RNA–Protein interactions for RNA: ENST00000459809.5

PHF1-206, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-206ENST00000459809 NISCHQ9Y2I1 1504 aa32.13■■■□□ 2.73
PHF1-206ENST00000459809 CCDC180Q9P1Z9 1646 aa28.61■■■□□ 2.17
PHF1-206ENST00000459809 ABCC9O60706 1549 aa28.38■■■□□ 2.13
PHF1-206ENST00000459809 RB1CC1Q8TDY2 1594 aa27.17■■□□□ 1.94
PHF1-206ENST00000459809 DCAF8L2P0C7V8 631 aa27.11■■□□□ 1.93
PHF1-206ENST00000459809 NACADO15069 1562 aa27.09■■□□□ 1.93
PHF1-206ENST00000459809 MYO15BQ96JP2 1530 aa26.86■■□□□ 1.89
PHF1-206ENST00000459809 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
PHF1-206ENST00000459809 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
PHF1-206ENST00000459809 PABPN1Q86U42 306 aaKnown RBP eCLIP26.56■■□□□ 1.84
PHF1-206ENST00000459809 DNAJC5BQ9UF47 199 aa26.45■■□□□ 1.82
PHF1-206ENST00000459809 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
PHF1-206ENST00000459809 BICRAQ9NZM4 1560 aa26.3■■□□□ 1.8
PHF1-206ENST00000459809 SHROOM4Q9ULL8 1493 aa26.11■■□□□ 1.77
PHF1-206ENST00000459809 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
PHF1-206ENST00000459809 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
PHF1-206ENST00000459809 CC2D2AQ9P2K1 1620 aa25.62■■□□□ 1.69
PHF1-206ENST00000459809 CECR2Q9BXF3 1484 aa25.59■■□□□ 1.69
PHF1-206ENST00000459809 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
PHF1-206ENST00000459809 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
PHF1-206ENST00000459809 SMARCA4P51532 1647 aa24.92■■□□□ 1.58
PHF1-206ENST00000459809 BAZ1AQ9NRL2 1556 aaPredicted RBP24.92■■□□□ 1.58
PHF1-206ENST00000459809 SMARCA2P51531 1590 aa24.91■■□□□ 1.58
PHF1-206ENST00000459809 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
PHF1-206ENST00000459809 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
PHF1-206ENST00000459809 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
PHF1-206ENST00000459809 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
PHF1-206ENST00000459809 ERCC6Q03468 1493 aa24.53■■□□□ 1.52
PHF1-206ENST00000459809 NESP48681 1621 aa24.45■■□□□ 1.5
PHF1-206ENST00000459809 CUX2O14529 1486 aa24.41■■□□□ 1.5
PHF1-206ENST00000459809 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
PHF1-206ENST00000459809 WIZO95785 1651 aa24.37■■□□□ 1.49
PHF1-206ENST00000459809 LAMC3Q9Y6N6 1575 aa24.36■■□□□ 1.49
PHF1-206ENST00000459809 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
PHF1-206ENST00000459809 PDS5BQ9NTI5 1447 aa24.32■■□□□ 1.48
PHF1-206ENST00000459809 DNAJC5Q9H3Z4 198 aa24.17■■□□□ 1.46
PHF1-206ENST00000459809 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
PHF1-206ENST00000459809 THOC2Q8NI27 1593 aaKnown RBP24.07■■□□□ 1.44
PHF1-206ENST00000459809 CFTRP13569 1480 aa24.07■■□□□ 1.44
PHF1-206ENST00000459809 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
PHF1-206ENST00000459809 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
PHF1-206ENST00000459809 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
PHF1-206ENST00000459809 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
PHF1-206ENST00000459809 CCDC88BA6NC98 1476 aa23.93■■□□□ 1.42
PHF1-206ENST00000459809 WDR62O43379 1518 aa23.89■■□□□ 1.42
PHF1-206ENST00000459809 URB2Q14146 1524 aaKnown RBP23.71■■□□□ 1.39
PHF1-206ENST00000459809 PRDM2Q13029 1718 aa23.61■■□□□ 1.37
PHF1-206ENST00000459809 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
PHF1-206ENST00000459809 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
PHF1-206ENST00000459809 TOPBP1Q92547 1522 aa23.53■■□□□ 1.36
PHF1-206ENST00000459809 IFT140Q96RY7 1462 aa23.51■■□□□ 1.35
PHF1-206ENST00000459809 OSCARQ8IYS5 282 aa23.48■■□□□ 1.35
PHF1-206ENST00000459809 DNMBPQ6XZF7 1577 aa23.44■■□□□ 1.34
PHF1-206ENST00000459809 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
PHF1-206ENST00000459809 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
PHF1-206ENST00000459809 SOGA1O94964 1423 aa23.29■■□□□ 1.32
PHF1-206ENST00000459809 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.314e-6■■□□□ 14
PHF1-206ENST00000459809 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
PHF1-206ENST00000459809 RAD54L2Q9Y4B4 1467 aa23.21■■□□□ 1.31
PHF1-206ENST00000459809 CUX1P39880 1505 aa23.2■■□□□ 1.3
PHF1-206ENST00000459809 FGD5Q6ZNL6 1462 aa23.19■■□□□ 1.3
PHF1-206ENST00000459809 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
PHF1-206ENST00000459809 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
PHF1-206ENST00000459809 TRIM41Q8WV44 630 aa23.15■■□□□ 1.3
PHF1-206ENST00000459809 FBLN2P98095 1184 aa23.11■■□□□ 1.29
PHF1-206ENST00000459809 WDR97A6NE52 1622 aa23.09■■□□□ 1.29
PHF1-206ENST00000459809 CHMP7Q8WUX9 453 aaPredicted RBP23.03■■□□□ 1.28
PHF1-206ENST00000459809 GRIN2BQ13224 1484 aa23.03■■□□□ 1.28
PHF1-206ENST00000459809 WRNQ14191 1432 aaPredicted RBP eCLIP23.01■■□□□ 1.27
PHF1-206ENST00000459809 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
PHF1-206ENST00000459809 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
PHF1-206ENST00000459809 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
PHF1-206ENST00000459809 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
PHF1-206ENST00000459809 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
PHF1-206ENST00000459809 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
PHF1-206ENST00000459809 SYNJ2O15056 1496 aa22.91■■□□□ 1.26
PHF1-206ENST00000459809 CHD1O14646 1710 aa22.9■■□□□ 1.26
PHF1-206ENST00000459809 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
PHF1-206ENST00000459809 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
PHF1-206ENST00000459809 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
PHF1-206ENST00000459809 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
PHF1-206ENST00000459809 CYB5RLQ6IPT4 315 aa22.85■■□□□ 1.25
PHF1-206ENST00000459809 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
PHF1-206ENST00000459809 ABCA5Q8WWZ7 1642 aa22.82■■□□□ 1.24
PHF1-206ENST00000459809 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
PHF1-206ENST00000459809 PBRM1Q86U86 1689 aa22.75■■□□□ 1.23
PHF1-206ENST00000459809 FHAD1B1AJZ9 1412 aa22.73■■□□□ 1.23
PHF1-206ENST00000459809 ERICH3Q5RHP9 1530 aa22.7■■□□□ 1.22
PHF1-206ENST00000459809 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
PHF1-206ENST00000459809 ARAP1Q96P48 1450 aa22.69■■□□□ 1.22
PHF1-206ENST00000459809 NUP160Q12769 1436 aa22.63■■□□□ 1.21
PHF1-206ENST00000459809 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
PHF1-206ENST00000459809 KIF27Q86VH2 1401 aa22.58■■□□□ 1.21
PHF1-206ENST00000459809 IGF1RP08069 1367 aa22.56■■□□□ 1.2
PHF1-206ENST00000459809 CEP170Q5SW79 1584 aa22.52■■□□□ 1.2
PHF1-206ENST00000459809 JPH4Q96JJ6 628 aa22.51■■□□□ 1.19
PHF1-206ENST00000459809 TRHP20396 242 aaPredicted RBP22.5■■□□□ 1.19
PHF1-206ENST00000459809 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
PHF1-206ENST00000459809 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
PHF1-206ENST00000459809 SHROOM2Q13796 1616 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms