RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 FAM69CQ0P6D2 419 aa24.68■■□□□ 1.54
PABPC4-208ENST00000461578 RUSC2Q8N2Y8 1516 aa24.66■■□□□ 1.54
PABPC4-208ENST00000461578 NPM1P06748 294 aaKnown RBP eCLIP24.64■■□□□ 1.54
PABPC4-208ENST00000461578 ABCC10Q5T3U5 1492 aa24.64■■□□□ 1.53
PABPC4-208ENST00000461578 ADCY10Q96PN6 1610 aa24.58■■□□□ 1.53
PABPC4-208ENST00000461578 MAPKBP1O60336 1514 aa24.58■■□□□ 1.53
PABPC4-208ENST00000461578 DIP2BQ9P265 1576 aa24.58■■□□□ 1.52
PABPC4-208ENST00000461578 KDM6BO15054 1643 aa24.5■■□□□ 1.51
PABPC4-208ENST00000461578 TSPOAP1O95153 1857 aa24.49■■□□□ 1.51
PABPC4-208ENST00000461578 KIAA0586Q9BVV6 1533 aa24.46■■□□□ 1.51
PABPC4-208ENST00000461578 KDM4FA0A1W2PPD8 638 aa24.43■■□□□ 1.5
PABPC4-208ENST00000461578 TTBK1Q5TCY1 1321 aaPredicted RBP24.42■■□□□ 1.5
PABPC4-208ENST00000461578 IGF1RP08069 1367 aa24.42■■□□□ 1.5
PABPC4-208ENST00000461578 CUL7Q14999 1698 aa24.39■■□□□ 1.49
PABPC4-208ENST00000461578 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
PABPC4-208ENST00000461578 PTPRGP23470 1445 aa24.35■■□□□ 1.49
PABPC4-208ENST00000461578 ABCC2Q92887 1545 aa24.26■■□□□ 1.47
PABPC4-208ENST00000461578 CARMIL1Q5VZK9 1371 aa24.26■■□□□ 1.47
PABPC4-208ENST00000461578 TNIKQ9UKE5 1360 aa24.26■■□□□ 1.47
PABPC4-208ENST00000461578 CARMIL2Q6F5E8 1435 aa24.25■■□□□ 1.47
PABPC4-208ENST00000461578 ASXL2Q76L83 1435 aa24.25■■□□□ 1.47
PABPC4-208ENST00000461578 PPRC1Q5VV67 1664 aaKnown RBP24.23■■□□□ 1.47
PABPC4-208ENST00000461578 PLB1Q6P1J6 1458 aa24.2■■□□□ 1.47
PABPC4-208ENST00000461578 IQGAP2Q13576 1575 aa24.2■■□□□ 1.46
PABPC4-208ENST00000461578 GLI2P10070 1586 aa24.18■■□□□ 1.46
PABPC4-208ENST00000461578 ADGRL1O94910 1474 aa24.15■■□□□ 1.46
PABPC4-208ENST00000461578 ILDR1Q86SU0 546 aaPredicted RBP24.15■■□□□ 1.46
PABPC4-208ENST00000461578 UHRF1BP1LA0JNW5 1464 aa24.14■■□□□ 1.46
PABPC4-208ENST00000461578 UACAQ9BZF9 1416 aa24.14■■□□□ 1.45
PABPC4-208ENST00000461578 DISP1Q96F81 1524 aa24.11■■□□□ 1.45
PABPC4-208ENST00000461578 COL17A1Q9UMD9 1497 aaPredicted RBP24.1■■□□□ 1.45
PABPC4-208ENST00000461578 EPRSP07814 1512 aaKnown RBP24.09■■□□□ 1.45
PABPC4-208ENST00000461578 MAP3K4Q9Y6R4 1608 aa24.06■■□□□ 1.44
PABPC4-208ENST00000461578 KDM5BQ9UGL1 1544 aa24.05■■□□□ 1.44
PABPC4-208ENST00000461578 ZCCHC11Q5TAX3 1644 aaKnown RBP24.05■■□□□ 1.44
PABPC4-208ENST00000461578 TEX14Q8IWB6 1497 aa24.02■■□□□ 1.44
PABPC4-208ENST00000461578 UGGT2Q9NYU1 1516 aa24■■□□□ 1.43
PABPC4-208ENST00000461578 KIAA0556O60303 1618 aa23.99■■□□□ 1.43
PABPC4-208ENST00000461578 RAPGEF2Q9Y4G8 1499 aa23.98■■□□□ 1.43
PABPC4-208ENST00000461578 HECW2Q9P2P5 1572 aa23.96■■□□□ 1.43
PABPC4-208ENST00000461578 WDR7Q9Y4E6 1490 aa23.93■■□□□ 1.42
PABPC4-208ENST00000461578 KCNH8Q96L42 1107 aa23.86■■□□□ 1.41
PABPC4-208ENST00000461578 CD109Q6YHK3 1445 aa23.84■■□□□ 1.41
PABPC4-208ENST00000461578 CTTNBP2Q8WZ74 1663 aa23.83■■□□□ 1.41
PABPC4-208ENST00000461578 CFAP43Q8NDM7 1665 aa23.81■■□□□ 1.4
PABPC4-208ENST00000461578 MAGI3Q5TCQ9 1506 aa23.79■■□□□ 1.4
PABPC4-208ENST00000461578 ABCA8O94911 1581 aa23.78■■□□□ 1.4
PABPC4-208ENST00000461578 GOLGA3Q08378 1498 aa23.77■■□□□ 1.4
PABPC4-208ENST00000461578 KIF21BO75037 1637 aa23.75■■□□□ 1.39
PABPC4-208ENST00000461578 ARID3CA6NKF2 412 aa23.72■■□□□ 1.39
PABPC4-208ENST00000461578 P3H3Q8IVL6 736 aa23.64■■□□□ 1.37
PABPC4-208ENST00000461578 ARAP3Q8WWN8 1544 aa23.62■■□□□ 1.37
PABPC4-208ENST00000461578 PRXQ9BXM0 1461 aa23.61■■□□□ 1.37
PABPC4-208ENST00000461578 ATP10BO94823 1461 aa23.59■■□□□ 1.37
PABPC4-208ENST00000461578 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
PABPC4-208ENST00000461578 RAPGEF3O95398 923 aa23.55■■□□□ 1.36
PABPC4-208ENST00000461578 ABCA9Q8IUA7 1624 aa23.55■■□□□ 1.36
PABPC4-208ENST00000461578 PTPRMP28827 1452 aa23.54■■□□□ 1.36
PABPC4-208ENST00000461578 ADAMTSL3P82987 1691 aa23.54■■□□□ 1.36
PABPC4-208ENST00000461578 FBXO41Q8TF61 875 aa23.53■■□□□ 1.36
PABPC4-208ENST00000461578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.5■■□□□ 1.35
PABPC4-208ENST00000461578 HNRNPUL2Q1KMD3 747 aaKnown RBP23.5■■□□□ 1.35
PABPC4-208ENST00000461578 PHLDB1Q86UU1 1377 aa23.49■■□□□ 1.35
PABPC4-208ENST00000461578 ARID4BQ4LE39 1312 aaPredicted RBP23.48■■□□□ 1.35
PABPC4-208ENST00000461578 RAPGEF6Q8TEU7 1601 aa23.47■■□□□ 1.35
PABPC4-208ENST00000461578 BCORL1Q5H9F3 1711 aa23.45■■□□□ 1.34
PABPC4-208ENST00000461578 FRMPD1Q5SYB0 1578 aa23.45■■□□□ 1.34
PABPC4-208ENST00000461578 NEO1Q92859 1461 aa23.45■■□□□ 1.34
PABPC4-208ENST00000461578 MADDQ8WXG6 1647 aa23.44■■□□□ 1.34
PABPC4-208ENST00000461578 SAMD9Q5K651 1589 aa23.44■■□□□ 1.34
PABPC4-208ENST00000461578 RANGAP1P46060 587 aaPredicted RBP23.41■■□□□ 1.34
PABPC4-208ENST00000461578 PCF11O94913 1555 aaKnown RBP23.4■■□□□ 1.34
PABPC4-208ENST00000461578 NUP153P49790 1475 aaKnown RBP23.37■■□□□ 1.33
PABPC4-208ENST00000461578 RIMS1Q86UR5 1692 aaKnown RBP23.37■■□□□ 1.33
PABPC4-208ENST00000461578 LMTK3Q96Q04 1460 aa23.36■■□□□ 1.33
PABPC4-208ENST00000461578 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
PABPC4-208ENST00000461578 ARHGEF40Q8TER5 1519 aa23.34■■□□□ 1.33
PABPC4-208ENST00000461578 CSRNP3Q8WYN3 585 aa23.34■■□□□ 1.33
PABPC4-208ENST00000461578 FHOD3Q2V2M9 1422 aa23.33■■□□□ 1.32
PABPC4-208ENST00000461578 DENND4BO75064 1496 aaPredicted RBP23.32■■□□□ 1.32
PABPC4-208ENST00000461578 RICTORQ6R327 1708 aa23.31■■□□□ 1.32
PABPC4-208ENST00000461578 PLEKHD1A6NEE1 506 aa23.29■■□□□ 1.32
PABPC4-208ENST00000461578 HSPA2P54652 639 aa23.29■■□□□ 1.32
PABPC4-208ENST00000461578 AKNAQ7Z591 1439 aa23.29■■□□□ 1.32
PABPC4-208ENST00000461578 FANCAO15360 1455 aa23.27■■□□□ 1.32
PABPC4-208ENST00000461578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.25■■□□□ 1.31
PABPC4-208ENST00000461578 CFAP74Q9C0B2 1584 aa23.25■■□□□ 1.31
PABPC4-208ENST00000461578 SIGLEC1Q9BZZ2 1709 aa23.23■■□□□ 1.31
PABPC4-208ENST00000461578 TTC37Q6PGP7 1564 aa23.23■■□□□ 1.31
PABPC4-208ENST00000461578 POGZQ7Z3K3 1410 aa23.22■■□□□ 1.31
PABPC4-208ENST00000461578 YEATS2Q9ULM3 1422 aa23.22■■□□□ 1.31
PABPC4-208ENST00000461578 ZFYVE16Q7Z3T8 1539 aa23.22■■□□□ 1.31
PABPC4-208ENST00000461578 MLECQ14165 292 aa23.21■■□□□ 1.31
PABPC4-208ENST00000461578 ZMYM4Q5VZL5 1548 aa23.19■■□□□ 1.3
PABPC4-208ENST00000461578 EFCAB5A4FU69 1503 aa23.18■■□□□ 1.3
PABPC4-208ENST00000461578 HECW1Q76N89 1606 aa23.15■■□□□ 1.3
PABPC4-208ENST00000461578 FER1L4A9Z1Z3 1794 aa23.15■■□□□ 1.3
PABPC4-208ENST00000461578 CDK13Q14004 1512 aaKnown RBP23.14■■□□□ 1.3
PABPC4-208ENST00000461578 MAGI2Q86UL8 1455 aa23.11■■□□□ 1.29
PABPC4-208ENST00000461578 EEA1Q15075 1411 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms