□□ 1.68
SGSM3-205ENST00000462457 CLASP1Q7Z460 1538 aa25.52■■□□□ 1.68
SGSM3-205ENST00000462457 CUL7Q14999 1698 aa25.47■■□□□ 1.67
SGSM3-205ENST00000462457 IGF1RP08069 1367 aa25.41■■□□□ 1.66
SGSM3-205ENST00000462457 CEP170Q5SW79 1584 aa25.4■■□□□ 1.66
SGSM3-205ENST00000462457 NUP160Q12769 1436 aa25.4■■□□□ 1.66
SGSM3-205ENST00000462457 CYB5RLQ6IPT4 315 aa25.39■■□□□ 1.66
SGSM3-205ENST00000462457 CARMIL1Q5VZK9 1371 aa25.33■■□□□ 1.65
SGSM3-205ENST00000462457 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
SGSM3-205ENST00000462457 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
SGSM3-205ENST00000462457 RUSC2Q8N2Y8 1516 aa25.23■■□□□ 1.63
SGSM3-205ENST00000462457 JPH4Q96JJ6 628 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms