RNA–Protein interactions for RNA: ENST00000459809.5

PHF1-206, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-206ENST00000459809 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
PHF1-206ENST00000459809 KIAA0586Q9BVV6 1533 aa22.36■■□□□ 1.17
PHF1-206ENST00000459809 CUL7Q14999 1698 aa22.36■■□□□ 1.17
PHF1-206ENST00000459809 RUSC2Q8N2Y8 1516 aa22.29■■□□□ 1.16
PHF1-206ENST00000459809 NPM1P06748 294 aaKnown RBP eCLIP22.22■■□□□ 1.15
PHF1-206ENST00000459809 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.14
PHF1-206ENST00000459809 CARMIL2Q6F5E8 1435 aa22.16■■□□□ 1.14
PHF1-206ENST00000459809 PTPRGP23470 1445 aa22.14■■□□□ 1.13
PHF1-206ENST00000459809 TNIKQ9UKE5 1360 aa22.11■■□□□ 1.13
PHF1-206ENST00000459809 IQGAP2Q13576 1575 aa22.08■■□□□ 1.13
PHF1-206ENST00000459809 CSRNP3Q8WYN3 585 aa22.03■■□□□ 1.12
PHF1-206ENST00000459809 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
PHF1-206ENST00000459809 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
PHF1-206ENST00000459809 FAM69CQ0P6D2 419 aa22.01■■□□□ 1.11
PHF1-206ENST00000459809 UGGT2Q9NYU1 1516 aa22.01■■□□□ 1.11
PHF1-206ENST00000459809 DISP1Q96F81 1524 aa22■■□□□ 1.11
PHF1-206ENST00000459809 ADCY10Q96PN6 1610 aa21.99■■□□□ 1.11
PHF1-206ENST00000459809 MAPKBP1O60336 1514 aa21.99■■□□□ 1.11
PHF1-206ENST00000459809 ABCC10Q5T3U5 1492 aa21.97■■□□□ 1.11
PHF1-206ENST00000459809 UACAQ9BZF9 1416 aa21.95■■□□□ 1.1
PHF1-206ENST00000459809 UHRF1BP1LA0JNW5 1464 aa21.95■■□□□ 1.1
PHF1-206ENST00000459809 EEA1Q15075 1411 aa21.93■■□□□ 1.1
PHF1-206ENST00000459809 ABCC2Q92887 1545 aa21.92■■□□□ 1.1
PHF1-206ENST00000459809 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
PHF1-206ENST00000459809 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
PHF1-206ENST00000459809 PLB1Q6P1J6 1458 aa21.85■■□□□ 1.09
PHF1-206ENST00000459809 KIAA0556O60303 1618 aa21.85■■□□□ 1.09
PHF1-206ENST00000459809 KIF13AQ9H1H9 1805 aa21.83■■□□□ 1.09
PHF1-206ENST00000459809 ASXL2Q76L83 1435 aa21.83■■□□□ 1.09
PHF1-206ENST00000459809 DIP2BQ9P265 1576 aa21.82■■□□□ 1.08
PHF1-206ENST00000459809 KDM5BQ9UGL1 1544 aa21.81■■□□□ 1.08
PHF1-206ENST00000459809 CTTNBP2Q8WZ74 1663 aa21.8■■□□□ 1.08
PHF1-206ENST00000459809 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
PHF1-206ENST00000459809 P3H3Q8IVL6 736 aa21.74■■□□□ 1.07
PHF1-206ENST00000459809 GLI2P10070 1586 aa21.71■■□□□ 1.07
PHF1-206ENST00000459809 EPRSP07814 1512 aaKnown RBP21.68■■□□□ 1.06
PHF1-206ENST00000459809 ABCA8O94911 1581 aa21.68■■□□□ 1.06
PHF1-206ENST00000459809 AEBP2Q6ZN18 517 aaPredicted RBP21.66■■□□□ 1.06
PHF1-206ENST00000459809 ZCCHC11Q5TAX3 1644 aaKnown RBP21.65■■□□□ 1.06
PHF1-206ENST00000459809 WDR7Q9Y4E6 1490 aa21.64■■□□□ 1.05
PHF1-206ENST00000459809 RANGAP1P46060 587 aaPredicted RBP21.62■■□□□ 1.05
PHF1-206ENST00000459809 KCNH8Q96L42 1107 aa21.62■■□□□ 1.05
PHF1-206ENST00000459809 UBTFP17480 764 aaKnown RBP21.6■■□□□ 1.05
PHF1-206ENST00000459809 SAMD9Q5K651 1589 aa21.6■■□□□ 1.05
PHF1-206ENST00000459809 KIF21BO75037 1637 aa21.59■■□□□ 1.05
PHF1-206ENST00000459809 ATP10BO94823 1461 aa21.58■■□□□ 1.04
PHF1-206ENST00000459809 KDM6BO15054 1643 aa21.57■■□□□ 1.04
PHF1-206ENST00000459809 TEX14Q8IWB6 1497 aa21.57■■□□□ 1.04
PHF1-206ENST00000459809 TSPOAP1O95153 1857 aa21.56■■□□□ 1.04
PHF1-206ENST00000459809 ARID3CA6NKF2 412 aa21.54■■□□□ 1.04
PHF1-206ENST00000459809 CD109Q6YHK3 1445 aa21.54■■□□□ 1.04
PHF1-206ENST00000459809 MAP3K4Q9Y6R4 1608 aa21.52■■□□□ 1.04
PHF1-206ENST00000459809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.52■■□□□ 1.04
PHF1-206ENST00000459809 HNRNPUL2Q1KMD3 747 aaKnown RBP21.52■■□□□ 1.04
PHF1-206ENST00000459809 FHOD3Q2V2M9 1422 aa21.51■■□□□ 1.03
PHF1-206ENST00000459809 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
PHF1-206ENST00000459809 EFCAB5A4FU69 1503 aa21.49■■□□□ 1.03
PHF1-206ENST00000459809 MAGI3Q5TCQ9 1506 aa21.49■■□□□ 1.03
PHF1-206ENST00000459809 PPRC1Q5VV67 1664 aaKnown RBP21.48■■□□□ 1.03
PHF1-206ENST00000459809 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
PHF1-206ENST00000459809 RAPGEF6Q8TEU7 1601 aa21.46■■□□□ 1.03
PHF1-206ENST00000459809 COL17A1Q9UMD9 1497 aaPredicted RBP21.45■■□□□ 1.03
PHF1-206ENST00000459809 NUP153P49790 1475 aaKnown RBP21.44■■□□□ 1.02
PHF1-206ENST00000459809 CFAP43Q8NDM7 1665 aa21.41■■□□□ 1.02
PHF1-206ENST00000459809 PHLDB1Q86UU1 1377 aa21.41■■□□□ 1.02
PHF1-206ENST00000459809 KDM4FA0A1W2PPD8 638 aa21.38■■□□□ 1.01
PHF1-206ENST00000459809 FMN1Q68DA7 1419 aa21.38■■□□□ 1.01
PHF1-206ENST00000459809 ARHGAP35Q9NRY4 1499 aa21.33■■□□□ 1.01
PHF1-206ENST00000459809 CDK11AQ9UQ88 783 aaPredicted RBP21.33■■□□□ 1.01
PHF1-206ENST00000459809 ATP1B4Q9UN42 357 aaPredicted RBP21.32■■□□□ 1
PHF1-206ENST00000459809 ARAP3Q8WWN8 1544 aa21.32■■□□□ 1
PHF1-206ENST00000459809 ABCA9Q8IUA7 1624 aa21.32■■□□□ 1
PHF1-206ENST00000459809 NEO1Q92859 1461 aa21.28■■□□□ 1
PHF1-206ENST00000459809 RAPGEF3O95398 923 aa21.22■□□□□ 0.99
PHF1-206ENST00000459809 CDK13Q14004 1512 aaKnown RBP21.2■□□□□ 0.98
PHF1-206ENST00000459809 HECW1Q76N89 1606 aa21.18■□□□□ 0.98
PHF1-206ENST00000459809 ADGRL1O94910 1474 aa21.18■□□□□ 0.98
PHF1-206ENST00000459809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.18■□□□□ 0.982e-7■■■■□ 20
PHF1-206ENST00000459809 AKNAQ7Z591 1439 aa21.17■□□□□ 0.98
PHF1-206ENST00000459809 FANCAO15360 1455 aa21.15■□□□□ 0.98
PHF1-206ENST00000459809 PLCH2O75038 1416 aa21.15■□□□□ 0.98
PHF1-206ENST00000459809 CASKIN1Q8WXD9 1431 aa21.15■□□□□ 0.98
PHF1-206ENST00000459809 CLIP1P30622 1438 aa21.14■□□□□ 0.98
PHF1-206ENST00000459809 EFCAB2Q5VUJ9 269 aa21.14■□□□□ 0.97
PHF1-206ENST00000459809 DENND4BO75064 1496 aaPredicted RBP21.13■□□□□ 0.97
PHF1-206ENST00000459809 TROQ12816 1431 aaPredicted RBP21.12■□□□□ 0.97
PHF1-206ENST00000459809 CCDC18Q5T9S5 1454 aa21.07■□□□□ 0.96
PHF1-206ENST00000459809 TTC37Q6PGP7 1564 aa21.07■□□□□ 0.96
PHF1-206ENST00000459809 CFAP74Q9C0B2 1584 aa21.06■□□□□ 0.96
PHF1-206ENST00000459809 SCAPERQ9BY12 1400 aa21.04■□□□□ 0.96
PHF1-206ENST00000459809 FYCO1Q9BQS8 1478 aa21.03■□□□□ 0.96
PHF1-206ENST00000459809 ARID4BQ4LE39 1312 aaPredicted RBP21.03■□□□□ 0.96
PHF1-206ENST00000459809 MAGI2Q86UL8 1455 aa21.01■□□□□ 0.95
PHF1-206ENST00000459809 KIF14Q15058 1648 aa21■□□□□ 0.95
PHF1-206ENST00000459809 FRMPD1Q5SYB0 1578 aa21■□□□□ 0.95
PHF1-206ENST00000459809 PCF11O94913 1555 aaKnown RBP20.98■□□□□ 0.95
PHF1-206ENST00000459809 POGZQ7Z3K3 1410 aa20.96■□□□□ 0.95
PHF1-206ENST00000459809 ZMYM4Q5VZL5 1548 aa20.94■□□□□ 0.94
PHF1-206ENST00000459809 RICTORQ6R327 1708 aa20.94■□□□□ 0.94
PHF1-206ENST00000459809 ARHGAP5Q13017 1502 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms