RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 PRG4Q92954 1404 aaPredicted RBP26.81■■□□□ 1.88
SDF4-204ENST00000459994 JPH4Q96JJ6 628 aa26.77■■□□□ 1.88
SDF4-204ENST00000459994 CARMIL1Q5VZK9 1371 aa26.71■■□□□ 1.87
SDF4-204ENST00000459994 KIAA0586Q9BVV6 1533 aa26.7■■□□□ 1.87
SDF4-204ENST00000459994 KIF13AQ9H1H9 1805 aa26.6■■□□□ 1.85
SDF4-204ENST00000459994 ADCY10Q96PN6 1610 aa26.58■■□□□ 1.85
SDF4-204ENST00000459994 IQGAP2Q13576 1575 aa26.55■■□□□ 1.84
SDF4-204ENST00000459994 RAPGEF2Q9Y4G8 1499 aa26.51■■□□□ 1.83
SDF4-204ENST00000459994 CTTNBP2Q8WZ74 1663 aa26.46■■□□□ 1.83
SDF4-204ENST00000459994 DISP1Q96F81 1524 aa26.43■■□□□ 1.82
SDF4-204ENST00000459994 TTBK1Q5TCY1 1321 aaPredicted RBP26.4■■□□□ 1.82
SDF4-204ENST00000459994 MAPKBP1O60336 1514 aa26.39■■□□□ 1.81
SDF4-204ENST00000459994 UGGT2Q9NYU1 1516 aa26.38■■□□□ 1.81
SDF4-204ENST00000459994 PTPRGP23470 1445 aa26.37■■□□□ 1.81
SDF4-204ENST00000459994 CARMIL2Q6F5E8 1435 aa26.36■■□□□ 1.81
SDF4-204ENST00000459994 DIP2BQ9P265 1576 aa26.36■■□□□ 1.81
SDF4-204ENST00000459994 TNIKQ9UKE5 1360 aa26.35■■□□□ 1.81
SDF4-204ENST00000459994 KIAA0556O60303 1618 aa26.35■■□□□ 1.81
SDF4-204ENST00000459994 PRXQ9BXM0 1461 aa26.34■■□□□ 1.81
SDF4-204ENST00000459994 ABCC10Q5T3U5 1492 aa26.32■■□□□ 1.8
SDF4-204ENST00000459994 NPM1P06748 294 aaKnown RBP eCLIP26.28■■□□□ 1.8
SDF4-204ENST00000459994 TSPOAP1O95153 1857 aa26.28■■□□□ 1.8
SDF4-204ENST00000459994 ABCC2Q92887 1545 aa26.24■■□□□ 1.79
SDF4-204ENST00000459994 FAM69CQ0P6D2 419 aa26.24■■□□□ 1.79
SDF4-204ENST00000459994 UHRF1BP1LA0JNW5 1464 aa26.21■■□□□ 1.79
SDF4-204ENST00000459994 UACAQ9BZF9 1416 aa26.21■■□□□ 1.79
SDF4-204ENST00000459994 ZCCHC11Q5TAX3 1644 aaKnown RBP26.18■■□□□ 1.78
SDF4-204ENST00000459994 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
SDF4-204ENST00000459994 ASXL2Q76L83 1435 aa26.14■■□□□ 1.77
SDF4-204ENST00000459994 KDM5BQ9UGL1 1544 aa26.13■■□□□ 1.77
SDF4-204ENST00000459994 PPRC1Q5VV67 1664 aaKnown RBP26.12■■□□□ 1.77
SDF4-204ENST00000459994 CSRNP3Q8WYN3 585 aa26.12■■□□□ 1.77
SDF4-204ENST00000459994 PLB1Q6P1J6 1458 aa26.11■■□□□ 1.77
SDF4-204ENST00000459994 GOLGA3Q08378 1498 aa26.09■■□□□ 1.77
SDF4-204ENST00000459994 ABCA8O94911 1581 aa26.08■■□□□ 1.77
SDF4-204ENST00000459994 GLI2P10070 1586 aa26.05■■□□□ 1.76
SDF4-204ENST00000459994 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
SDF4-204ENST00000459994 EEA1Q15075 1411 aa26.03■■□□□ 1.76
SDF4-204ENST00000459994 SAMD9Q5K651 1589 aa26.03■■□□□ 1.76
SDF4-204ENST00000459994 KDM6BO15054 1643 aa26.03■■□□□ 1.76
SDF4-204ENST00000459994 MAP3K4Q9Y6R4 1608 aa26■■□□□ 1.75
SDF4-204ENST00000459994 EPRSP07814 1512 aaKnown RBP26■■□□□ 1.75
SDF4-204ENST00000459994 P3H3Q8IVL6 736 aa25.99■■□□□ 1.75
SDF4-204ENST00000459994 KIF21BO75037 1637 aa25.96■■□□□ 1.75
SDF4-204ENST00000459994 WDR7Q9Y4E6 1490 aa25.91■■□□□ 1.74
SDF4-204ENST00000459994 RANGAP1P46060 587 aaPredicted RBP25.88■■□□□ 1.73
SDF4-204ENST00000459994 RAPGEF6Q8TEU7 1601 aa25.87■■□□□ 1.73
SDF4-204ENST00000459994 ARID3CA6NKF2 412 aa25.85■■□□□ 1.73
SDF4-204ENST00000459994 FHOD3Q2V2M9 1422 aa25.82■■□□□ 1.72
SDF4-204ENST00000459994 EHMT2Q96KQ7 1210 aa25.82■■□□□ 1.72
SDF4-204ENST00000459994 ATP10BO94823 1461 aa25.82■■□□□ 1.72
SDF4-204ENST00000459994 COL17A1Q9UMD9 1497 aaPredicted RBP25.82■■□□□ 1.72
SDF4-204ENST00000459994 CFAP43Q8NDM7 1665 aa25.82■■□□□ 1.72
SDF4-204ENST00000459994 AEBP2Q6ZN18 517 aaPredicted RBP25.77■■□□□ 1.72
SDF4-204ENST00000459994 KCNH8Q96L42 1107 aa25.77■■□□□ 1.72
SDF4-204ENST00000459994 NUP153P49790 1475 aaKnown RBP25.73■■□□□ 1.71
SDF4-204ENST00000459994 TEX14Q8IWB6 1497 aa25.73■■□□□ 1.71
SDF4-204ENST00000459994 EFCAB5A4FU69 1503 aa25.72■■□□□ 1.71
SDF4-204ENST00000459994 CD109Q6YHK3 1445 aa25.71■■□□□ 1.71
SDF4-204ENST00000459994 MAGI3Q5TCQ9 1506 aa25.68■■□□□ 1.7
SDF4-204ENST00000459994 ABCA9Q8IUA7 1624 aa25.67■■□□□ 1.7
SDF4-204ENST00000459994 KDM4FA0A1W2PPD8 638 aa25.62■■□□□ 1.69
SDF4-204ENST00000459994 UBTFP17480 764 aaKnown RBP25.62■■□□□ 1.69
SDF4-204ENST00000459994 ARHGAP35Q9NRY4 1499 aa25.6■■□□□ 1.69
SDF4-204ENST00000459994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.57■■□□□ 1.68
SDF4-204ENST00000459994 HNRNPUL2Q1KMD3 747 aaKnown RBP25.57■■□□□ 1.68
SDF4-204ENST00000459994 CDK13Q14004 1512 aaKnown RBP25.57■■□□□ 1.68
SDF4-204ENST00000459994 LRRIQ1Q96JM4 1722 aa25.56■■□□□ 1.68
SDF4-204ENST00000459994 TTC37Q6PGP7 1564 aa25.49■■□□□ 1.67
SDF4-204ENST00000459994 ADGRL1O94910 1474 aa25.49■■□□□ 1.67
SDF4-204ENST00000459994 ARAP3Q8WWN8 1544 aa25.48■■□□□ 1.67
SDF4-204ENST00000459994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.67
SDF4-204ENST00000459994 HECW1Q76N89 1606 aa25.47■■□□□ 1.67
SDF4-204ENST00000459994 FRMPD1Q5SYB0 1578 aa25.44■■□□□ 1.66
SDF4-204ENST00000459994 PLEKHD1A6NEE1 506 aa25.42■■□□□ 1.66
SDF4-204ENST00000459994 FMN1Q68DA7 1419 aa25.42■■□□□ 1.66
SDF4-204ENST00000459994 NEO1Q92859 1461 aa25.4■■□□□ 1.66
SDF4-204ENST00000459994 ATP1B4Q9UN42 357 aaPredicted RBP25.38■■□□□ 1.65
SDF4-204ENST00000459994 PCF11O94913 1555 aaKnown RBP25.38■■□□□ 1.65
SDF4-204ENST00000459994 KIF14Q15058 1648 aa25.37■■□□□ 1.65
SDF4-204ENST00000459994 RICTORQ6R327 1708 aa25.37■■□□□ 1.65
SDF4-204ENST00000459994 RAPGEF3O95398 923 aa25.35■■□□□ 1.65
SDF4-204ENST00000459994 CFAP74Q9C0B2 1584 aa25.32■■□□□ 1.64
SDF4-204ENST00000459994 MYO5CQ9NQX4 1742 aa25.32■■□□□ 1.64
SDF4-204ENST00000459994 PHLDB1Q86UU1 1377 aa25.31■■□□□ 1.64
SDF4-204ENST00000459994 FANCAO15360 1455 aa25.31■■□□□ 1.64
SDF4-204ENST00000459994 AKNAQ7Z591 1439 aa25.29■■□□□ 1.64
SDF4-204ENST00000459994 SIGLEC1Q9BZZ2 1709 aa25.23■■□□□ 1.63
SDF4-204ENST00000459994 CASKIN1Q8WXD9 1431 aa25.23■■□□□ 1.63
SDF4-204ENST00000459994 DENND4BO75064 1496 aaPredicted RBP25.22■■□□□ 1.63
SDF4-204ENST00000459994 PLCH2O75038 1416 aa25.22■■□□□ 1.63
SDF4-204ENST00000459994 CLIP1P30622 1438 aa25.22■■□□□ 1.63
SDF4-204ENST00000459994 TROQ12816 1431 aaPredicted RBP25.22■■□□□ 1.63
SDF4-204ENST00000459994 CDC42BPBQ9Y5S2 1711 aa25.22■■□□□ 1.63
SDF4-204ENST00000459994 ARHGEF40Q8TER5 1519 aa25.21■■□□□ 1.63
SDF4-204ENST00000459994 ADAMTSL3P82987 1691 aa25.2■■□□□ 1.62
SDF4-204ENST00000459994 BCORL1Q5H9F3 1711 aa25.18■■□□□ 1.62
SDF4-204ENST00000459994 ZMYM4Q5VZL5 1548 aa25.17■■□□□ 1.62
SDF4-204ENST00000459994 CCDC18Q5T9S5 1454 aa25.15■■□□□ 1.62
SDF4-204ENST00000459994 FYCO1Q9BQS8 1478 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms