RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 NISCHQ9Y2I1 1504 aa28.01■■■□□ 2.07
TRAF3IP1-204ENST00000462122 CCDC180Q9P1Z9 1646 aa24.84■■□□□ 1.57
TRAF3IP1-204ENST00000462122 ABCC9O60706 1549 aa24.1■■□□□ 1.45
TRAF3IP1-204ENST00000462122 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
TRAF3IP1-204ENST00000462122 NACADO15069 1562 aa23.32■■□□□ 1.32
TRAF3IP1-204ENST00000462122 RB1CC1Q8TDY2 1594 aa23.3■■□□□ 1.32
TRAF3IP1-204ENST00000462122 DCAF8L2P0C7V8 631 aa23.28■■□□□ 1.32
TRAF3IP1-204ENST00000462122 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
TRAF3IP1-204ENST00000462122 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
TRAF3IP1-204ENST00000462122 UNC13AQ9UPW8 1703 aa22.69■■□□□ 1.22
TRAF3IP1-204ENST00000462122 SCRIBQ14160 1630 aa22.64■■□□□ 1.22
TRAF3IP1-204ENST00000462122 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
TRAF3IP1-204ENST00000462122 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.2
TRAF3IP1-204ENST00000462122 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
TRAF3IP1-204ENST00000462122 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
TRAF3IP1-204ENST00000462122 EIF4G1Q04637 1599 aaKnown RBP21.97■■□□□ 1.11
TRAF3IP1-204ENST00000462122 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
TRAF3IP1-204ENST00000462122 CC2D2AQ9P2K1 1620 aa21.81■■□□□ 1.08
TRAF3IP1-204ENST00000462122 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
TRAF3IP1-204ENST00000462122 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
TRAF3IP1-204ENST00000462122 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
TRAF3IP1-204ENST00000462122 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
TRAF3IP1-204ENST00000462122 SMARCA2P51531 1590 aa21.55■■□□□ 1.04
TRAF3IP1-204ENST00000462122 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
TRAF3IP1-204ENST00000462122 NCAPD3P42695 1498 aa21.52■■□□□ 1.03
TRAF3IP1-204ENST00000462122 PEG3Q9GZU2 1588 aa21.51■■□□□ 1.03
TRAF3IP1-204ENST00000462122 HMGXB3Q12766 1538 aa21.45■■□□□ 1.02
TRAF3IP1-204ENST00000462122 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
TRAF3IP1-204ENST00000462122 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.01
TRAF3IP1-204ENST00000462122 WIZO95785 1651 aa21.32■■□□□ 1
TRAF3IP1-204ENST00000462122 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
TRAF3IP1-204ENST00000462122 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
TRAF3IP1-204ENST00000462122 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
TRAF3IP1-204ENST00000462122 NESP48681 1621 aa20.89■□□□□ 0.94
TRAF3IP1-204ENST00000462122 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.93
TRAF3IP1-204ENST00000462122 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
TRAF3IP1-204ENST00000462122 CFTRP13569 1480 aa20.81■□□□□ 0.92
TRAF3IP1-204ENST00000462122 ERCC6Q03468 1493 aa20.8■□□□□ 0.92
TRAF3IP1-204ENST00000462122 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
TRAF3IP1-204ENST00000462122 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
TRAF3IP1-204ENST00000462122 KIF21AQ7Z4S6 1674 aa20.65■□□□□ 0.9
TRAF3IP1-204ENST00000462122 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
TRAF3IP1-204ENST00000462122 PRDM2Q13029 1718 aa20.63■□□□□ 0.89
TRAF3IP1-204ENST00000462122 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
TRAF3IP1-204ENST00000462122 THOC2Q8NI27 1593 aaKnown RBP20.57■□□□□ 0.88
TRAF3IP1-204ENST00000462122 MRC2Q9UBG0 1479 aa20.56■□□□□ 0.88
TRAF3IP1-204ENST00000462122 CUX2O14529 1486 aa20.54■□□□□ 0.88
TRAF3IP1-204ENST00000462122 WDR62O43379 1518 aa20.48■□□□□ 0.87
TRAF3IP1-204ENST00000462122 URB2Q14146 1524 aaKnown RBP20.41■□□□□ 0.86
TRAF3IP1-204ENST00000462122 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
TRAF3IP1-204ENST00000462122 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
TRAF3IP1-204ENST00000462122 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
TRAF3IP1-204ENST00000462122 CUX1P39880 1505 aa20.22■□□□□ 0.83
TRAF3IP1-204ENST00000462122 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
TRAF3IP1-204ENST00000462122 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
TRAF3IP1-204ENST00000462122 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
TRAF3IP1-204ENST00000462122 FGD5Q6ZNL6 1462 aa20.14■□□□□ 0.81
TRAF3IP1-204ENST00000462122 TOP2BQ02880 1626 aa20.12■□□□□ 0.81
TRAF3IP1-204ENST00000462122 BIVM-ERCC5R4GMW8 1640 aa20.11■□□□□ 0.81
TRAF3IP1-204ENST00000462122 SYNJ1O43426 1573 aa20.1■□□□□ 0.81
TRAF3IP1-204ENST00000462122 SOGA1O94964 1423 aa20.09■□□□□ 0.81
TRAF3IP1-204ENST00000462122 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
TRAF3IP1-204ENST00000462122 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
TRAF3IP1-204ENST00000462122 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
TRAF3IP1-204ENST00000462122 WDR97A6NE52 1622 aa20■□□□□ 0.79
TRAF3IP1-204ENST00000462122 EIF4G3O43432 1585 aaKnown RBP19.99■□□□□ 0.79
TRAF3IP1-204ENST00000462122 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
TRAF3IP1-204ENST00000462122 AQRO60306 1485 aaKnown RBP eCLIP19.94■□□□□ 0.78
TRAF3IP1-204ENST00000462122 TDRD9Q8NDG6 1382 aaKnown RBP19.94■□□□□ 0.78
TRAF3IP1-204ENST00000462122 ABCA5Q8WWZ7 1642 aa19.87■□□□□ 0.77
TRAF3IP1-204ENST00000462122 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
TRAF3IP1-204ENST00000462122 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
TRAF3IP1-204ENST00000462122 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
TRAF3IP1-204ENST00000462122 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
TRAF3IP1-204ENST00000462122 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
TRAF3IP1-204ENST00000462122 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
TRAF3IP1-204ENST00000462122 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
TRAF3IP1-204ENST00000462122 ERICH3Q5RHP9 1530 aa19.75■□□□□ 0.75
TRAF3IP1-204ENST00000462122 SYNJ2O15056 1496 aa19.71■□□□□ 0.75
TRAF3IP1-204ENST00000462122 OSCARQ8IYS5 282 aa19.69■□□□□ 0.74
TRAF3IP1-204ENST00000462122 ADAMTS12P58397 1594 aa19.67■□□□□ 0.74
TRAF3IP1-204ENST00000462122 FBLN2P98095 1184 aa19.67■□□□□ 0.74
TRAF3IP1-204ENST00000462122 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
TRAF3IP1-204ENST00000462122 CHD1O14646 1710 aa19.66■□□□□ 0.74
TRAF3IP1-204ENST00000462122 DNAJC5Q9H3Z4 198 aa19.66■□□□□ 0.74
TRAF3IP1-204ENST00000462122 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
TRAF3IP1-204ENST00000462122 IGF1RP08069 1367 aa19.63■□□□□ 0.73
TRAF3IP1-204ENST00000462122 CUL7Q14999 1698 aa19.6■□□□□ 0.73
TRAF3IP1-204ENST00000462122 GRIN2AQ12879 1464 aa19.59■□□□□ 0.73
TRAF3IP1-204ENST00000462122 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
TRAF3IP1-204ENST00000462122 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
TRAF3IP1-204ENST00000462122 EEA1Q15075 1411 aa19.52■□□□□ 0.72
TRAF3IP1-204ENST00000462122 NUP160Q12769 1436 aa19.51■□□□□ 0.71
TRAF3IP1-204ENST00000462122 CLASP1Q7Z460 1538 aa19.5■□□□□ 0.71
TRAF3IP1-204ENST00000462122 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
TRAF3IP1-204ENST00000462122 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
TRAF3IP1-204ENST00000462122 CSRNP3Q8WYN3 585 aa19.42■□□□□ 0.7
TRAF3IP1-204ENST00000462122 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
TRAF3IP1-204ENST00000462122 ARHGEF11O15085 1522 aa19.36■□□□□ 0.69
TRAF3IP1-204ENST00000462122 KIAA0586Q9BVV6 1533 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms