RNA–Protein interactions for RNA: ENST00000461945.1

CARMIL1-202, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

TSL 1 (best) BASIC

Gene CARMIL1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-202ENST00000461945 RAPGEF2Q9Y4G8 1499 aa39.81■■■■□ 3.96
CARMIL1-202ENST00000461945 SHROOM2Q13796 1616 aa39.8■■■■□ 3.96
CARMIL1-202ENST00000461945 JPH4Q96JJ6 628 aa39.79■■■■□ 3.96
CARMIL1-202ENST00000461945 KIAA0586Q9BVV6 1533 aa39.77■■■■□ 3.96
CARMIL1-202ENST00000461945 ERCC6L2Q5T890 1561 aa39.75■■■■□ 3.95
CARMIL1-202ENST00000461945 PRG4Q92954 1404 aaPredicted RBP39.7■■■■□ 3.95
CARMIL1-202ENST00000461945 EEA1Q15075 1411 aa39.66■■■■□ 3.94
CARMIL1-202ENST00000461945 CSRNP3Q8WYN3 585 aa39.66■■■■□ 3.94
CARMIL1-202ENST00000461945 PRXQ9BXM0 1461 aa39.65■■■■□ 3.94
CARMIL1-202ENST00000461945 FAM9AQ8IZU1 332 aaPredicted RBP39.59■■■■□ 3.93
CARMIL1-202ENST00000461945 IQGAP2Q13576 1575 aa39.54■■■■□ 3.92
CARMIL1-202ENST00000461945 CTTNBP2Q8WZ74 1663 aa39.38■■■■□ 3.89
CARMIL1-202ENST00000461945 CARMIL2Q6F5E8 1435 aa39.37■■■■□ 3.89
CARMIL1-202ENST00000461945 UGGT2Q9NYU1 1516 aa39.32■■■■□ 3.89
CARMIL1-202ENST00000461945 DISP1Q96F81 1524 aa39.27■■■■□ 3.88
CARMIL1-202ENST00000461945 TNIKQ9UKE5 1360 aa39.25■■■■□ 3.87
CARMIL1-202ENST00000461945 TTBK1Q5TCY1 1321 aaPredicted RBP39.24■■■■□ 3.87
CARMIL1-202ENST00000461945 KIF21BO75037 1637 aa39.23■■■■□ 3.87
CARMIL1-202ENST00000461945 PTPRGP23470 1445 aa39.23■■■■□ 3.87
CARMIL1-202ENST00000461945 KIAA0556O60303 1618 aa39.17■■■■□ 3.86
CARMIL1-202ENST00000461945 GOLGA3Q08378 1498 aa39.12■■■■□ 3.85
CARMIL1-202ENST00000461945 TRHP20396 242 aaPredicted RBP39.1■■■■□ 3.85
CARMIL1-202ENST00000461945 EHMT2Q96KQ7 1210 aa39.1■■■■□ 3.85
CARMIL1-202ENST00000461945 ADCY10Q96PN6 1610 aa39.06■■■■□ 3.84
CARMIL1-202ENST00000461945 NPM1P06748 294 aaKnown RBP eCLIP39.02■■■■□ 3.84
CARMIL1-202ENST00000461945 UBTFP17480 764 aaKnown RBP39■■■■□ 3.83
CARMIL1-202ENST00000461945 RANGAP1P46060 587 aaPredicted RBP38.97■■■■□ 3.83
CARMIL1-202ENST00000461945 UACAQ9BZF9 1416 aa38.96■■■■□ 3.83
CARMIL1-202ENST00000461945 P3H3Q8IVL6 736 aa38.95■■■■□ 3.83
CARMIL1-202ENST00000461945 UHRF1BP1LA0JNW5 1464 aa38.89■■■■□ 3.82
CARMIL1-202ENST00000461945 SAMD9Q5K651 1589 aa38.88■■■■□ 3.81
CARMIL1-202ENST00000461945 ABCC2Q92887 1545 aa38.86■■■■□ 3.81
CARMIL1-202ENST00000461945 PLB1Q6P1J6 1458 aa38.81■■■■□ 3.8
CARMIL1-202ENST00000461945 MAPKBP1O60336 1514 aa38.8■■■■□ 3.8
CARMIL1-202ENST00000461945 ABCA8O94911 1581 aa38.74■■■■□ 3.79
CARMIL1-202ENST00000461945 EFCAB5A4FU69 1503 aa38.73■■■■□ 3.79
CARMIL1-202ENST00000461945 FHOD3Q2V2M9 1422 aa38.72■■■■□ 3.79
CARMIL1-202ENST00000461945 KDM5BQ9UGL1 1544 aa38.7■■■■□ 3.79
CARMIL1-202ENST00000461945 ABCC10Q5T3U5 1492 aa38.65■■■■□ 3.78
CARMIL1-202ENST00000461945 ZCCHC11Q5TAX3 1644 aaKnown RBP38.63■■■■□ 3.77
CARMIL1-202ENST00000461945 FAM69CQ0P6D2 419 aa38.62■■■■□ 3.77
CARMIL1-202ENST00000461945 ASXL2Q76L83 1435 aa38.62■■■■□ 3.77
CARMIL1-202ENST00000461945 KIF13AQ9H1H9 1805 aa38.59■■■■□ 3.77
CARMIL1-202ENST00000461945 DIP2BQ9P265 1576 aa38.57■■■■□ 3.76
CARMIL1-202ENST00000461945 ARHGAP35Q9NRY4 1499 aa38.56■■■■□ 3.76
CARMIL1-202ENST00000461945 RAPGEF6Q8TEU7 1601 aa38.54■■■■□ 3.76
CARMIL1-202ENST00000461945 ARID3CA6NKF2 412 aa38.53■■■■□ 3.76
CARMIL1-202ENST00000461945 ATP10BO94823 1461 aa38.45■■■■□ 3.75
CARMIL1-202ENST00000461945 WDR7Q9Y4E6 1490 aa38.41■■■■□ 3.74
CARMIL1-202ENST00000461945 NUP153P49790 1475 aaKnown RBP38.41■■■■□ 3.74
CARMIL1-202ENST00000461945 FMN1Q68DA7 1419 aa38.39■■■■□ 3.74
CARMIL1-202ENST00000461945 EPRSP07814 1512 aaKnown RBP38.38■■■■□ 3.74
CARMIL1-202ENST00000461945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.36■■■■□ 3.73
CARMIL1-202ENST00000461945 HNRNPUL2Q1KMD3 747 aaKnown RBP38.36■■■■□ 3.73
CARMIL1-202ENST00000461945 GLI2P10070 1586 aa38.36■■■■□ 3.73
CARMIL1-202ENST00000461945 CLIP1P30622 1438 aa38.35■■■■□ 3.73
CARMIL1-202ENST00000461945 LOC105371045A0A1W2PR82 267 aa38.3■■■■□ 3.72
CARMIL1-202ENST00000461945 KCNH8Q96L42 1107 aa38.3■■■■□ 3.72
CARMIL1-202ENST00000461945 ATP1B4Q9UN42 357 aaPredicted RBP38.27■■■■□ 3.72
CARMIL1-202ENST00000461945 TSPOAP1O95153 1857 aa38.26■■■■□ 3.72
CARMIL1-202ENST00000461945 HECW1Q76N89 1606 aa38.2■■■■□ 3.7
CARMIL1-202ENST00000461945 SENP3Q9H4L4 574 aaPredicted RBP38.18■■■■□ 3.7
CARMIL1-202ENST00000461945 MAP3K4Q9Y6R4 1608 aa38.17■■■■□ 3.7
CARMIL1-202ENST00000461945 CEP162Q5TB80 1403 aa38.17■■■■□ 3.7
CARMIL1-202ENST00000461945 PLEKHD1A6NEE1 506 aa38.15■■■■□ 3.7
CARMIL1-202ENST00000461945 CDK13Q14004 1512 aaKnown RBP38.15■■■■□ 3.7
CARMIL1-202ENST00000461945 PPRC1Q5VV67 1664 aaKnown RBP38.11■■■■□ 3.69
CARMIL1-202ENST00000461945 CASKIN1Q8WXD9 1431 aa38.09■■■■□ 3.69
CARMIL1-202ENST00000461945 PCF11O94913 1555 aaKnown RBP38.08■■■■□ 3.69
CARMIL1-202ENST00000461945 CD109Q6YHK3 1445 aa38.08■■■■□ 3.69
CARMIL1-202ENST00000461945 CFAP43Q8NDM7 1665 aa38.06■■■■□ 3.68
CARMIL1-202ENST00000461945 TEX14Q8IWB6 1497 aa38.03■■■■□ 3.68
CARMIL1-202ENST00000461945 ABCA9Q8IUA7 1624 aa37.98■■■■□ 3.67
CARMIL1-202ENST00000461945 MAGI3Q5TCQ9 1506 aa37.98■■■■□ 3.67
CARMIL1-202ENST00000461945 FYCO1Q9BQS8 1478 aa37.98■■■■□ 3.67
CARMIL1-202ENST00000461945 CDK11AQ9UQ88 783 aaPredicted RBP37.98■■■■□ 3.67
CARMIL1-202ENST00000461945 KDM6BO15054 1643 aa37.98■■■■□ 3.67
CARMIL1-202ENST00000461945 LRRIQ1Q96JM4 1722 aa37.96■■■■□ 3.67
CARMIL1-202ENST00000461945 CCDC18Q5T9S5 1454 aa37.94■■■■□ 3.66
CARMIL1-202ENST00000461945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.85■■■■□ 3.65
CARMIL1-202ENST00000461945 TROQ12816 1431 aaPredicted RBP37.85■■■■□ 3.65
CARMIL1-202ENST00000461945 COL17A1Q9UMD9 1497 aaPredicted RBP37.8■■■■□ 3.64
CARMIL1-202ENST00000461945 TTC37Q6PGP7 1564 aa37.79■■■■□ 3.64
CARMIL1-202ENST00000461945 PHF23Q9BUL5 403 aaPredicted RBP37.75■■■■□ 3.63
CARMIL1-202ENST00000461945 KIF14Q15058 1648 aa37.74■■■■□ 3.63
CARMIL1-202ENST00000461945 VPS8Q8N3P4 1428 aa37.7■■■■□ 3.63
CARMIL1-202ENST00000461945 PHLDB1Q86UU1 1377 aa37.69■■■■□ 3.62
CARMIL1-202ENST00000461945 NEO1Q92859 1461 aa37.69■■■■□ 3.62
CARMIL1-202ENST00000461945 PLCH2O75038 1416 aa37.64■■■■□ 3.62
CARMIL1-202ENST00000461945 ARAP3Q8WWN8 1544 aa37.64■■■■□ 3.62
CARMIL1-202ENST00000461945 FANCAO15360 1455 aa37.64■■■■□ 3.62
CARMIL1-202ENST00000461945 MTUS2Q5JR59 1369 aa37.59■■■■□ 3.61
CARMIL1-202ENST00000461945 MYO5CQ9NQX4 1742 aa37.58■■■■□ 3.61
CARMIL1-202ENST00000461945 AKNAQ7Z591 1439 aa37.58■■■■□ 3.61
CARMIL1-202ENST00000461945 CFAP74Q9C0B2 1584 aa37.58■■■■□ 3.61
CARMIL1-202ENST00000461945 EFCAB2Q5VUJ9 269 aa37.52■■■■□ 3.6
CARMIL1-202ENST00000461945 RAPGEF3O95398 923 aa37.51■■■■□ 3.6
CARMIL1-202ENST00000461945 ARHGAP5Q13017 1502 aa37.49■■■■□ 3.59
CARMIL1-202ENST00000461945 EHBP1L1Q8N3D4 1523 aa37.47■■■■□ 3.59
CARMIL1-202ENST00000461945 DENND4BO75064 1496 aaPredicted RBP37.46■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms