RNA–Protein interactions for RNA: ENST00000460797.5

ITGB5-202, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 2,228 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-202ENST00000460797 NISCHQ9Y2I1 1504 aa24.02■■□□□ 1.44
ITGB5-202ENST00000460797 CCDC180Q9P1Z9 1646 aa20.87■□□□□ 0.93
ITGB5-202ENST00000460797 HRCP23327 699 aa20.7■□□□□ 0.9
ITGB5-202ENST00000460797 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
ITGB5-202ENST00000460797 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
ITGB5-202ENST00000460797 MYO15BQ96JP2 1530 aa20.38■□□□□ 0.85
ITGB5-202ENST00000460797 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
ITGB5-202ENST00000460797 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
ITGB5-202ENST00000460797 PCGF6Q9BYE7 350 aa20.17■□□□□ 0.82
ITGB5-202ENST00000460797 DCAF1Q9Y4B6 1507 aa20.13■□□□□ 0.81
ITGB5-202ENST00000460797 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
ITGB5-202ENST00000460797 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
ITGB5-202ENST00000460797 DCAF8L2P0C7V8 631 aa19.88■□□□□ 0.77
ITGB5-202ENST00000460797 ABCC9O60706 1549 aa19.74■□□□□ 0.75
ITGB5-202ENST00000460797 TRIM26Q12899 539 aaPredicted RBP19.74■□□□□ 0.75
ITGB5-202ENST00000460797 ZEB1P37275 1124 aaPredicted RBP19.64■□□□□ 0.73
ITGB5-202ENST00000460797 LOC105371045A0A1W2PR82 267 aa19.6■□□□□ 0.73
ITGB5-202ENST00000460797 NACADO15069 1562 aa19.45■□□□□ 0.7
ITGB5-202ENST00000460797 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
ITGB5-202ENST00000460797 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
ITGB5-202ENST00000460797 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
ITGB5-202ENST00000460797 MYT1Q01538 1121 aa19.15■□□□□ 0.66
ITGB5-202ENST00000460797 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
ITGB5-202ENST00000460797 ACIN1Q9UKV3 1341 aaKnown RBP19.06■□□□□ 0.64
ITGB5-202ENST00000460797 TRIM41Q8WV44 630 aa19.04■□□□□ 0.64
ITGB5-202ENST00000460797 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
ITGB5-202ENST00000460797 UNC13AQ9UPW8 1703 aa18.89■□□□□ 0.62
ITGB5-202ENST00000460797 CENPBP07199 599 aaPredicted RBP18.85■□□□□ 0.61
ITGB5-202ENST00000460797 FAM9AQ8IZU1 332 aaPredicted RBP18.82■□□□□ 0.6
ITGB5-202ENST00000460797 GTF3C3Q9Y5Q9 886 aa18.79■□□□□ 0.6
ITGB5-202ENST00000460797 DIEXFQ68CQ4 756 aaKnown RBP18.76■□□□□ 0.59
ITGB5-202ENST00000460797 CCER1Q8TC90 406 aaPredicted RBP18.75■□□□□ 0.59
ITGB5-202ENST00000460797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
ITGB5-202ENST00000460797 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
ITGB5-202ENST00000460797 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
ITGB5-202ENST00000460797 PABPN1Q86U42 306 aaKnown RBP eCLIP18.68■□□□□ 0.58
ITGB5-202ENST00000460797 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.57
ITGB5-202ENST00000460797 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
ITGB5-202ENST00000460797 MROH2BQ7Z745 1585 aa18.57■□□□□ 0.56
ITGB5-202ENST00000460797 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
ITGB5-202ENST00000460797 BAZ1AQ9NRL2 1556 aaPredicted RBP18.52■□□□□ 0.56
ITGB5-202ENST00000460797 ZNF316A6NFI3 1004 aaPredicted RBP18.49■□□□□ 0.55
ITGB5-202ENST00000460797 WIZO95785 1651 aa18.46■□□□□ 0.55
ITGB5-202ENST00000460797 SMARCA4P51532 1647 aa18.43■□□□□ 0.54
ITGB5-202ENST00000460797 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
ITGB5-202ENST00000460797 TNIKQ9UKE5 1360 aa18.36■□□□□ 0.53
ITGB5-202ENST00000460797 EEA1Q15075 1411 aa18.29■□□□□ 0.52
ITGB5-202ENST00000460797 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.51
ITGB5-202ENST00000460797 MIER1Q8N108 512 aa18.25■□□□□ 0.51
ITGB5-202ENST00000460797 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
ITGB5-202ENST00000460797 CLSPNQ9HAW4 1339 aa18.24■□□□□ 0.51
ITGB5-202ENST00000460797 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
ITGB5-202ENST00000460797 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
ITGB5-202ENST00000460797 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
ITGB5-202ENST00000460797 SOGA1O94964 1423 aa18.17■□□□□ 0.5
ITGB5-202ENST00000460797 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
ITGB5-202ENST00000460797 GOLGA3Q08378 1498 aa18.15■□□□□ 0.5
ITGB5-202ENST00000460797 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.5
ITGB5-202ENST00000460797 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
ITGB5-202ENST00000460797 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
ITGB5-202ENST00000460797 RUSC2Q8N2Y8 1516 aa18.04■□□□□ 0.48
ITGB5-202ENST00000460797 KIF21BO75037 1637 aa18.03■□□□□ 0.48
ITGB5-202ENST00000460797 BAZ1BQ9UIG0 1483 aaKnown RBP18.03■□□□□ 0.48
ITGB5-202ENST00000460797 UBTFP17480 764 aaKnown RBP18.02■□□□□ 0.48
ITGB5-202ENST00000460797 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
ITGB5-202ENST00000460797 CEP164Q9UPV0 1460 aa17.99■□□□□ 0.47
ITGB5-202ENST00000460797 NCAPD3P42695 1498 aa17.98■□□□□ 0.47
ITGB5-202ENST00000460797 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
ITGB5-202ENST00000460797 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
ITGB5-202ENST00000460797 CLIP1P30622 1438 aa17.92■□□□□ 0.46
ITGB5-202ENST00000460797 HMGXB3Q12766 1538 aa17.92■□□□□ 0.46
ITGB5-202ENST00000460797 ANP32EQ9BTT0 268 aa17.89■□□□□ 0.45
ITGB5-202ENST00000460797 TSHZ2Q9NRE2 1034 aa17.88■□□□□ 0.45
ITGB5-202ENST00000460797 CC2D2AQ9P2K1 1620 aa17.85■□□□□ 0.45
ITGB5-202ENST00000460797 DHX57Q6P158 1386 aaKnown RBP17.84■□□□□ 0.45
ITGB5-202ENST00000460797 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
ITGB5-202ENST00000460797 APLP2Q06481 763 aa17.78■□□□□ 0.44
ITGB5-202ENST00000460797 CUX2O14529 1486 aa17.73■□□□□ 0.43
ITGB5-202ENST00000460797 RAPGEF2Q9Y4G8 1499 aa17.72■□□□□ 0.43
ITGB5-202ENST00000460797 BCL11AQ9H165 835 aa17.68■□□□□ 0.42
ITGB5-202ENST00000460797 RRBP1Q9P2E9 1410 aaKnown RBP17.67■□□□□ 0.42
ITGB5-202ENST00000460797 ERICH3Q5RHP9 1530 aa17.64■□□□□ 0.41
ITGB5-202ENST00000460797 ARAP1Q96P48 1450 aa17.6■□□□□ 0.41
ITGB5-202ENST00000460797 CFTRP13569 1480 aa17.59■□□□□ 0.41
ITGB5-202ENST00000460797 TOP2BQ02880 1626 aa17.56■□□□□ 0.4
ITGB5-202ENST00000460797 PRXQ9BXM0 1461 aa17.53■□□□□ 0.4
ITGB5-202ENST00000460797 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
ITGB5-202ENST00000460797 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
ITGB5-202ENST00000460797 MAPKBP1O60336 1514 aa17.5■□□□□ 0.39
ITGB5-202ENST00000460797 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
ITGB5-202ENST00000460797 KANK4Q5T7N3 995 aaPredicted RBP17.49■□□□□ 0.39
ITGB5-202ENST00000460797 FKBP8Q14318 412 aa17.48■□□□□ 0.39
ITGB5-202ENST00000460797 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
ITGB5-202ENST00000460797 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
ITGB5-202ENST00000460797 RBM19Q9Y4C8 960 aaKnown RBP17.46■□□□□ 0.39
ITGB5-202ENST00000460797 PRDM2Q13029 1718 aa17.45■□□□□ 0.38
ITGB5-202ENST00000460797 BCANQ96GW7 911 aa17.43■□□□□ 0.38
ITGB5-202ENST00000460797 NEFLP07196 543 aa17.41■□□□□ 0.38
ITGB5-202ENST00000460797 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
ITGB5-202ENST00000460797 CCER2I3L3R5 266 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms