RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
TRAPPC12-213ENST00000461577 JPH4Q96JJ6 628 aa17.74■□□□□ 0.43
TRAPPC12-213ENST00000461577 KIAA0586Q9BVV6 1533 aa17.73■□□□□ 0.43
TRAPPC12-213ENST00000461577 ERCC6L2Q5T890 1561 aa17.71■□□□□ 0.43
TRAPPC12-213ENST00000461577 EEA1Q15075 1411 aa17.7■□□□□ 0.42
TRAPPC12-213ENST00000461577 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC12-213ENST00000461577 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
TRAPPC12-213ENST00000461577 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
TRAPPC12-213ENST00000461577 IQGAP2Q13576 1575 aa17.65■□□□□ 0.42
TRAPPC12-213ENST00000461577 FAM9AQ8IZU1 332 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC12-213ENST00000461577 CTTNBP2Q8WZ74 1663 aa17.61■□□□□ 0.41
TRAPPC12-213ENST00000461577 CARMIL2Q6F5E8 1435 aa17.58■□□□□ 0.41
TRAPPC12-213ENST00000461577 UGGT2Q9NYU1 1516 aa17.54■□□□□ 0.4
TRAPPC12-213ENST00000461577 TTBK1Q5TCY1 1321 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC12-213ENST00000461577 TNIKQ9UKE5 1360 aa17.51■□□□□ 0.39
TRAPPC12-213ENST00000461577 KIF21BO75037 1637 aa17.5■□□□□ 0.39
TRAPPC12-213ENST00000461577 DISP1Q96F81 1524 aa17.5■□□□□ 0.39
TRAPPC12-213ENST00000461577 PTPRGP23470 1445 aa17.49■□□□□ 0.39
TRAPPC12-213ENST00000461577 KIAA0556O60303 1618 aa17.47■□□□□ 0.39
TRAPPC12-213ENST00000461577 TRHP20396 242 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-213ENST00000461577 GOLGA3Q08378 1498 aa17.47■□□□□ 0.39
TRAPPC12-213ENST00000461577 NPM1P06748 294 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRAPPC12-213ENST00000461577 EHMT2Q96KQ7 1210 aa17.44■□□□□ 0.38
TRAPPC12-213ENST00000461577 ADCY10Q96PN6 1610 aa17.43■□□□□ 0.38
TRAPPC12-213ENST00000461577 UBTFP17480 764 aaKnown RBP17.4■□□□□ 0.38
TRAPPC12-213ENST00000461577 RANGAP1P46060 587 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC12-213ENST00000461577 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
TRAPPC12-213ENST00000461577 P3H3Q8IVL6 736 aa17.37■□□□□ 0.37
TRAPPC12-213ENST00000461577 SAMD9Q5K651 1589 aa17.35■□□□□ 0.37
TRAPPC12-213ENST00000461577 UHRF1BP1LA0JNW5 1464 aa17.34■□□□□ 0.37
TRAPPC12-213ENST00000461577 ABCC2Q92887 1545 aa17.34■□□□□ 0.37
TRAPPC12-213ENST00000461577 MAPKBP1O60336 1514 aa17.31■□□□□ 0.36
TRAPPC12-213ENST00000461577 EFCAB5A4FU69 1503 aa17.29■□□□□ 0.36
TRAPPC12-213ENST00000461577 PLB1Q6P1J6 1458 aa17.29■□□□□ 0.36
TRAPPC12-213ENST00000461577 ABCA8O94911 1581 aa17.28■□□□□ 0.36
TRAPPC12-213ENST00000461577 FHOD3Q2V2M9 1422 aa17.26■□□□□ 0.35
TRAPPC12-213ENST00000461577 KDM5BQ9UGL1 1544 aa17.26■□□□□ 0.35
TRAPPC12-213ENST00000461577 KIF13AQ9H1H9 1805 aa17.26■□□□□ 0.35
TRAPPC12-213ENST00000461577 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
TRAPPC12-213ENST00000461577 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
TRAPPC12-213ENST00000461577 FAM69CQ0P6D2 419 aa17.23■□□□□ 0.35
TRAPPC12-213ENST00000461577 ASXL2Q76L83 1435 aa17.22■□□□□ 0.35
TRAPPC12-213ENST00000461577 DIP2BQ9P265 1576 aa17.21■□□□□ 0.35
TRAPPC12-213ENST00000461577 RAPGEF6Q8TEU7 1601 aa17.21■□□□□ 0.35
TRAPPC12-213ENST00000461577 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
TRAPPC12-213ENST00000461577 ARID3CA6NKF2 412 aa17.17■□□□□ 0.34
TRAPPC12-213ENST00000461577 ATP10BO94823 1461 aa17.13■□□□□ 0.33
TRAPPC12-213ENST00000461577 WDR7Q9Y4E6 1490 aa17.13■□□□□ 0.33
TRAPPC12-213ENST00000461577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC12-213ENST00000461577 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-213ENST00000461577 TSPOAP1O95153 1857 aa17.13■□□□□ 0.33
TRAPPC12-213ENST00000461577 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
TRAPPC12-213ENST00000461577 EPRSP07814 1512 aaKnown RBP17.12■□□□□ 0.33
TRAPPC12-213ENST00000461577 GLI2P10070 1586 aa17.12■□□□□ 0.33
TRAPPC12-213ENST00000461577 NUP153P49790 1475 aaKnown RBP17.11■□□□□ 0.33
TRAPPC12-213ENST00000461577 KCNH8Q96L42 1107 aa17.09■□□□□ 0.33
TRAPPC12-213ENST00000461577 ATP1B4Q9UN42 357 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC12-213ENST00000461577 CLIP1P30622 1438 aa17.09■□□□□ 0.33
TRAPPC12-213ENST00000461577 HECW1Q76N89 1606 aa17.07■□□□□ 0.32
TRAPPC12-213ENST00000461577 LOC105371045A0A1W2PR82 267 aa17.05■□□□□ 0.32
TRAPPC12-213ENST00000461577 MAP3K4Q9Y6R4 1608 aa17.04■□□□□ 0.32
TRAPPC12-213ENST00000461577 PLEKHD1A6NEE1 506 aa17.03■□□□□ 0.32
TRAPPC12-213ENST00000461577 CFAP43Q8NDM7 1665 aa17.02■□□□□ 0.32
TRAPPC12-213ENST00000461577 CDK13Q14004 1512 aaKnown RBP17.01■□□□□ 0.31
TRAPPC12-213ENST00000461577 PPRC1Q5VV67 1664 aaKnown RBP17.01■□□□□ 0.31
TRAPPC12-213ENST00000461577 CEP162Q5TB80 1403 aa17.01■□□□□ 0.31
TRAPPC12-213ENST00000461577 CD109Q6YHK3 1445 aa16.99■□□□□ 0.31
TRAPPC12-213ENST00000461577 TEX14Q8IWB6 1497 aa16.99■□□□□ 0.31
TRAPPC12-213ENST00000461577 PCF11O94913 1555 aaKnown RBP16.98■□□□□ 0.31
TRAPPC12-213ENST00000461577 CASKIN1Q8WXD9 1431 aa16.98■□□□□ 0.31
TRAPPC12-213ENST00000461577 KDM6BO15054 1643 aa16.97■□□□□ 0.31
TRAPPC12-213ENST00000461577 CDK11AQ9UQ88 783 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC12-213ENST00000461577 ABCA9Q8IUA7 1624 aa16.96■□□□□ 0.3
TRAPPC12-213ENST00000461577 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
TRAPPC12-213ENST00000461577 FYCO1Q9BQS8 1478 aa16.94■□□□□ 0.3
TRAPPC12-213ENST00000461577 MAGI3Q5TCQ9 1506 aa16.94■□□□□ 0.3
TRAPPC12-213ENST00000461577 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
TRAPPC12-213ENST00000461577 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.88■□□□□ 0.29
TRAPPC12-213ENST00000461577 TROQ12816 1431 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC12-213ENST00000461577 KIF14Q15058 1648 aa16.86■□□□□ 0.29
TRAPPC12-213ENST00000461577 TTC37Q6PGP7 1564 aa16.85■□□□□ 0.29
TRAPPC12-213ENST00000461577 PHLDB1Q86UU1 1377 aa16.83■□□□□ 0.28
TRAPPC12-213ENST00000461577 COL17A1Q9UMD9 1497 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC12-213ENST00000461577 NEO1Q92859 1461 aa16.82■□□□□ 0.28
TRAPPC12-213ENST00000461577 CFAP74Q9C0B2 1584 aa16.81■□□□□ 0.28
TRAPPC12-213ENST00000461577 MYO5CQ9NQX4 1742 aa16.81■□□□□ 0.28
TRAPPC12-213ENST00000461577 VPS8Q8N3P4 1428 aa16.8■□□□□ 0.28
TRAPPC12-213ENST00000461577 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
TRAPPC12-213ENST00000461577 FANCAO15360 1455 aa16.79■□□□□ 0.28
TRAPPC12-213ENST00000461577 PLCH2O75038 1416 aa16.78■□□□□ 0.28
TRAPPC12-213ENST00000461577 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
TRAPPC12-213ENST00000461577 AKNAQ7Z591 1439 aa16.77■□□□□ 0.27
TRAPPC12-213ENST00000461577 EFCAB2Q5VUJ9 269 aa16.75■□□□□ 0.27
TRAPPC12-213ENST00000461577 ARHGAP5Q13017 1502 aa16.74■□□□□ 0.27
TRAPPC12-213ENST00000461577 EHBP1L1Q8N3D4 1523 aa16.72■□□□□ 0.27
TRAPPC12-213ENST00000461577 RAPGEF3O95398 923 aa16.72■□□□□ 0.27
TRAPPC12-213ENST00000461577 DENND4BO75064 1496 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC12-213ENST00000461577 PREX2Q70Z35 1606 aa16.71■□□□□ 0.27
TRAPPC12-213ENST00000461577 CDC42BPBQ9Y5S2 1711 aa16.71■□□□□ 0.27
TRAPPC12-213ENST00000461577 TIAM1Q13009 1591 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms