RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.05
COL18A1-206ENST00000459895 ARHGEF11O15085 1522 aa21.58■■□□□ 1.04
COL18A1-206ENST00000459895 KIF21BO75037 1637 aa21.55■■□□□ 1.04
COL18A1-206ENST00000459895 IQGAP2Q13576 1575 aa21.51■■□□□ 1.03
COL18A1-206ENST00000459895 ERCC6L2Q5T890 1561 aa21.5■■□□□ 1.03
COL18A1-206ENST00000459895 KIAA0586Q9BVV6 1533 aa21.47■■□□□ 1.03
COL18A1-206ENST00000459895 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
COL18A1-206ENST00000459895 ARAP1Q96P48 1450 aa21.43■■□□□ 1.02
COL18A1-206ENST00000459895 CSRNP3Q8WYN3 585 aa21.42■■□□□ 1.02
COL18A1-206ENST00000459895 UGGT2Q9NYU1 1516 aa21.35■■□□□ 1.01
COL18A1-206ENST00000459895 GOLGA3Q08378 1498 aa21.35■■□□□ 1.01
COL18A1-206ENST00000459895 PRG4Q92954 1404 aaPredicted RBP21.35■■□□□ 1.01
COL18A1-206ENST00000459895 KIAA0556O60303 1618 aa21.34■■□□□ 1.01
COL18A1-206ENST00000459895 DISP1Q96F81 1524 aa21.29■■□□□ 1
COL18A1-206ENST00000459895 SAMD9Q5K651 1589 aa21.27■■□□□ 1
COL18A1-206ENST00000459895 JPH4Q96JJ6 628 aa21.25■□□□□ 0.99
COL18A1-206ENST00000459895 CARMIL2Q6F5E8 1435 aa21.19■□□□□ 0.98
COL18A1-206ENST00000459895 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
COL18A1-206ENST00000459895 ADCY10Q96PN6 1610 aa21.17■□□□□ 0.98
COL18A1-206ENST00000459895 EFCAB5A4FU69 1503 aa21.16■□□□□ 0.98
COL18A1-206ENST00000459895 TNIKQ9UKE5 1360 aa21.11■□□□□ 0.97
COL18A1-206ENST00000459895 CYB5RLQ6IPT4 315 aa21.11■□□□□ 0.97
COL18A1-206ENST00000459895 ABCC2Q92887 1545 aa21.05■□□□□ 0.96
COL18A1-206ENST00000459895 UBTFP17480 764 aaKnown RBP21.05■□□□□ 0.96
COL18A1-206ENST00000459895 ABCA8O94911 1581 aa21.05■□□□□ 0.96
COL18A1-206ENST00000459895 PTPRGP23470 1445 aa21.04■□□□□ 0.96
COL18A1-206ENST00000459895 FHOD3Q2V2M9 1422 aa21.04■□□□□ 0.96
COL18A1-206ENST00000459895 ARHGAP35Q9NRY4 1499 aa21.04■□□□□ 0.96
COL18A1-206ENST00000459895 PLB1Q6P1J6 1458 aa21.01■□□□□ 0.95
COL18A1-206ENST00000459895 RAPGEF6Q8TEU7 1601 aa21■□□□□ 0.95
COL18A1-206ENST00000459895 UHRF1BP1LA0JNW5 1464 aa21■□□□□ 0.95
COL18A1-206ENST00000459895 RANGAP1P46060 587 aaPredicted RBP20.99■□□□□ 0.95
COL18A1-206ENST00000459895 ZCCHC11Q5TAX3 1644 aaKnown RBP20.99■□□□□ 0.95
COL18A1-206ENST00000459895 TTBK1Q5TCY1 1321 aaPredicted RBP20.99■□□□□ 0.95
COL18A1-206ENST00000459895 UACAQ9BZF9 1416 aa20.97■□□□□ 0.95
COL18A1-206ENST00000459895 MAPKBP1O60336 1514 aa20.94■□□□□ 0.94
COL18A1-206ENST00000459895 P3H3Q8IVL6 736 aa20.94■□□□□ 0.94
COL18A1-206ENST00000459895 PCF11O94913 1555 aaKnown RBP20.93■□□□□ 0.94
COL18A1-206ENST00000459895 CLIP1P30622 1438 aa20.92■□□□□ 0.94
COL18A1-206ENST00000459895 CEP162Q5TB80 1403 aa20.91■□□□□ 0.94
COL18A1-206ENST00000459895 KDM5BQ9UGL1 1544 aa20.9■□□□□ 0.94
COL18A1-206ENST00000459895 HECW1Q76N89 1606 aa20.89■□□□□ 0.93
COL18A1-206ENST00000459895 LRRIQ1Q96JM4 1722 aa20.88■□□□□ 0.93
COL18A1-206ENST00000459895 KIF13AQ9H1H9 1805 aa20.88■□□□□ 0.93
COL18A1-206ENST00000459895 NUP153P49790 1475 aaKnown RBP20.87■□□□□ 0.93
COL18A1-206ENST00000459895 DIP2BQ9P265 1576 aa20.85■□□□□ 0.93
COL18A1-206ENST00000459895 FMN1Q68DA7 1419 aa20.84■□□□□ 0.93
COL18A1-206ENST00000459895 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
COL18A1-206ENST00000459895 CDK13Q14004 1512 aaKnown RBP20.78■□□□□ 0.92
COL18A1-206ENST00000459895 ASXL2Q76L83 1435 aa20.78■□□□□ 0.92
COL18A1-206ENST00000459895 FYCO1Q9BQS8 1478 aa20.76■□□□□ 0.91
COL18A1-206ENST00000459895 ATP10BO94823 1461 aa20.75■□□□□ 0.91
COL18A1-206ENST00000459895 WDR7Q9Y4E6 1490 aa20.75■□□□□ 0.91
COL18A1-206ENST00000459895 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
COL18A1-206ENST00000459895 EPRSP07814 1512 aaKnown RBP20.73■□□□□ 0.91
COL18A1-206ENST00000459895 CASKIN1Q8WXD9 1431 aa20.72■□□□□ 0.91
COL18A1-206ENST00000459895 NPM1P06748 294 aaKnown RBP eCLIP20.71■□□□□ 0.91
COL18A1-206ENST00000459895 ARID3CA6NKF2 412 aa20.7■□□□□ 0.9
COL18A1-206ENST00000459895 CFAP43Q8NDM7 1665 aa20.7■□□□□ 0.9
COL18A1-206ENST00000459895 GLI2P10070 1586 aa20.69■□□□□ 0.9
COL18A1-206ENST00000459895 MAP3K4Q9Y6R4 1608 aa20.69■□□□□ 0.9
COL18A1-206ENST00000459895 CCDC18Q5T9S5 1454 aa20.67■□□□□ 0.9
COL18A1-206ENST00000459895 PPRC1Q5VV67 1664 aaKnown RBP20.67■□□□□ 0.9
COL18A1-206ENST00000459895 VPS8Q8N3P4 1428 aa20.63■□□□□ 0.89
COL18A1-206ENST00000459895 TSPOAP1O95153 1857 aa20.63■□□□□ 0.89
COL18A1-206ENST00000459895 ABCA9Q8IUA7 1624 aa20.63■□□□□ 0.89
COL18A1-206ENST00000459895 MAGI3Q5TCQ9 1506 aa20.62■□□□□ 0.89
COL18A1-206ENST00000459895 KIF14Q15058 1648 aa20.61■□□□□ 0.89
COL18A1-206ENST00000459895 TTC37Q6PGP7 1564 aa20.61■□□□□ 0.89
COL18A1-206ENST00000459895 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
COL18A1-206ENST00000459895 TIAM1Q13009 1591 aa20.55■□□□□ 0.88
COL18A1-206ENST00000459895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.54■□□□□ 0.88
COL18A1-206ENST00000459895 ATP1B4Q9UN42 357 aaPredicted RBP20.54■□□□□ 0.88
COL18A1-206ENST00000459895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.53■□□□□ 0.88
COL18A1-206ENST00000459895 FAM69CQ0P6D2 419 aa20.53■□□□□ 0.88
COL18A1-206ENST00000459895 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
COL18A1-206ENST00000459895 EHBP1L1Q8N3D4 1523 aa20.52■□□□□ 0.87
COL18A1-206ENST00000459895 TROQ12816 1431 aaPredicted RBP20.52■□□□□ 0.87
COL18A1-206ENST00000459895 MYO5CQ9NQX4 1742 aa20.51■□□□□ 0.87
COL18A1-206ENST00000459895 PREX2Q70Z35 1606 aa20.46■□□□□ 0.87
COL18A1-206ENST00000459895 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
COL18A1-206ENST00000459895 CFAP74Q9C0B2 1584 aa20.44■□□□□ 0.86
COL18A1-206ENST00000459895 KDM6BO15054 1643 aa20.44■□□□□ 0.86
COL18A1-206ENST00000459895 TEX14Q8IWB6 1497 aa20.43■□□□□ 0.86
COL18A1-206ENST00000459895 KCNH8Q96L42 1107 aa20.43■□□□□ 0.86
COL18A1-206ENST00000459895 CD109Q6YHK3 1445 aa20.43■□□□□ 0.86
COL18A1-206ENST00000459895 MAP3K1Q13233 1512 aa20.43■□□□□ 0.86
COL18A1-206ENST00000459895 SUPT6HQ7KZ85 1726 aaKnown RBP20.41■□□□□ 0.86
COL18A1-206ENST00000459895 PLEKHD1A6NEE1 506 aa20.41■□□□□ 0.86
COL18A1-206ENST00000459895 CDC42BPBQ9Y5S2 1711 aa20.4■□□□□ 0.86
COL18A1-206ENST00000459895 ITSN2Q9NZM3 1697 aa20.38■□□□□ 0.85
COL18A1-206ENST00000459895 ARAP3Q8WWN8 1544 aa20.38■□□□□ 0.85
COL18A1-206ENST00000459895 LRRC9Q6ZRR7 1453 aa20.37■□□□□ 0.85
COL18A1-206ENST00000459895 MTUS2Q5JR59 1369 aa20.37■□□□□ 0.85
COL18A1-206ENST00000459895 CDK11AQ9UQ88 783 aaPredicted RBP20.37■□□□□ 0.85
COL18A1-206ENST00000459895 FRMPD1Q5SYB0 1578 aa20.34■□□□□ 0.85
COL18A1-206ENST00000459895 ARHGAP5Q13017 1502 aa20.33■□□□□ 0.85
COL18A1-206ENST00000459895 FANCAO15360 1455 aa20.33■□□□□ 0.85
COL18A1-206ENST00000459895 NEO1Q92859 1461 aa20.32■□□□□ 0.84
COL18A1-206ENST00000459895 NCOA2Q15596 1464 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms