RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
NECTIN3-202ENST00000461477 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
NECTIN3-202ENST00000461477 NISCHQ9Y2I1 1504 aa24.05■■□□□ 1.44
NECTIN3-202ENST00000461477 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
NECTIN3-202ENST00000461477 PHF23Q9BUL5 403 aaPredicted RBP22.35■■□□□ 1.17
NECTIN3-202ENST00000461477 ABCC9O60706 1549 aa22.13■■□□□ 1.13
NECTIN3-202ENST00000461477 CCDC180Q9P1Z9 1646 aa21.72■■□□□ 1.07
NECTIN3-202ENST00000461477 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
NECTIN3-202ENST00000461477 FOXD1Q16676 465 aa21.01■□□□□ 0.95
NECTIN3-202ENST00000461477 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
NECTIN3-202ENST00000461477 NACADO15069 1562 aa20.58■□□□□ 0.88
NECTIN3-202ENST00000461477 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
NECTIN3-202ENST00000461477 UNC13AQ9UPW8 1703 aa20.53■□□□□ 0.88
NECTIN3-202ENST00000461477 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
NECTIN3-202ENST00000461477 BICRAQ9NZM4 1560 aa20.38■□□□□ 0.85
NECTIN3-202ENST00000461477 DCAF8L2P0C7V8 631 aa20.37■□□□□ 0.85
NECTIN3-202ENST00000461477 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
NECTIN3-202ENST00000461477 CC2D2AQ9P2K1 1620 aa19.98■□□□□ 0.79
NECTIN3-202ENST00000461477 CECR2Q9BXF3 1484 aa19.92■□□□□ 0.78
NECTIN3-202ENST00000461477 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
NECTIN3-202ENST00000461477 SHROOM4Q9ULL8 1493 aa19.85■□□□□ 0.77
NECTIN3-202ENST00000461477 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
NECTIN3-202ENST00000461477 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.76
NECTIN3-202ENST00000461477 PPP6R1Q9UPN7 881 aa19.82■□□□□ 0.76
NECTIN3-202ENST00000461477 ADRA2BP18089 450 aa19.81■□□□□ 0.76
NECTIN3-202ENST00000461477 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
NECTIN3-202ENST00000461477 PIAS4Q8N2W9 510 aaPredicted RBP19.77■□□□□ 0.76
NECTIN3-202ENST00000461477 MSH5O43196 834 aa19.64■□□□□ 0.73
NECTIN3-202ENST00000461477 DNAJC5Q9H3Z4 198 aa19.57■□□□□ 0.72
NECTIN3-202ENST00000461477 CUX2O14529 1486 aa19.13■□□□□ 0.65
NECTIN3-202ENST00000461477 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
NECTIN3-202ENST00000461477 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
NECTIN3-202ENST00000461477 ATAD2BQ9ULI0 1458 aa18.96■□□□□ 0.63
NECTIN3-202ENST00000461477 NESP48681 1621 aa18.96■□□□□ 0.63
NECTIN3-202ENST00000461477 SMARCA4P51532 1647 aa18.86■□□□□ 0.61
NECTIN3-202ENST00000461477 HMGXB3Q12766 1538 aa18.85■□□□□ 0.61
NECTIN3-202ENST00000461477 THOC2Q8NI27 1593 aaKnown RBP18.83■□□□□ 0.6
NECTIN3-202ENST00000461477 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
NECTIN3-202ENST00000461477 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
NECTIN3-202ENST00000461477 BAZ1BQ9UIG0 1483 aaKnown RBP18.7■□□□□ 0.58
NECTIN3-202ENST00000461477 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
NECTIN3-202ENST00000461477 POTEDQ86YR6 584 aa18.65■□□□□ 0.58
NECTIN3-202ENST00000461477 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.58
NECTIN3-202ENST00000461477 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.58
NECTIN3-202ENST00000461477 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
NECTIN3-202ENST00000461477 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
NECTIN3-202ENST00000461477 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
NECTIN3-202ENST00000461477 MRC2Q9UBG0 1479 aa18.42■□□□□ 0.54
NECTIN3-202ENST00000461477 WDR62O43379 1518 aa18.42■□□□□ 0.54
NECTIN3-202ENST00000461477 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
NECTIN3-202ENST00000461477 WIZO95785 1651 aa18.36■□□□□ 0.53
NECTIN3-202ENST00000461477 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
NECTIN3-202ENST00000461477 FANCD2Q9BXW9 1451 aa18.23■□□□□ 0.51
NECTIN3-202ENST00000461477 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
NECTIN3-202ENST00000461477 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
NECTIN3-202ENST00000461477 CFTRP13569 1480 aa18.15■□□□□ 0.5
NECTIN3-202ENST00000461477 OSCARQ8IYS5 282 aa18.15■□□□□ 0.5
NECTIN3-202ENST00000461477 RIMBP3CA6NJZ7 1639 aa18.11■□□□□ 0.49
NECTIN3-202ENST00000461477 RIMBP3BA6NNM3 1639 aa18.11■□□□□ 0.49
NECTIN3-202ENST00000461477 RIMBP3Q9UFD9 1639 aa18.11■□□□□ 0.49
NECTIN3-202ENST00000461477 MAPK8IP2Q13387 824 aaPredicted RBP18.09■□□□□ 0.49
NECTIN3-202ENST00000461477 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
NECTIN3-202ENST00000461477 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
NECTIN3-202ENST00000461477 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
NECTIN3-202ENST00000461477 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
NECTIN3-202ENST00000461477 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
NECTIN3-202ENST00000461477 DMRT2Q9Y5R5 561 aa17.98■□□□□ 0.47
NECTIN3-202ENST00000461477 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
NECTIN3-202ENST00000461477 IFT140Q96RY7 1462 aa17.89■□□□□ 0.45
NECTIN3-202ENST00000461477 EIF4G3O43432 1585 aaKnown RBP17.88■□□□□ 0.45
NECTIN3-202ENST00000461477 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
NECTIN3-202ENST00000461477 CCDC88BA6NC98 1476 aa17.85■□□□□ 0.45
NECTIN3-202ENST00000461477 CHD1O14646 1710 aa17.84■□□□□ 0.45
NECTIN3-202ENST00000461477 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
NECTIN3-202ENST00000461477 ARAP1Q96P48 1450 aa17.81■□□□□ 0.44
NECTIN3-202ENST00000461477 TARBP1Q13395 1621 aaKnown RBP17.79■□□□□ 0.44
NECTIN3-202ENST00000461477 AQRO60306 1485 aaKnown RBP eCLIP17.78■□□□□ 0.44
NECTIN3-202ENST00000461477 DNMBPQ6XZF7 1577 aa17.75■□□□□ 0.43
NECTIN3-202ENST00000461477 ABCC8Q09428 1581 aa17.67■□□□□ 0.42
NECTIN3-202ENST00000461477 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
NECTIN3-202ENST00000461477 POLA1P09884 1462 aaPredicted RBP17.67■□□□□ 0.42
NECTIN3-202ENST00000461477 RAD54L2Q9Y4B4 1467 aa17.65■□□□□ 0.42
NECTIN3-202ENST00000461477 FBLN2P98095 1184 aa17.63■□□□□ 0.41
NECTIN3-202ENST00000461477 CNKSR2Q8WXI2 1034 aa17.62■□□□□ 0.41
NECTIN3-202ENST00000461477 CLASP1Q7Z460 1538 aa17.61■□□□□ 0.41
NECTIN3-202ENST00000461477 TDRD9Q8NDG6 1382 aaKnown RBP17.59■□□□□ 0.41
NECTIN3-202ENST00000461477 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
NECTIN3-202ENST00000461477 SOGA1O94964 1423 aa17.53■□□□□ 0.4
NECTIN3-202ENST00000461477 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
NECTIN3-202ENST00000461477 CUX1P39880 1505 aa17.47■□□□□ 0.39
NECTIN3-202ENST00000461477 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
NECTIN3-202ENST00000461477 WDR97A6NE52 1622 aa17.46■□□□□ 0.39
NECTIN3-202ENST00000461477 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
NECTIN3-202ENST00000461477 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
NECTIN3-202ENST00000461477 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
NECTIN3-202ENST00000461477 GRIN2BQ13224 1484 aa17.41■□□□□ 0.38
NECTIN3-202ENST00000461477 PBRM1Q86U86 1689 aa17.41■□□□□ 0.38
NECTIN3-202ENST00000461477 SYNJ2O15056 1496 aa17.4■□□□□ 0.38
NECTIN3-202ENST00000461477 HOXD11P31277 338 aaPredicted RBP17.4■□□□□ 0.38
NECTIN3-202ENST00000461477 ERCC6L2Q5T890 1561 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms