RNA–Protein interactions for RNA: ENST00000460797.5

ITGB5-202, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 2,228 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-202ENST00000460797 RANGAP1P46060 587 aaPredicted RBP17.39■□□□□ 0.37
ITGB5-202ENST00000460797 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
ITGB5-202ENST00000460797 MAP3K1Q13233 1512 aa17.37■□□□□ 0.37
ITGB5-202ENST00000460797 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
ITGB5-202ENST00000460797 NESP48681 1621 aa17.36■□□□□ 0.37
ITGB5-202ENST00000460797 CUX1P39880 1505 aa17.35■□□□□ 0.37
ITGB5-202ENST00000460797 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
ITGB5-202ENST00000460797 ARHGAP35Q9NRY4 1499 aa17.34■□□□□ 0.37
ITGB5-202ENST00000460797 SETD5Q9C0A6 1442 aa17.33■□□□□ 0.36
ITGB5-202ENST00000460797 LAMC3Q9Y6N6 1575 aa17.33■□□□□ 0.36
ITGB5-202ENST00000460797 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
ITGB5-202ENST00000460797 DDX10Q13206 875 aaKnown RBP17.32■□□□□ 0.36
ITGB5-202ENST00000460797 FANCIQ9NVI1 1328 aa17.3■□□□□ 0.36
ITGB5-202ENST00000460797 TIAM1Q13009 1591 aa17.3■□□□□ 0.36
ITGB5-202ENST00000460797 MSH5O43196 834 aa17.27■□□□□ 0.36
ITGB5-202ENST00000460797 KIF27Q86VH2 1401 aa17.27■□□□□ 0.35
ITGB5-202ENST00000460797 ANP32CO43423 234 aa17.24■□□□□ 0.35
ITGB5-202ENST00000460797 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.35
ITGB5-202ENST00000460797 ITGAEP38570 1179 aa17.21■□□□□ 0.35
ITGB5-202ENST00000460797 LRRC9Q6ZRR7 1453 aa17.2■□□□□ 0.34
ITGB5-202ENST00000460797 TRIM52Q96A61 297 aa17.2■□□□□ 0.34
ITGB5-202ENST00000460797 MYT1LQ9UL68 1186 aa17.19■□□□□ 0.34
ITGB5-202ENST00000460797 CFAP43Q8NDM7 1665 aa17.18■□□□□ 0.34
ITGB5-202ENST00000460797 SIN3AQ96ST3 1273 aa17.17■□□□□ 0.34
ITGB5-202ENST00000460797 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
ITGB5-202ENST00000460797 ERICH6BQ5W0A0 696 aa17.15■□□□□ 0.34
ITGB5-202ENST00000460797 FGD5Q6ZNL6 1462 aa17.15■□□□□ 0.34
ITGB5-202ENST00000460797 PHLDB1Q86UU1 1377 aa17.15■□□□□ 0.34
ITGB5-202ENST00000460797 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
ITGB5-202ENST00000460797 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
ITGB5-202ENST00000460797 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.13■□□□□ 0.33
ITGB5-202ENST00000460797 KIF21AQ7Z4S6 1674 aa17.12■□□□□ 0.33
ITGB5-202ENST00000460797 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
ITGB5-202ENST00000460797 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
ITGB5-202ENST00000460797 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
ITGB5-202ENST00000460797 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
ITGB5-202ENST00000460797 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
ITGB5-202ENST00000460797 PCF11O94913 1555 aaKnown RBP17.03■□□□□ 0.32
ITGB5-202ENST00000460797 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.32
ITGB5-202ENST00000460797 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
ITGB5-202ENST00000460797 FAM50AQ14320 339 aaKnown RBP17.02■□□□□ 0.32
ITGB5-202ENST00000460797 IGF1RP08069 1367 aa17.01■□□□□ 0.31
ITGB5-202ENST00000460797 PPP4R2Q9NY27 417 aa17.01■□□□□ 0.31
ITGB5-202ENST00000460797 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
ITGB5-202ENST00000460797 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
ITGB5-202ENST00000460797 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
ITGB5-202ENST00000460797 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
ITGB5-202ENST00000460797 FYCO1Q9BQS8 1478 aa16.97■□□□□ 0.31
ITGB5-202ENST00000460797 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
ITGB5-202ENST00000460797 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
ITGB5-202ENST00000460797 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.32e-10■□□□□ 9.9
ITGB5-202ENST00000460797 HFM1A2PYH4 1435 aa16.94■□□□□ 0.3
ITGB5-202ENST00000460797 NCOA2Q15596 1464 aa16.94■□□□□ 0.3
ITGB5-202ENST00000460797 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
ITGB5-202ENST00000460797 PTPN23Q9H3S7 1636 aa16.93■□□□□ 0.3
ITGB5-202ENST00000460797 DEKP35659 375 aaKnown RBP16.93■□□□□ 0.3
ITGB5-202ENST00000460797 IRX6P78412 446 aaPredicted RBP16.92■□□□□ 0.3
ITGB5-202ENST00000460797 EFCAB5A4FU69 1503 aa16.92■□□□□ 0.3
ITGB5-202ENST00000460797 CASKIN1Q8WXD9 1431 aa16.91■□□□□ 0.3
ITGB5-202ENST00000460797 FGD6Q6ZV73 1430 aa16.91■□□□□ 0.3
ITGB5-202ENST00000460797 ERCC6Q03468 1493 aa16.9■□□□□ 0.3
ITGB5-202ENST00000460797 WDR62O43379 1518 aa16.88■□□□□ 0.29
ITGB5-202ENST00000460797 TARBP1Q13395 1621 aaKnown RBP16.87■□□□□ 0.29
ITGB5-202ENST00000460797 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
ITGB5-202ENST00000460797 CNTLNQ9NXG0 1405 aa16.87■□□□□ 0.29
ITGB5-202ENST00000460797 WASHC2AQ641Q2 1341 aa16.86■□□□□ 0.29
ITGB5-202ENST00000460797 NOP58Q9Y2X3 529 aaKnown RBP16.85■□□□□ 0.29
ITGB5-202ENST00000460797 ZBED9Q6R2W3 1325 aa16.85■□□□□ 0.29
ITGB5-202ENST00000460797 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
ITGB5-202ENST00000460797 NAIPQ13075 1403 aa16.83■□□□□ 0.29
ITGB5-202ENST00000460797 PTPRKQ15262 1439 aa16.83■□□□□ 0.28
ITGB5-202ENST00000460797 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
ITGB5-202ENST00000460797 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
ITGB5-202ENST00000460797 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
ITGB5-202ENST00000460797 HECW1Q76N89 1606 aa16.8■□□□□ 0.28
ITGB5-202ENST00000460797 HSPA5P11021 654 aaKnown RBP16.8■□□□□ 0.28
ITGB5-202ENST00000460797 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
ITGB5-202ENST00000460797 CUL7Q14999 1698 aa16.78■□□□□ 0.28
ITGB5-202ENST00000460797 B4GALNT3Q6L9W6 998 aa16.78■□□□□ 0.28
ITGB5-202ENST00000460797 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
ITGB5-202ENST00000460797 PRKCSHP14314 528 aaPredicted RBP16.78■□□□□ 0.28
ITGB5-202ENST00000460797 SNAPC4Q5SXM2 1469 aa16.77■□□□□ 0.28
ITGB5-202ENST00000460797 NCOA1Q15788 1441 aa16.77■□□□□ 0.28
ITGB5-202ENST00000460797 CTTNBP2Q8WZ74 1663 aa16.76■□□□□ 0.27
ITGB5-202ENST00000460797 GCC2Q8IWJ2 1684 aa16.76■□□□□ 0.27
ITGB5-202ENST00000460797 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
ITGB5-202ENST00000460797 PRKRIP1Q9H875 184 aaPredicted RBP16.76■□□□□ 0.27
ITGB5-202ENST00000460797 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
ITGB5-202ENST00000460797 CCDC184Q52MB2 194 aa16.74■□□□□ 0.27
ITGB5-202ENST00000460797 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
ITGB5-202ENST00000460797 CCDC7Q96M83 1385 aa16.73■□□□□ 0.27
ITGB5-202ENST00000460797 SMG6Q86US8 1419 aaKnown RBP16.72■□□□□ 0.27
ITGB5-202ENST00000460797 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
ITGB5-202ENST00000460797 DENND4BO75064 1496 aaPredicted RBP16.72■□□□□ 0.27
ITGB5-202ENST00000460797 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
ITGB5-202ENST00000460797 AKNAQ7Z591 1439 aa16.71■□□□□ 0.27
ITGB5-202ENST00000460797 SUPT6HQ7KZ85 1726 aaKnown RBP16.71■□□□□ 0.27
ITGB5-202ENST00000460797 P3H3Q8IVL6 736 aa16.71■□□□□ 0.27
ITGB5-202ENST00000460797 RNF123Q5XPI4 1314 aa16.71■□□□□ 0.27
ITGB5-202ENST00000460797 ATP1B4Q9UN42 357 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms