RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 NISCHQ9Y2I1 1504 aa26.15■■□□□ 1.78
CCDC12-204ENST00000460035 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
CCDC12-204ENST00000460035 ABCC9O60706 1549 aa22.43■■□□□ 1.18
CCDC12-204ENST00000460035 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.09
CCDC12-204ENST00000460035 NACADO15069 1562 aa21.78■■□□□ 1.08
CCDC12-204ENST00000460035 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
CCDC12-204ENST00000460035 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
CCDC12-204ENST00000460035 MYO15BQ96JP2 1530 aa21.73■■□□□ 1.07
CCDC12-204ENST00000460035 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.06
CCDC12-204ENST00000460035 UNC13AQ9UPW8 1703 aa21.4■■□□□ 1.02
CCDC12-204ENST00000460035 SCRIBQ14160 1630 aa21.15■□□□□ 0.98
CCDC12-204ENST00000460035 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
CCDC12-204ENST00000460035 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
CCDC12-204ENST00000460035 SHROOM4Q9ULL8 1493 aa20.91■□□□□ 0.94
CCDC12-204ENST00000460035 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
CCDC12-204ENST00000460035 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
CCDC12-204ENST00000460035 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
CCDC12-204ENST00000460035 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
CCDC12-204ENST00000460035 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
CCDC12-204ENST00000460035 BAZ1AQ9NRL2 1556 aaPredicted RBP20.27■□□□□ 0.84
CCDC12-204ENST00000460035 MROH2BQ7Z745 1585 aa20.13■□□□□ 0.81
CCDC12-204ENST00000460035 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
CCDC12-204ENST00000460035 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
CCDC12-204ENST00000460035 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
CCDC12-204ENST00000460035 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
CCDC12-204ENST00000460035 HMGXB3Q12766 1538 aa20.02■□□□□ 0.79
CCDC12-204ENST00000460035 WIZO95785 1651 aa19.97■□□□□ 0.79
CCDC12-204ENST00000460035 RSF1Q96T23 1441 aaPredicted RBP19.94■□□□□ 0.78
CCDC12-204ENST00000460035 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
CCDC12-204ENST00000460035 TOP2AP11388 1531 aaKnown RBP19.77■□□□□ 0.76
CCDC12-204ENST00000460035 SUPT5HO00267 1087 aaKnown RBP19.56■□□□□ 0.72
CCDC12-204ENST00000460035 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
CCDC12-204ENST00000460035 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
CCDC12-204ENST00000460035 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
CCDC12-204ENST00000460035 NESP48681 1621 aa19.47■□□□□ 0.71
CCDC12-204ENST00000460035 CADPSQ9ULU8 1353 aa19.43■□□□□ 0.7
CCDC12-204ENST00000460035 CFTRP13569 1480 aa19.39■□□□□ 0.69
CCDC12-204ENST00000460035 KIF21AQ7Z4S6 1674 aa19.38■□□□□ 0.69
CCDC12-204ENST00000460035 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
CCDC12-204ENST00000460035 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
CCDC12-204ENST00000460035 THOC2Q8NI27 1593 aaKnown RBP19.24■□□□□ 0.67
CCDC12-204ENST00000460035 FANCD2Q9BXW9 1451 aa19.22■□□□□ 0.67
CCDC12-204ENST00000460035 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
CCDC12-204ENST00000460035 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.65
CCDC12-204ENST00000460035 WDR62O43379 1518 aa19.1■□□□□ 0.65
CCDC12-204ENST00000460035 CUX2O14529 1486 aa19.1■□□□□ 0.65
CCDC12-204ENST00000460035 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
CCDC12-204ENST00000460035 DNMBPQ6XZF7 1577 aa19■□□□□ 0.63
CCDC12-204ENST00000460035 ABCC8Q09428 1581 aa18.99■□□□□ 0.63
CCDC12-204ENST00000460035 TOPBP1Q92547 1522 aa18.97■□□□□ 0.63
CCDC12-204ENST00000460035 CUX1P39880 1505 aa18.9■□□□□ 0.62
CCDC12-204ENST00000460035 BIVM-ERCC5R4GMW8 1640 aa18.85■□□□□ 0.61
CCDC12-204ENST00000460035 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
CCDC12-204ENST00000460035 WRNQ14191 1432 aaPredicted RBP eCLIP18.81■□□□□ 0.6
CCDC12-204ENST00000460035 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
CCDC12-204ENST00000460035 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
CCDC12-204ENST00000460035 IFT140Q96RY7 1462 aa18.79■□□□□ 0.6
CCDC12-204ENST00000460035 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
CCDC12-204ENST00000460035 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
CCDC12-204ENST00000460035 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
CCDC12-204ENST00000460035 SOGA1O94964 1423 aa18.69■□□□□ 0.58
CCDC12-204ENST00000460035 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
CCDC12-204ENST00000460035 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
CCDC12-204ENST00000460035 ZNF608Q9ULD9 1512 aaPredicted RBP18.67■□□□□ 0.58
CCDC12-204ENST00000460035 ABCA10Q8WWZ4 1543 aa18.64■□□□□ 0.57
CCDC12-204ENST00000460035 ABCA5Q8WWZ7 1642 aa18.6■□□□□ 0.57
CCDC12-204ENST00000460035 PBRM1Q86U86 1689 aa18.58■□□□□ 0.57
CCDC12-204ENST00000460035 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.562e-6■■□□□ 11.4
CCDC12-204ENST00000460035 TDRD9Q8NDG6 1382 aaKnown RBP18.54■□□□□ 0.56
CCDC12-204ENST00000460035 GAPVD1Q14C86 1478 aa18.51■□□□□ 0.55
CCDC12-204ENST00000460035 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
CCDC12-204ENST00000460035 CHD1O14646 1710 aa18.46■□□□□ 0.55
CCDC12-204ENST00000460035 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
CCDC12-204ENST00000460035 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
CCDC12-204ENST00000460035 ERICH3Q5RHP9 1530 aa18.44■□□□□ 0.54
CCDC12-204ENST00000460035 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
CCDC12-204ENST00000460035 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
CCDC12-204ENST00000460035 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
CCDC12-204ENST00000460035 CUL7Q14999 1698 aa18.35■□□□□ 0.53
CCDC12-204ENST00000460035 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
CCDC12-204ENST00000460035 CHIC1Q5VXU3 224 aa18.33■□□□□ 0.52
CCDC12-204ENST00000460035 FBLN2P98095 1184 aa18.32■□□□□ 0.52
CCDC12-204ENST00000460035 FHAD1B1AJZ9 1412 aa18.3■□□□□ 0.52
CCDC12-204ENST00000460035 IGF1RP08069 1367 aa18.28■□□□□ 0.52
CCDC12-204ENST00000460035 RUSC2Q8N2Y8 1516 aa18.27■□□□□ 0.51
CCDC12-204ENST00000460035 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
CCDC12-204ENST00000460035 OSCARQ8IYS5 282 aa18.25■□□□□ 0.51
CCDC12-204ENST00000460035 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
CCDC12-204ENST00000460035 DNAJC5Q9H3Z4 198 aa18.22■□□□□ 0.51
CCDC12-204ENST00000460035 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.51
CCDC12-204ENST00000460035 EEA1Q15075 1411 aa18.2■□□□□ 0.5
CCDC12-204ENST00000460035 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
CCDC12-204ENST00000460035 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
CCDC12-204ENST00000460035 NUP160Q12769 1436 aa18.17■□□□□ 0.5
CCDC12-204ENST00000460035 RAPGEF2Q9Y4G8 1499 aa18.12■□□□□ 0.49
CCDC12-204ENST00000460035 PRXQ9BXM0 1461 aa18.11■□□□□ 0.49
CCDC12-204ENST00000460035 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
CCDC12-204ENST00000460035 SHROOM2Q13796 1616 aa18.09■□□□□ 0.49
CCDC12-204ENST00000460035 CTTNBP2Q8WZ74 1663 aa18.09■□□□□ 0.49
CCDC12-204ENST00000460035 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms