RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
CCDC12-204ENST00000460035 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
CCDC12-204ENST00000460035 KIF21BO75037 1637 aa18.05■□□□□ 0.48
CCDC12-204ENST00000460035 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
CCDC12-204ENST00000460035 ARHGEF11O15085 1522 aa18.03■□□□□ 0.48
CCDC12-204ENST00000460035 KIAA0586Q9BVV6 1533 aa18.03■□□□□ 0.48
CCDC12-204ENST00000460035 IQGAP2Q13576 1575 aa18■□□□□ 0.47
CCDC12-204ENST00000460035 ERCC6L2Q5T890 1561 aa17.93■□□□□ 0.46
CCDC12-204ENST00000460035 JPH4Q96JJ6 628 aa17.91■□□□□ 0.46
CCDC12-204ENST00000460035 UGGT2Q9NYU1 1516 aa17.9■□□□□ 0.46
CCDC12-204ENST00000460035 PRG4Q92954 1404 aaPredicted RBP17.89■□□□□ 0.46
CCDC12-204ENST00000460035 ARAP1Q96P48 1450 aa17.89■□□□□ 0.45
CCDC12-204ENST00000460035 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
CCDC12-204ENST00000460035 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
CCDC12-204ENST00000460035 KIAA0556O60303 1618 aa17.83■□□□□ 0.45
CCDC12-204ENST00000460035 DISP1Q96F81 1524 aa17.82■□□□□ 0.44
CCDC12-204ENST00000460035 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
CCDC12-204ENST00000460035 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
CCDC12-204ENST00000460035 SAMD9Q5K651 1589 aa17.79■□□□□ 0.44
CCDC12-204ENST00000460035 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
CCDC12-204ENST00000460035 RANGAP1P46060 587 aaPredicted RBP17.74■□□□□ 0.43
CCDC12-204ENST00000460035 EFCAB5A4FU69 1503 aa17.73■□□□□ 0.43
CCDC12-204ENST00000460035 TNIKQ9UKE5 1360 aa17.73■□□□□ 0.43
CCDC12-204ENST00000460035 TTBK1Q5TCY1 1321 aaPredicted RBP17.72■□□□□ 0.43
CCDC12-204ENST00000460035 PTPRGP23470 1445 aa17.69■□□□□ 0.42
CCDC12-204ENST00000460035 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
CCDC12-204ENST00000460035 P3H3Q8IVL6 736 aa17.66■□□□□ 0.42
CCDC12-204ENST00000460035 UHRF1BP1LA0JNW5 1464 aa17.63■□□□□ 0.41
CCDC12-204ENST00000460035 ABCA8O94911 1581 aa17.62■□□□□ 0.41
CCDC12-204ENST00000460035 ARHGAP35Q9NRY4 1499 aa17.62■□□□□ 0.41
CCDC12-204ENST00000460035 ABCC2Q92887 1545 aa17.62■□□□□ 0.41
CCDC12-204ENST00000460035 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
CCDC12-204ENST00000460035 UACAQ9BZF9 1416 aa17.6■□□□□ 0.41
CCDC12-204ENST00000460035 FHOD3Q2V2M9 1422 aa17.58■□□□□ 0.41
CCDC12-204ENST00000460035 RAPGEF6Q8TEU7 1601 aa17.58■□□□□ 0.4
CCDC12-204ENST00000460035 PLB1Q6P1J6 1458 aa17.56■□□□□ 0.4
CCDC12-204ENST00000460035 ZCCHC11Q5TAX3 1644 aaKnown RBP17.54■□□□□ 0.4
CCDC12-204ENST00000460035 CLIP1P30622 1438 aa17.54■□□□□ 0.4
CCDC12-204ENST00000460035 MAPKBP1O60336 1514 aa17.53■□□□□ 0.4
CCDC12-204ENST00000460035 KDM5BQ9UGL1 1544 aa17.53■□□□□ 0.4
CCDC12-204ENST00000460035 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCDC12-204ENST00000460035 CEP162Q5TB80 1403 aa17.51■□□□□ 0.39
CCDC12-204ENST00000460035 FMN1Q68DA7 1419 aa17.5■□□□□ 0.39
CCDC12-204ENST00000460035 KIF13AQ9H1H9 1805 aa17.49■□□□□ 0.39
CCDC12-204ENST00000460035 HECW1Q76N89 1606 aa17.47■□□□□ 0.39
CCDC12-204ENST00000460035 NUP153P49790 1475 aaKnown RBP17.46■□□□□ 0.39
CCDC12-204ENST00000460035 LRRIQ1Q96JM4 1722 aa17.46■□□□□ 0.39
CCDC12-204ENST00000460035 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
CCDC12-204ENST00000460035 ARID3CA6NKF2 412 aa17.42■□□□□ 0.38
CCDC12-204ENST00000460035 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
CCDC12-204ENST00000460035 ATP10BO94823 1461 aa17.42■□□□□ 0.38
CCDC12-204ENST00000460035 DIP2BQ9P265 1576 aa17.41■□□□□ 0.38
CCDC12-204ENST00000460035 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
CCDC12-204ENST00000460035 ASXL2Q76L83 1435 aa17.4■□□□□ 0.38
CCDC12-204ENST00000460035 CASKIN1Q8WXD9 1431 aa17.39■□□□□ 0.38
CCDC12-204ENST00000460035 ABCC10Q5T3U5 1492 aa17.38■□□□□ 0.37
CCDC12-204ENST00000460035 FYCO1Q9BQS8 1478 aa17.38■□□□□ 0.37
CCDC12-204ENST00000460035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.38■□□□□ 0.37
CCDC12-204ENST00000460035 HNRNPUL2Q1KMD3 747 aaKnown RBP17.38■□□□□ 0.37
CCDC12-204ENST00000460035 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
CCDC12-204ENST00000460035 EPRSP07814 1512 aaKnown RBP17.37■□□□□ 0.37
CCDC12-204ENST00000460035 GLI2P10070 1586 aa17.36■□□□□ 0.37
CCDC12-204ENST00000460035 CDK13Q14004 1512 aaKnown RBP17.34■□□□□ 0.37
CCDC12-204ENST00000460035 CCDC18Q5T9S5 1454 aa17.33■□□□□ 0.37
CCDC12-204ENST00000460035 TSPOAP1O95153 1857 aa17.32■□□□□ 0.36
CCDC12-204ENST00000460035 CFAP43Q8NDM7 1665 aa17.31■□□□□ 0.36
CCDC12-204ENST00000460035 MAP3K4Q9Y6R4 1608 aa17.31■□□□□ 0.36
CCDC12-204ENST00000460035 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
CCDC12-204ENST00000460035 FAM69CQ0P6D2 419 aa17.29■□□□□ 0.36
CCDC12-204ENST00000460035 ABCA9Q8IUA7 1624 aa17.28■□□□□ 0.36
CCDC12-204ENST00000460035 PPRC1Q5VV67 1664 aaKnown RBP17.27■□□□□ 0.36
CCDC12-204ENST00000460035 KCNH8Q96L42 1107 aa17.27■□□□□ 0.36
CCDC12-204ENST00000460035 PLEKHD1A6NEE1 506 aa17.24■□□□□ 0.35
CCDC12-204ENST00000460035 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.35
CCDC12-204ENST00000460035 CDK11AQ9UQ88 783 aaPredicted RBP17.21■□□□□ 0.35
CCDC12-204ENST00000460035 KIF14Q15058 1648 aa17.21■□□□□ 0.35
CCDC12-204ENST00000460035 MAGI3Q5TCQ9 1506 aa17.21■□□□□ 0.34
CCDC12-204ENST00000460035 TIAM1Q13009 1591 aa17.2■□□□□ 0.34
CCDC12-204ENST00000460035 TTC37Q6PGP7 1564 aa17.19■□□□□ 0.34
CCDC12-204ENST00000460035 MYO5CQ9NQX4 1742 aa17.19■□□□□ 0.34
CCDC12-204ENST00000460035 MAP3K1Q13233 1512 aa17.19■□□□□ 0.34
CCDC12-204ENST00000460035 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■■□□ 16.6
CCDC12-204ENST00000460035 EHBP1L1Q8N3D4 1523 aa17.16■□□□□ 0.34
CCDC12-204ENST00000460035 CD109Q6YHK3 1445 aa17.15■□□□□ 0.34
CCDC12-204ENST00000460035 TEX14Q8IWB6 1497 aa17.15■□□□□ 0.34
CCDC12-204ENST00000460035 CDC42BPAQ5VT25 1732 aa17.14■□□□□ 0.33
CCDC12-204ENST00000460035 SUPT6HQ7KZ85 1726 aaKnown RBP17.12■□□□□ 0.33
CCDC12-204ENST00000460035 CDC42BPBQ9Y5S2 1711 aa17.12■□□□□ 0.33
CCDC12-204ENST00000460035 ARAP3Q8WWN8 1544 aa17.11■□□□□ 0.33
CCDC12-204ENST00000460035 CFAP74Q9C0B2 1584 aa17.11■□□□□ 0.33
CCDC12-204ENST00000460035 PREX2Q70Z35 1606 aa17.11■□□□□ 0.33
CCDC12-204ENST00000460035 APLP2Q06481 763 aa17.1■□□□□ 0.33
CCDC12-204ENST00000460035 MTUS2Q5JR59 1369 aa17.1■□□□□ 0.33
CCDC12-204ENST00000460035 LRRC9Q6ZRR7 1453 aa17.08■□□□□ 0.32
CCDC12-204ENST00000460035 ITSN2Q9NZM3 1697 aa17.07■□□□□ 0.32
CCDC12-204ENST00000460035 KDM6BO15054 1643 aa17.07■□□□□ 0.32
CCDC12-204ENST00000460035 NEO1Q92859 1461 aa17.06■□□□□ 0.32
CCDC12-204ENST00000460035 PLCH2O75038 1416 aa17.05■□□□□ 0.32
CCDC12-204ENST00000460035 PHLDB1Q86UU1 1377 aa17.03■□□□□ 0.32
CCDC12-204ENST00000460035 FANCAO15360 1455 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms