RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 GAPVD1Q14C86 1478 aa17.38■□□□□ 0.37
NECTIN3-202ENST00000461477 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
NECTIN3-202ENST00000461477 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
NECTIN3-202ENST00000461477 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
NECTIN3-202ENST00000461477 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
NECTIN3-202ENST00000461477 CEP170Q5SW79 1584 aa17.24■□□□□ 0.35
NECTIN3-202ENST00000461477 KIF13AQ9H1H9 1805 aa17.22■□□□□ 0.35
NECTIN3-202ENST00000461477 GRIN2AQ12879 1464 aa17.22■□□□□ 0.35
NECTIN3-202ENST00000461477 ADAMTS12P58397 1594 aa17.2■□□□□ 0.34
NECTIN3-202ENST00000461477 SHROOM2Q13796 1616 aa17.19■□□□□ 0.34
NECTIN3-202ENST00000461477 NUP160Q12769 1436 aa17.19■□□□□ 0.34
NECTIN3-202ENST00000461477 NPM3O75607 178 aaKnown RBP17.11■□□□□ 0.33
NECTIN3-202ENST00000461477 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
NECTIN3-202ENST00000461477 FHAD1B1AJZ9 1412 aa17.05■□□□□ 0.32
NECTIN3-202ENST00000461477 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
NECTIN3-202ENST00000461477 TOP2BQ02880 1626 aa17.04■□□□□ 0.32
NECTIN3-202ENST00000461477 PRG4Q92954 1404 aaPredicted RBP17.03■□□□□ 0.32
NECTIN3-202ENST00000461477 KCNA4P22459 653 aa17.02■□□□□ 0.32
NECTIN3-202ENST00000461477 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
NECTIN3-202ENST00000461477 RUSC2Q8N2Y8 1516 aa16.98■□□□□ 0.31
NECTIN3-202ENST00000461477 ABCC10Q5T3U5 1492 aa16.98■□□□□ 0.31
NECTIN3-202ENST00000461477 DIP2BQ9P265 1576 aa16.98■□□□□ 0.31
NECTIN3-202ENST00000461477 ADCY10Q96PN6 1610 aa16.97■□□□□ 0.31
NECTIN3-202ENST00000461477 JPH4Q96JJ6 628 aa16.95■□□□□ 0.3
NECTIN3-202ENST00000461477 FAM69CQ0P6D2 419 aa16.94■□□□□ 0.3
NECTIN3-202ENST00000461477 MAPKBP1O60336 1514 aa16.93■□□□□ 0.3
NECTIN3-202ENST00000461477 KDM4FA0A1W2PPD8 638 aa16.93■□□□□ 0.3
NECTIN3-202ENST00000461477 TSPOAP1O95153 1857 aa16.9■□□□□ 0.3
NECTIN3-202ENST00000461477 SUPT5HO00267 1087 aaKnown RBP16.9■□□□□ 0.3
NECTIN3-202ENST00000461477 KDM6BO15054 1643 aa16.88■□□□□ 0.29
NECTIN3-202ENST00000461477 PPRC1Q5VV67 1664 aaKnown RBP16.8■□□□□ 0.28
NECTIN3-202ENST00000461477 NPM1P06748 294 aaKnown RBP eCLIP16.78■□□□□ 0.28
NECTIN3-202ENST00000461477 ILDR1Q86SU0 546 aaPredicted RBP16.78■□□□□ 0.28
NECTIN3-202ENST00000461477 KIAA0586Q9BVV6 1533 aa16.76■□□□□ 0.27
NECTIN3-202ENST00000461477 IGF1RP08069 1367 aa16.75■□□□□ 0.27
NECTIN3-202ENST00000461477 RNF39Q9H2S5 420 aa16.73■□□□□ 0.27
NECTIN3-202ENST00000461477 CUL7Q14999 1698 aa16.69■□□□□ 0.26
NECTIN3-202ENST00000461477 COL17A1Q9UMD9 1497 aaPredicted RBP16.69■□□□□ 0.26
NECTIN3-202ENST00000461477 CACNB1Q02641 598 aaPredicted RBP16.69■□□□□ 0.26
NECTIN3-202ENST00000461477 TTBK1Q5TCY1 1321 aaPredicted RBP16.68■□□□□ 0.26
NECTIN3-202ENST00000461477 ADGRL1O94910 1474 aa16.67■□□□□ 0.26
NECTIN3-202ENST00000461477 PTPRGP23470 1445 aa16.67■□□□□ 0.26
NECTIN3-202ENST00000461477 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
NECTIN3-202ENST00000461477 GLI2P10070 1586 aa16.66■□□□□ 0.26
NECTIN3-202ENST00000461477 ASXL2Q76L83 1435 aa16.66■□□□□ 0.26
NECTIN3-202ENST00000461477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.26
NECTIN3-202ENST00000461477 TNIKQ9UKE5 1360 aa16.61■□□□□ 0.25
NECTIN3-202ENST00000461477 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
NECTIN3-202ENST00000461477 MAP3K4Q9Y6R4 1608 aa16.6■□□□□ 0.25
NECTIN3-202ENST00000461477 HECW2Q9P2P5 1572 aa16.6■□□□□ 0.25
NECTIN3-202ENST00000461477 UHRF1BP1LA0JNW5 1464 aa16.59■□□□□ 0.25
NECTIN3-202ENST00000461477 PLB1Q6P1J6 1458 aa16.59■□□□□ 0.25
NECTIN3-202ENST00000461477 DISP1Q96F81 1524 aa16.59■□□□□ 0.25
NECTIN3-202ENST00000461477 EPRSP07814 1512 aaKnown RBP16.58■□□□□ 0.24
NECTIN3-202ENST00000461477 IQGAP2Q13576 1575 aa16.58■□□□□ 0.24
NECTIN3-202ENST00000461477 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
NECTIN3-202ENST00000461477 ZCCHC11Q5TAX3 1644 aaKnown RBP16.56■□□□□ 0.24
NECTIN3-202ENST00000461477 UACAQ9BZF9 1416 aa16.55■□□□□ 0.24
NECTIN3-202ENST00000461477 C1QBPQ07021 282 aaKnown RBP16.55■□□□□ 0.24
NECTIN3-202ENST00000461477 KDM5BQ9UGL1 1544 aa16.54■□□□□ 0.24
NECTIN3-202ENST00000461477 CARMIL2Q6F5E8 1435 aa16.53■□□□□ 0.24
NECTIN3-202ENST00000461477 UGGT2Q9NYU1 1516 aa16.47■□□□□ 0.23
NECTIN3-202ENST00000461477 KIAA0556O60303 1618 aa16.47■□□□□ 0.23
NECTIN3-202ENST00000461477 TEX14Q8IWB6 1497 aa16.44■□□□□ 0.22
NECTIN3-202ENST00000461477 WDR7Q9Y4E6 1490 aa16.42■□□□□ 0.22
NECTIN3-202ENST00000461477 KIF21BO75037 1637 aa16.4■□□□□ 0.22
NECTIN3-202ENST00000461477 CFAP43Q8NDM7 1665 aa16.37■□□□□ 0.21
NECTIN3-202ENST00000461477 RAPGEF2Q9Y4G8 1499 aa16.37■□□□□ 0.21
NECTIN3-202ENST00000461477 MAGI3Q5TCQ9 1506 aa16.36■□□□□ 0.21
NECTIN3-202ENST00000461477 ABCA8O94911 1581 aa16.35■□□□□ 0.21
NECTIN3-202ENST00000461477 CD109Q6YHK3 1445 aa16.34■□□□□ 0.21
NECTIN3-202ENST00000461477 CTTNBP2Q8WZ74 1663 aa16.34■□□□□ 0.21
NECTIN3-202ENST00000461477 KCNH8Q96L42 1107 aa16.31■□□□□ 0.2
NECTIN3-202ENST00000461477 ADAMTSL3P82987 1691 aa16.27■□□□□ 0.2
NECTIN3-202ENST00000461477 U3KPZ7 1027 aaPredicted RBP16.26■□□□□ 0.19
NECTIN3-202ENST00000461477 ARAP3Q8WWN8 1544 aa16.25■□□□□ 0.19
NECTIN3-202ENST00000461477 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
NECTIN3-202ENST00000461477 FBXO41Q8TF61 875 aa16.23■□□□□ 0.19
NECTIN3-202ENST00000461477 PTPRMP28827 1452 aa16.22■□□□□ 0.19
NECTIN3-202ENST00000461477 ARID3CA6NKF2 412 aa16.22■□□□□ 0.19
NECTIN3-202ENST00000461477 FRMPD1Q5SYB0 1578 aa16.21■□□□□ 0.18
NECTIN3-202ENST00000461477 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
NECTIN3-202ENST00000461477 ATP10BO94823 1461 aa16.2■□□□□ 0.18
NECTIN3-202ENST00000461477 GOLGA3Q08378 1498 aa16.2■□□□□ 0.18
NECTIN3-202ENST00000461477 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
NECTIN3-202ENST00000461477 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
NECTIN3-202ENST00000461477 RAPGEF3O95398 923 aa16.17■□□□□ 0.18
NECTIN3-202ENST00000461477 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
NECTIN3-202ENST00000461477 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
NECTIN3-202ENST00000461477 LMTK3Q96Q04 1460 aa16.15■□□□□ 0.18
NECTIN3-202ENST00000461477 PCF11O94913 1555 aaKnown RBP16.14■□□□□ 0.17
NECTIN3-202ENST00000461477 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
NECTIN3-202ENST00000461477 SIGLEC1Q9BZZ2 1709 aa16.14■□□□□ 0.17
NECTIN3-202ENST00000461477 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
NECTIN3-202ENST00000461477 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
NECTIN3-202ENST00000461477 RAPGEF6Q8TEU7 1601 aa16.08■□□□□ 0.17
NECTIN3-202ENST00000461477 NEO1Q92859 1461 aa16.08■□□□□ 0.16
NECTIN3-202ENST00000461477 RICTORQ6R327 1708 aa16.08■□□□□ 0.16
NECTIN3-202ENST00000461477 ARHGEF40Q8TER5 1519 aa16.06■□□□□ 0.16
NECTIN3-202ENST00000461477 PHLDB1Q86UU1 1377 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms