RNA–Protein interactions for RNA: ENST00000462130.1

HDLBP-230, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-230ENST00000462130 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
HDLBP-230ENST00000462130 CEP170Q5SW79 1584 aa17.86■□□□□ 0.45
HDLBP-230ENST00000462130 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
HDLBP-230ENST00000462130 ERCC6L2Q5T890 1561 aa17.84■□□□□ 0.45
HDLBP-230ENST00000462130 NUP160Q12769 1436 aa17.84■□□□□ 0.45
HDLBP-230ENST00000462130 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.45
HDLBP-230ENST00000462130 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
HDLBP-230ENST00000462130 MAPK8IP2Q13387 824 aaPredicted RBP17.74■□□□□ 0.43
HDLBP-230ENST00000462130 JPH4Q96JJ6 628 aa17.7■□□□□ 0.42
HDLBP-230ENST00000462130 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
HDLBP-230ENST00000462130 RUSC2Q8N2Y8 1516 aa17.66■□□□□ 0.42
HDLBP-230ENST00000462130 KIF13AQ9H1H9 1805 aa17.64■□□□□ 0.41
HDLBP-230ENST00000462130 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
HDLBP-230ENST00000462130 KIF27Q86VH2 1401 aa17.6■□□□□ 0.41
HDLBP-230ENST00000462130 CUL7Q14999 1698 aa17.6■□□□□ 0.41
HDLBP-230ENST00000462130 NPM1P06748 294 aaKnown RBP eCLIP17.59■□□□□ 0.41
HDLBP-230ENST00000462130 IGF1RP08069 1367 aa17.57■□□□□ 0.4
HDLBP-230ENST00000462130 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
HDLBP-230ENST00000462130 KIAA0586Q9BVV6 1533 aa17.56■□□□□ 0.4
HDLBP-230ENST00000462130 ADCY10Q96PN6 1610 aa17.51■□□□□ 0.39
HDLBP-230ENST00000462130 FAM69CQ0P6D2 419 aa17.51■□□□□ 0.39
HDLBP-230ENST00000462130 MAPKBP1O60336 1514 aa17.49■□□□□ 0.39
HDLBP-230ENST00000462130 ABCC10Q5T3U5 1492 aa17.49■□□□□ 0.39
HDLBP-230ENST00000462130 CARMIL1Q5VZK9 1371 aa17.48■□□□□ 0.39
HDLBP-230ENST00000462130 DIP2BQ9P265 1576 aa17.46■□□□□ 0.39
HDLBP-230ENST00000462130 TTBK1Q5TCY1 1321 aaPredicted RBP17.45■□□□□ 0.38
HDLBP-230ENST00000462130 TSPOAP1O95153 1857 aa17.44■□□□□ 0.38
HDLBP-230ENST00000462130 PTPRGP23470 1445 aa17.42■□□□□ 0.38
HDLBP-230ENST00000462130 CARMIL2Q6F5E8 1435 aa17.42■□□□□ 0.38
HDLBP-230ENST00000462130 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
HDLBP-230ENST00000462130 TNIKQ9UKE5 1360 aa17.38■□□□□ 0.37
HDLBP-230ENST00000462130 KDM6BO15054 1643 aa17.37■□□□□ 0.37
HDLBP-230ENST00000462130 ABCC2Q92887 1545 aa17.33■□□□□ 0.37
HDLBP-230ENST00000462130 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
HDLBP-230ENST00000462130 DISP1Q96F81 1524 aa17.29■□□□□ 0.36
HDLBP-230ENST00000462130 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
HDLBP-230ENST00000462130 PLB1Q6P1J6 1458 aa17.28■□□□□ 0.36
HDLBP-230ENST00000462130 ASXL2Q76L83 1435 aa17.28■□□□□ 0.36
HDLBP-230ENST00000462130 UHRF1BP1LA0JNW5 1464 aa17.27■□□□□ 0.36
HDLBP-230ENST00000462130 UGGT2Q9NYU1 1516 aa17.26■□□□□ 0.35
HDLBP-230ENST00000462130 CTTNBP2Q8WZ74 1663 aa17.25■□□□□ 0.35
HDLBP-230ENST00000462130 GLI2P10070 1586 aa17.24■□□□□ 0.35
HDLBP-230ENST00000462130 KIAA0556O60303 1618 aa17.24■□□□□ 0.35
HDLBP-230ENST00000462130 PPRC1Q5VV67 1664 aaKnown RBP17.22■□□□□ 0.35
HDLBP-230ENST00000462130 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
HDLBP-230ENST00000462130 KDM5BQ9UGL1 1544 aa17.21■□□□□ 0.34
HDLBP-230ENST00000462130 EPRSP07814 1512 aaKnown RBP17.17■□□□□ 0.34
HDLBP-230ENST00000462130 KDM4FA0A1W2PPD8 638 aa17.16■□□□□ 0.34
HDLBP-230ENST00000462130 MAP3K4Q9Y6R4 1608 aa17.16■□□□□ 0.34
HDLBP-230ENST00000462130 GOLGA3Q08378 1498 aa17.14■□□□□ 0.33
HDLBP-230ENST00000462130 TEX14Q8IWB6 1497 aa17.13■□□□□ 0.33
HDLBP-230ENST00000462130 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
HDLBP-230ENST00000462130 WDR7Q9Y4E6 1490 aa17.1■□□□□ 0.33
HDLBP-230ENST00000462130 PRXQ9BXM0 1461 aa17.08■□□□□ 0.32
HDLBP-230ENST00000462130 ABCA8O94911 1581 aa17.07■□□□□ 0.32
HDLBP-230ENST00000462130 COL17A1Q9UMD9 1497 aaPredicted RBP17.07■□□□□ 0.32
HDLBP-230ENST00000462130 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
HDLBP-230ENST00000462130 KCNH8Q96L42 1107 aa17.06■□□□□ 0.32
HDLBP-230ENST00000462130 CFAP43Q8NDM7 1665 aa17.06■□□□□ 0.32
HDLBP-230ENST00000462130 ADGRL1O94910 1474 aa17.04■□□□□ 0.32
HDLBP-230ENST00000462130 CD109Q6YHK3 1445 aa17.02■□□□□ 0.31
HDLBP-230ENST00000462130 P3H3Q8IVL6 736 aa17.01■□□□□ 0.31
HDLBP-230ENST00000462130 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
HDLBP-230ENST00000462130 ARID3CA6NKF2 412 aa16.97■□□□□ 0.31
HDLBP-230ENST00000462130 CSRNP3Q8WYN3 585 aa16.97■□□□□ 0.31
HDLBP-230ENST00000462130 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
HDLBP-230ENST00000462130 SAMD9Q5K651 1589 aa16.93■□□□□ 0.3
HDLBP-230ENST00000462130 ATP10BO94823 1461 aa16.93■□□□□ 0.3
HDLBP-230ENST00000462130 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
HDLBP-230ENST00000462130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
HDLBP-230ENST00000462130 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
HDLBP-230ENST00000462130 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
HDLBP-230ENST00000462130 RAPGEF6Q8TEU7 1601 aa16.91■□□□□ 0.3
HDLBP-230ENST00000462130 RANGAP1P46060 587 aaPredicted RBP16.89■□□□□ 0.29
HDLBP-230ENST00000462130 ABCA9Q8IUA7 1624 aa16.88■□□□□ 0.29
HDLBP-230ENST00000462130 EEA1Q15075 1411 aa16.87■□□□□ 0.29
HDLBP-230ENST00000462130 KIF21BO75037 1637 aa16.87■□□□□ 0.29
HDLBP-230ENST00000462130 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
HDLBP-230ENST00000462130 HECW2Q9P2P5 1572 aa16.84■□□□□ 0.29
HDLBP-230ENST00000462130 PHLDB1Q86UU1 1377 aa16.83■□□□□ 0.28
HDLBP-230ENST00000462130 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
HDLBP-230ENST00000462130 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
HDLBP-230ENST00000462130 NUP153P49790 1475 aaKnown RBP16.8■□□□□ 0.28
HDLBP-230ENST00000462130 NEO1Q92859 1461 aa16.79■□□□□ 0.28
HDLBP-230ENST00000462130 RAPGEF3O95398 923 aa16.78■□□□□ 0.28
HDLBP-230ENST00000462130 PLEKHD1A6NEE1 506 aa16.77■□□□□ 0.28
HDLBP-230ENST00000462130 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
HDLBP-230ENST00000462130 ILDR1Q86SU0 546 aaPredicted RBP16.75■□□□□ 0.27
HDLBP-230ENST00000462130 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.27
HDLBP-230ENST00000462130 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
HDLBP-230ENST00000462130 FRMPD1Q5SYB0 1578 aa16.71■□□□□ 0.27
HDLBP-230ENST00000462130 CFAP74Q9C0B2 1584 aa16.71■□□□□ 0.27
HDLBP-230ENST00000462130 ADAMTSL3P82987 1691 aa16.71■□□□□ 0.27
HDLBP-230ENST00000462130 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
HDLBP-230ENST00000462130 BCORL1Q5H9F3 1711 aa16.69■□□□□ 0.26
HDLBP-230ENST00000462130 DENND4BO75064 1496 aaPredicted RBP16.68■□□□□ 0.26
HDLBP-230ENST00000462130 RICTORQ6R327 1708 aa16.68■□□□□ 0.26
HDLBP-230ENST00000462130 UBTFP17480 764 aaKnown RBP16.68■□□□□ 0.26
HDLBP-230ENST00000462130 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■■□ 21.9
HDLBP-230ENST00000462130 AKNAQ7Z591 1439 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms