RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 EIF4G3O43432 1585 aaKnown RBP22.65■■□□□ 1.22
SSR4-206ENST00000460616 EEA1Q15075 1411 aa22.65■■□□□ 1.22
SSR4-206ENST00000460616 GAPVD1Q14C86 1478 aa22.62■■□□□ 1.21
SSR4-206ENST00000460616 PBRM1Q86U86 1689 aa22.61■■□□□ 1.21
SSR4-206ENST00000460616 ANP32EQ9BTT0 268 aa22.59■■□□□ 1.21
SSR4-206ENST00000460616 TSHZ2Q9NRE2 1034 aa22.57■■□□□ 1.2
SSR4-206ENST00000460616 IGF1RP08069 1367 aa22.56■■□□□ 1.2
SSR4-206ENST00000460616 GOLGA3Q08378 1498 aa22.56■■□□□ 1.2
SSR4-206ENST00000460616 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
SSR4-206ENST00000460616 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
SSR4-206ENST00000460616 PRXQ9BXM0 1461 aa22.47■■□□□ 1.19
SSR4-206ENST00000460616 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
SSR4-206ENST00000460616 KIF21BO75037 1637 aa22.47■■□□□ 1.19
SSR4-206ENST00000460616 CUL7Q14999 1698 aa22.45■■□□□ 1.18
SSR4-206ENST00000460616 SNAPC4Q5SXM2 1469 aa22.45■■□□□ 1.18
SSR4-206ENST00000460616 APLP2Q06481 763 aa22.43■■□□□ 1.18
SSR4-206ENST00000460616 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
SSR4-206ENST00000460616 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
SSR4-206ENST00000460616 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
SSR4-206ENST00000460616 CLIP1P30622 1438 aa22.38■■□□□ 1.17
SSR4-206ENST00000460616 VPS8Q8N3P4 1428 aa22.36■■□□□ 1.17
SSR4-206ENST00000460616 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
SSR4-206ENST00000460616 FHAD1B1AJZ9 1412 aa22.33■■□□□ 1.17
SSR4-206ENST00000460616 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
SSR4-206ENST00000460616 CHD1O14646 1710 aa22.28■■□□□ 1.16
SSR4-206ENST00000460616 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
SSR4-206ENST00000460616 FBLN2P98095 1184 aa22.26■■□□□ 1.15
SSR4-206ENST00000460616 GRIN2AQ12879 1464 aa22.25■■□□□ 1.15
SSR4-206ENST00000460616 CHMP7Q8WUX9 453 aaPredicted RBP22.22■■□□□ 1.15
SSR4-206ENST00000460616 CTTNBP2Q8WZ74 1663 aa22.21■■□□□ 1.15
SSR4-206ENST00000460616 RANGAP1P46060 587 aaPredicted RBP22.18■■□□□ 1.14
SSR4-206ENST00000460616 BCANQ96GW7 911 aa22.18■■□□□ 1.14
SSR4-206ENST00000460616 CEP170Q5SW79 1584 aa22.17■■□□□ 1.14
SSR4-206ENST00000460616 KCNH8Q96L42 1107 aa22.16■■□□□ 1.14
SSR4-206ENST00000460616 FKBP8Q14318 412 aa22.14■■□□□ 1.13
SSR4-206ENST00000460616 NUP160Q12769 1436 aa22.08■■□□□ 1.13
SSR4-206ENST00000460616 RBM19Q9Y4C8 960 aaKnown RBP22.07■■□□□ 1.12
SSR4-206ENST00000460616 IQGAP2Q13576 1575 aa22.05■■□□□ 1.12
SSR4-206ENST00000460616 KIAA0586Q9BVV6 1533 aa22.02■■□□□ 1.12
SSR4-206ENST00000460616 KANK4Q5T7N3 995 aaPredicted RBP22■■□□□ 1.11
SSR4-206ENST00000460616 NEFLP07196 543 aa21.99■■□□□ 1.11
SSR4-206ENST00000460616 ARHGAP35Q9NRY4 1499 aa21.97■■□□□ 1.11
SSR4-206ENST00000460616 RRBP1Q9P2E9 1410 aaKnown RBP21.95■■□□□ 1.1
SSR4-206ENST00000460616 CLASP1Q7Z460 1538 aa21.94■■□□□ 1.1
SSR4-206ENST00000460616 P3H3Q8IVL6 736 aa21.94■■□□□ 1.1
SSR4-206ENST00000460616 DDX10Q13206 875 aaKnown RBP21.92■■□□□ 1.1
SSR4-206ENST00000460616 SAMD9Q5K651 1589 aa21.92■■□□□ 1.1
SSR4-206ENST00000460616 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
SSR4-206ENST00000460616 UGGT2Q9NYU1 1516 aa21.91■■□□□ 1.1
SSR4-206ENST00000460616 FHOD3Q2V2M9 1422 aa21.88■■□□□ 1.09
SSR4-206ENST00000460616 DISP1Q96F81 1524 aa21.88■■□□□ 1.09
SSR4-206ENST00000460616 ITGAEP38570 1179 aa21.87■■□□□ 1.09
SSR4-206ENST00000460616 JPH4Q96JJ6 628 aa21.87■■□□□ 1.09
SSR4-206ENST00000460616 SHROOM2Q13796 1616 aa21.87■■□□□ 1.09
SSR4-206ENST00000460616 EFCAB5A4FU69 1503 aa21.87■■□□□ 1.09
SSR4-206ENST00000460616 CCNB3Q8WWL7 1395 aa21.86■■□□□ 1.09
SSR4-206ENST00000460616 KIAA0556O60303 1618 aa21.86■■□□□ 1.09
SSR4-206ENST00000460616 OSCARQ8IYS5 282 aa21.85■■□□□ 1.09
SSR4-206ENST00000460616 ERCC6L2Q5T890 1561 aa21.85■■□□□ 1.09
SSR4-206ENST00000460616 MSH5O43196 834 aa21.82■■□□□ 1.08
SSR4-206ENST00000460616 TRIM52Q96A61 297 aa21.81■■□□□ 1.08
SSR4-206ENST00000460616 PPP1R15AO75807 674 aaPredicted RBP21.81■■□□□ 1.08
SSR4-206ENST00000460616 PRG4Q92954 1404 aaPredicted RBP21.81■■□□□ 1.08
SSR4-206ENST00000460616 RAB3GAP2Q9H2M9 1393 aa21.79■■□□□ 1.08
SSR4-206ENST00000460616 CCER2I3L3R5 266 aa21.79■■□□□ 1.08
SSR4-206ENST00000460616 MAPKBP1O60336 1514 aa21.77■■□□□ 1.08
SSR4-206ENST00000460616 ANP32CO43423 234 aa21.74■■□□□ 1.07
SSR4-206ENST00000460616 CARMIL2Q6F5E8 1435 aa21.72■■□□□ 1.07
SSR4-206ENST00000460616 FANCIQ9NVI1 1328 aa21.72■■□□□ 1.07
SSR4-206ENST00000460616 PCF11O94913 1555 aaKnown RBP21.72■■□□□ 1.07
SSR4-206ENST00000460616 SIN3AQ96ST3 1273 aa21.7■■□□□ 1.06
SSR4-206ENST00000460616 ERICH6Q7L0X2 663 aa21.68■■□□□ 1.06
SSR4-206ENST00000460616 SETD5Q9C0A6 1442 aa21.66■■□□□ 1.06
SSR4-206ENST00000460616 TIMELESSQ9UNS1 1208 aa21.66■■□□□ 1.06
SSR4-206ENST00000460616 CDK11AQ9UQ88 783 aaPredicted RBP21.66■■□□□ 1.06
SSR4-206ENST00000460616 HIRIP3Q9BW71 556 aaPredicted RBP21.65■■□□□ 1.06
SSR4-206ENST00000460616 LRRIQ1Q96JM4 1722 aa21.65■■□□□ 1.06
SSR4-206ENST00000460616 FMN1Q68DA7 1419 aa21.65■■□□□ 1.06
SSR4-206ENST00000460616 PLB1Q6P1J6 1458 aa21.62■■□□□ 1.05
SSR4-206ENST00000460616 ATP1B4Q9UN42 357 aaPredicted RBP21.61■■□□□ 1.05
SSR4-206ENST00000460616 PTPRGP23470 1445 aa21.59■■□□□ 1.05
SSR4-206ENST00000460616 ARHGEF11O15085 1522 aa21.59■■□□□ 1.05
SSR4-206ENST00000460616 CASKIN1Q8WXD9 1431 aa21.59■■□□□ 1.05
SSR4-206ENST00000460616 RAPGEF6Q8TEU7 1601 aa21.58■■□□□ 1.05
SSR4-206ENST00000460616 FYCO1Q9BQS8 1478 aa21.57■■□□□ 1.04
SSR4-206ENST00000460616 ARID3CA6NKF2 412 aa21.57■■□□□ 1.04
SSR4-206ENST00000460616 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
SSR4-206ENST00000460616 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
SSR4-206ENST00000460616 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
SSR4-206ENST00000460616 MYT1LQ9UL68 1186 aa21.55■■□□□ 1.04
SSR4-206ENST00000460616 ABCA8O94911 1581 aa21.55■■□□□ 1.04
SSR4-206ENST00000460616 HECW1Q76N89 1606 aa21.54■■□□□ 1.04
SSR4-206ENST00000460616 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.04
SSR4-206ENST00000460616 IRX6P78412 446 aaPredicted RBP21.51■■□□□ 1.03
SSR4-206ENST00000460616 CDK13Q14004 1512 aaKnown RBP21.51■■□□□ 1.03
SSR4-206ENST00000460616 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
SSR4-206ENST00000460616 TIAM1Q13009 1591 aa21.49■■□□□ 1.03
SSR4-206ENST00000460616 HNRNPUQ00839 825 aaKnown RBP eCLIP21.49■■□□□ 1.03
SSR4-206ENST00000460616 FAM50AQ14320 339 aaKnown RBP21.49■■□□□ 1.03
SSR4-206ENST00000460616 EPRSP07814 1512 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms