RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
TRAF3IP1-204ENST00000462122 RIMBP3CA6NJZ7 1639 aa19.33■□□□□ 0.68
TRAF3IP1-204ENST00000462122 RIMBP3BA6NNM3 1639 aa19.33■□□□□ 0.68
TRAF3IP1-204ENST00000462122 RIMBP3Q9UFD9 1639 aa19.33■□□□□ 0.68
TRAF3IP1-204ENST00000462122 SHROOM2Q13796 1616 aa19.32■□□□□ 0.68
TRAF3IP1-204ENST00000462122 JPH4Q96JJ6 628 aa19.28■□□□□ 0.68
TRAF3IP1-204ENST00000462122 KIF21BO75037 1637 aa19.27■□□□□ 0.68
TRAF3IP1-204ENST00000462122 IQGAP2Q13576 1575 aa19.27■□□□□ 0.67
TRAF3IP1-204ENST00000462122 PRG4Q92954 1404 aaPredicted RBP19.24■□□□□ 0.67
TRAF3IP1-204ENST00000462122 CTTNBP2Q8WZ74 1663 aa19.22■□□□□ 0.67
TRAF3IP1-204ENST00000462122 ARAP1Q96P48 1450 aa19.22■□□□□ 0.67
TRAF3IP1-204ENST00000462122 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
TRAF3IP1-204ENST00000462122 GOLGA3Q08378 1498 aa19.18■□□□□ 0.66
TRAF3IP1-204ENST00000462122 UGGT2Q9NYU1 1516 aa19.18■□□□□ 0.66
TRAF3IP1-204ENST00000462122 CARMIL2Q6F5E8 1435 aa19.17■□□□□ 0.66
TRAF3IP1-204ENST00000462122 CYB5RLQ6IPT4 315 aa19.15■□□□□ 0.66
TRAF3IP1-204ENST00000462122 DISP1Q96F81 1524 aa19.1■□□□□ 0.65
TRAF3IP1-204ENST00000462122 KIAA0556O60303 1618 aa19.08■□□□□ 0.65
TRAF3IP1-204ENST00000462122 UBTFP17480 764 aaKnown RBP19.08■□□□□ 0.64
TRAF3IP1-204ENST00000462122 TNIKQ9UKE5 1360 aa19.07■□□□□ 0.64
TRAF3IP1-204ENST00000462122 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
TRAF3IP1-204ENST00000462122 PTPRGP23470 1445 aa19.04■□□□□ 0.64
TRAF3IP1-204ENST00000462122 SAMD9Q5K651 1589 aa19.01■□□□□ 0.63
TRAF3IP1-204ENST00000462122 EFCAB5A4FU69 1503 aa18.99■□□□□ 0.63
TRAF3IP1-204ENST00000462122 TTBK1Q5TCY1 1321 aaPredicted RBP18.95■□□□□ 0.62
TRAF3IP1-204ENST00000462122 RANGAP1P46060 587 aaPredicted RBP18.94■□□□□ 0.62
TRAF3IP1-204ENST00000462122 UACAQ9BZF9 1416 aa18.92■□□□□ 0.62
TRAF3IP1-204ENST00000462122 UHRF1BP1LA0JNW5 1464 aa18.91■□□□□ 0.62
TRAF3IP1-204ENST00000462122 P3H3Q8IVL6 736 aa18.91■□□□□ 0.62
TRAF3IP1-204ENST00000462122 ADCY10Q96PN6 1610 aa18.91■□□□□ 0.62
TRAF3IP1-204ENST00000462122 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
TRAF3IP1-204ENST00000462122 ABCC2Q92887 1545 aa18.9■□□□□ 0.62
TRAF3IP1-204ENST00000462122 FHOD3Q2V2M9 1422 aa18.89■□□□□ 0.61
TRAF3IP1-204ENST00000462122 ARHGAP35Q9NRY4 1499 aa18.88■□□□□ 0.61
TRAF3IP1-204ENST00000462122 NPM1P06748 294 aaKnown RBP eCLIP18.87■□□□□ 0.61
TRAF3IP1-204ENST00000462122 PLB1Q6P1J6 1458 aa18.86■□□□□ 0.61
TRAF3IP1-204ENST00000462122 ABCA8O94911 1581 aa18.85■□□□□ 0.61
TRAF3IP1-204ENST00000462122 CLIP1P30622 1438 aa18.83■□□□□ 0.61
TRAF3IP1-204ENST00000462122 KDM5BQ9UGL1 1544 aa18.81■□□□□ 0.6
TRAF3IP1-204ENST00000462122 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
TRAF3IP1-204ENST00000462122 FMN1Q68DA7 1419 aa18.81■□□□□ 0.6
TRAF3IP1-204ENST00000462122 MAPKBP1O60336 1514 aa18.8■□□□□ 0.6
TRAF3IP1-204ENST00000462122 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
TRAF3IP1-204ENST00000462122 CEP162Q5TB80 1403 aa18.77■□□□□ 0.6
TRAF3IP1-204ENST00000462122 ZCCHC11Q5TAX3 1644 aaKnown RBP18.74■□□□□ 0.59
TRAF3IP1-204ENST00000462122 NUP153P49790 1475 aaKnown RBP18.72■□□□□ 0.59
TRAF3IP1-204ENST00000462122 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
TRAF3IP1-204ENST00000462122 ASXL2Q76L83 1435 aa18.71■□□□□ 0.59
TRAF3IP1-204ENST00000462122 ATP10BO94823 1461 aa18.7■□□□□ 0.58
TRAF3IP1-204ENST00000462122 HECW1Q76N89 1606 aa18.69■□□□□ 0.58
TRAF3IP1-204ENST00000462122 ABCC10Q5T3U5 1492 aa18.69■□□□□ 0.58
TRAF3IP1-204ENST00000462122 PHF23Q9BUL5 403 aaPredicted RBP18.67■□□□□ 0.58
TRAF3IP1-204ENST00000462122 CASKIN1Q8WXD9 1431 aa18.66■□□□□ 0.58
TRAF3IP1-204ENST00000462122 WDR7Q9Y4E6 1490 aa18.66■□□□□ 0.58
TRAF3IP1-204ENST00000462122 DIP2BQ9P265 1576 aa18.65■□□□□ 0.58
TRAF3IP1-204ENST00000462122 ARID3CA6NKF2 412 aa18.64■□□□□ 0.57
TRAF3IP1-204ENST00000462122 FYCO1Q9BQS8 1478 aa18.64■□□□□ 0.57
TRAF3IP1-204ENST00000462122 PCF11O94913 1555 aaKnown RBP18.64■□□□□ 0.57
TRAF3IP1-204ENST00000462122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
TRAF3IP1-204ENST00000462122 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
TRAF3IP1-204ENST00000462122 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
TRAF3IP1-204ENST00000462122 EPRSP07814 1512 aaKnown RBP18.62■□□□□ 0.57
TRAF3IP1-204ENST00000462122 FAM69CQ0P6D2 419 aa18.61■□□□□ 0.57
TRAF3IP1-204ENST00000462122 KIF13AQ9H1H9 1805 aa18.6■□□□□ 0.57
TRAF3IP1-204ENST00000462122 GLI2P10070 1586 aa18.59■□□□□ 0.57
TRAF3IP1-204ENST00000462122 CCDC18Q5T9S5 1454 aa18.59■□□□□ 0.57
TRAF3IP1-204ENST00000462122 CDK13Q14004 1512 aaKnown RBP18.59■□□□□ 0.57
TRAF3IP1-204ENST00000462122 PLEKHD1A6NEE1 506 aa18.57■□□□□ 0.56
TRAF3IP1-204ENST00000462122 CDK11AQ9UQ88 783 aaPredicted RBP18.56■□□□□ 0.56
TRAF3IP1-204ENST00000462122 VPS8Q8N3P4 1428 aa18.56■□□□□ 0.56
TRAF3IP1-204ENST00000462122 KCNH8Q96L42 1107 aa18.52■□□□□ 0.56
TRAF3IP1-204ENST00000462122 LRRIQ1Q96JM4 1722 aa18.52■□□□□ 0.55
TRAF3IP1-204ENST00000462122 MAP3K4Q9Y6R4 1608 aa18.49■□□□□ 0.55
TRAF3IP1-204ENST00000462122 CFAP43Q8NDM7 1665 aa18.48■□□□□ 0.55
TRAF3IP1-204ENST00000462122 TROQ12816 1431 aaPredicted RBP18.48■□□□□ 0.55
TRAF3IP1-204ENST00000462122 ABCA9Q8IUA7 1624 aa18.46■□□□□ 0.55
TRAF3IP1-204ENST00000462122 CD109Q6YHK3 1445 aa18.46■□□□□ 0.55
TRAF3IP1-204ENST00000462122 TEX14Q8IWB6 1497 aa18.44■□□□□ 0.54
TRAF3IP1-204ENST00000462122 MAGI3Q5TCQ9 1506 aa18.44■□□□□ 0.54
TRAF3IP1-204ENST00000462122 KIF14Q15058 1648 aa18.43■□□□□ 0.54
TRAF3IP1-204ENST00000462122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.41■□□□□ 0.54
TRAF3IP1-204ENST00000462122 TSPOAP1O95153 1857 aa18.41■□□□□ 0.54
TRAF3IP1-204ENST00000462122 PPRC1Q5VV67 1664 aaKnown RBP18.41■□□□□ 0.54
TRAF3IP1-204ENST00000462122 MAP3K1Q13233 1512 aa18.39■□□□□ 0.54
TRAF3IP1-204ENST00000462122 TIAM1Q13009 1591 aa18.39■□□□□ 0.53
TRAF3IP1-204ENST00000462122 MTUS2Q5JR59 1369 aa18.39■□□□□ 0.53
TRAF3IP1-204ENST00000462122 TTC37Q6PGP7 1564 aa18.38■□□□□ 0.53
TRAF3IP1-204ENST00000462122 EHBP1L1Q8N3D4 1523 aa18.38■□□□□ 0.53
TRAF3IP1-204ENST00000462122 APLP2Q06481 763 aa18.34■□□□□ 0.53
TRAF3IP1-204ENST00000462122 PLCH2O75038 1416 aa18.33■□□□□ 0.53
TRAF3IP1-204ENST00000462122 PHLDB1Q86UU1 1377 aa18.33■□□□□ 0.53
TRAF3IP1-204ENST00000462122 ARAP3Q8WWN8 1544 aa18.33■□□□□ 0.52
TRAF3IP1-204ENST00000462122 NEO1Q92859 1461 aa18.33■□□□□ 0.52
TRAF3IP1-204ENST00000462122 LRRC9Q6ZRR7 1453 aa18.32■□□□□ 0.52
TRAF3IP1-204ENST00000462122 KDM6BO15054 1643 aa18.31■□□□□ 0.52
TRAF3IP1-204ENST00000462122 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
TRAF3IP1-204ENST00000462122 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
TRAF3IP1-204ENST00000462122 FANCAO15360 1455 aa18.29■□□□□ 0.52
TRAF3IP1-204ENST00000462122 SUPT6HQ7KZ85 1726 aaKnown RBP18.26■□□□□ 0.51
TRAF3IP1-204ENST00000462122 EFCAB2Q5VUJ9 269 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms