RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 IGF1RP08069 1367 aa32.72■■■□□ 2.83
HDAC11-216ENST00000458642 AEBP2Q6ZN18 517 aaPredicted RBP32.69■■■□□ 2.82
HDAC11-216ENST00000458642 KIF27Q86VH2 1401 aa32.67■■■□□ 2.82
HDAC11-216ENST00000458642 CUL7Q14999 1698 aa32.64■■■□□ 2.82
HDAC11-216ENST00000458642 ADCY10Q96PN6 1610 aa32.64■■■□□ 2.82
HDAC11-216ENST00000458642 KIAA0586Q9BVV6 1533 aa32.63■■■□□ 2.81
HDAC11-216ENST00000458642 ABCC10Q5T3U5 1492 aa32.55■■■□□ 2.8
HDAC11-216ENST00000458642 MAPKBP1O60336 1514 aa32.55■■■□□ 2.8
HDAC11-216ENST00000458642 FAM69CQ0P6D2 419 aa32.54■■■□□ 2.8
HDAC11-216ENST00000458642 DIP2BQ9P265 1576 aa32.52■■■□□ 2.8
HDAC11-216ENST00000458642 NPM1P06748 294 aaKnown RBP eCLIP32.51■■■□□ 2.79
HDAC11-216ENST00000458642 CARMIL1Q5VZK9 1371 aa32.48■■■□□ 2.79
HDAC11-216ENST00000458642 TTBK1Q5TCY1 1321 aaPredicted RBP32.42■■■□□ 2.78
HDAC11-216ENST00000458642 PTPRGP23470 1445 aa32.37■■■□□ 2.77
HDAC11-216ENST00000458642 IQGAP2Q13576 1575 aa32.33■■■□□ 2.77
HDAC11-216ENST00000458642 TSPOAP1O95153 1857 aa32.33■■■□□ 2.77
HDAC11-216ENST00000458642 TNIKQ9UKE5 1360 aa32.29■■■□□ 2.76
HDAC11-216ENST00000458642 CARMIL2Q6F5E8 1435 aa32.27■■■□□ 2.76
HDAC11-216ENST00000458642 KDM6BO15054 1643 aa32.26■■■□□ 2.75
HDAC11-216ENST00000458642 ABCC2Q92887 1545 aa32.24■■■□□ 2.75
HDAC11-216ENST00000458642 DISP1Q96F81 1524 aa32.24■■■□□ 2.75
HDAC11-216ENST00000458642 ASXL2Q76L83 1435 aa32.17■■■□□ 2.74
HDAC11-216ENST00000458642 RAPGEF2Q9Y4G8 1499 aa32.16■■■□□ 2.74
HDAC11-216ENST00000458642 UHRF1BP1LA0JNW5 1464 aa32.13■■■□□ 2.73
HDAC11-216ENST00000458642 UACAQ9BZF9 1416 aa32.13■■■□□ 2.73
HDAC11-216ENST00000458642 UGGT2Q9NYU1 1516 aa32.11■■■□□ 2.73
HDAC11-216ENST00000458642 PPRC1Q5VV67 1664 aaKnown RBP32.11■■■□□ 2.73
HDAC11-216ENST00000458642 PLB1Q6P1J6 1458 aa32.08■■■□□ 2.73
HDAC11-216ENST00000458642 KIAA0556O60303 1618 aa32.07■■■□□ 2.72
HDAC11-216ENST00000458642 GLI2P10070 1586 aa32.06■■■□□ 2.72
HDAC11-216ENST00000458642 KDM4FA0A1W2PPD8 638 aa32.05■■■□□ 2.72
HDAC11-216ENST00000458642 KDM5BQ9UGL1 1544 aa32.02■■■□□ 2.72
HDAC11-216ENST00000458642 ZCCHC11Q5TAX3 1644 aaKnown RBP32■■■□□ 2.71
HDAC11-216ENST00000458642 EPRSP07814 1512 aaKnown RBP31.97■■■□□ 2.71
HDAC11-216ENST00000458642 CTTNBP2Q8WZ74 1663 aa31.95■■■□□ 2.71
HDAC11-216ENST00000458642 MAP3K4Q9Y6R4 1608 aa31.93■■■□□ 2.7
HDAC11-216ENST00000458642 COL17A1Q9UMD9 1497 aaPredicted RBP31.91■■■□□ 2.7
HDAC11-216ENST00000458642 PRXQ9BXM0 1461 aa31.82■■■□□ 2.68
HDAC11-216ENST00000458642 WDR7Q9Y4E6 1490 aa31.81■■■□□ 2.68
HDAC11-216ENST00000458642 ABCA8O94911 1581 aa31.78■■■□□ 2.68
HDAC11-216ENST00000458642 GOLGA3Q08378 1498 aa31.77■■■□□ 2.68
HDAC11-216ENST00000458642 TEX14Q8IWB6 1497 aa31.76■■■□□ 2.67
HDAC11-216ENST00000458642 ADGRL1O94910 1474 aa31.74■■■□□ 2.67
HDAC11-216ENST00000458642 KCNH8Q96L42 1107 aa31.66■■■□□ 2.66
HDAC11-216ENST00000458642 P3H3Q8IVL6 736 aa31.63■■■□□ 2.65
HDAC11-216ENST00000458642 ARID3CA6NKF2 412 aa31.62■■■□□ 2.65
HDAC11-216ENST00000458642 CD109Q6YHK3 1445 aa31.62■■■□□ 2.65
HDAC11-216ENST00000458642 CFAP43Q8NDM7 1665 aa31.62■■■□□ 2.65
HDAC11-216ENST00000458642 MAGI3Q5TCQ9 1506 aa31.59■■■□□ 2.65
HDAC11-216ENST00000458642 ATP10BO94823 1461 aa31.52■■■□□ 2.64
HDAC11-216ENST00000458642 SAMD9Q5K651 1589 aa31.5■■■□□ 2.63
HDAC11-216ENST00000458642 CSRNP3Q8WYN3 585 aa31.49■■■□□ 2.63
HDAC11-216ENST00000458642 RAPGEF6Q8TEU7 1601 aa31.4■■■□□ 2.62
HDAC11-216ENST00000458642 KIF21BO75037 1637 aa31.39■■■□□ 2.62
HDAC11-216ENST00000458642 RANGAP1P46060 587 aaPredicted RBP31.38■■■□□ 2.61
HDAC11-216ENST00000458642 HECW2Q9P2P5 1572 aa31.38■■■□□ 2.61
HDAC11-216ENST00000458642 ABCA9Q8IUA7 1624 aa31.38■■■□□ 2.61
HDAC11-216ENST00000458642 ARAP3Q8WWN8 1544 aa31.35■■■□□ 2.61
HDAC11-216ENST00000458642 FAM9AQ8IZU1 332 aaPredicted RBP31.32■■■□□ 2.6
HDAC11-216ENST00000458642 FHOD3Q2V2M9 1422 aa31.32■■■□□ 2.6
HDAC11-216ENST00000458642 NUP153P49790 1475 aaKnown RBP31.31■■■□□ 2.6
HDAC11-216ENST00000458642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.27■■■□□ 2.6
HDAC11-216ENST00000458642 HNRNPUL2Q1KMD3 747 aaKnown RBP31.27■■■□□ 2.6
HDAC11-216ENST00000458642 EEA1Q15075 1411 aa31.25■■■□□ 2.59
HDAC11-216ENST00000458642 RAPGEF3O95398 923 aa31.24■■■□□ 2.59
HDAC11-216ENST00000458642 ILDR1Q86SU0 546 aaPredicted RBP31.23■■■□□ 2.59
HDAC11-216ENST00000458642 FRMPD1Q5SYB0 1578 aa31.2■■■□□ 2.58
HDAC11-216ENST00000458642 NEO1Q92859 1461 aa31.18■■■□□ 2.58
HDAC11-216ENST00000458642 PHLDB1Q86UU1 1377 aa31.16■■■□□ 2.58
HDAC11-216ENST00000458642 ADAMTSL3P82987 1691 aa31.09■■■□□ 2.57
HDAC11-216ENST00000458642 EFCAB5A4FU69 1503 aa31.08■■■□□ 2.57
HDAC11-216ENST00000458642 EHMT2Q96KQ7 1210 aa31.07■■■□□ 2.56
HDAC11-216ENST00000458642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.05■■■□□ 2.56
HDAC11-216ENST00000458642 PLEKHD1A6NEE1 506 aa31.05■■■□□ 2.56
HDAC11-216ENST00000458642 TTC37Q6PGP7 1564 aa31.05■■■□□ 2.56
HDAC11-216ENST00000458642 PTPRMP28827 1452 aa31.04■■■□□ 2.56
HDAC11-216ENST00000458642 CDK13Q14004 1512 aaKnown RBP31.03■■■□□ 2.56
HDAC11-216ENST00000458642 BCORL1Q5H9F3 1711 aa31.01■■■□□ 2.56
HDAC11-216ENST00000458642 RICTORQ6R327 1708 aa31.01■■■□□ 2.56
HDAC11-216ENST00000458642 AKNAQ7Z591 1439 aa30.99■■■□□ 2.55
HDAC11-216ENST00000458642 MADDQ8WXG6 1647 aa30.99■■■□□ 2.55
HDAC11-216ENST00000458642 FANCAO15360 1455 aa30.99■■■□□ 2.55
HDAC11-216ENST00000458642 DENND4BO75064 1496 aaPredicted RBP30.98■■■□□ 2.55
HDAC11-216ENST00000458642 ARHGEF40Q8TER5 1519 aa30.98■■■□□ 2.55
HDAC11-216ENST00000458642 ARID4BQ4LE39 1312 aaPredicted RBP30.97■■■□□ 2.55
HDAC11-216ENST00000458642 CFAP74Q9C0B2 1584 aa30.92■■■□□ 2.54
HDAC11-216ENST00000458642 SIGLEC1Q9BZZ2 1709 aa30.9■■■□□ 2.54
HDAC11-216ENST00000458642 UBTFP17480 764 aaKnown RBP30.88■■■□□ 2.53
HDAC11-216ENST00000458642 YEATS2Q9ULM3 1422 aa30.87■■■□□ 2.53
HDAC11-216ENST00000458642 ARHGAP35Q9NRY4 1499 aa30.87■■■□□ 2.53
HDAC11-216ENST00000458642 RIMS1Q86UR5 1692 aaKnown RBP30.87■■■□□ 2.53
HDAC11-216ENST00000458642 ZMYM4Q5VZL5 1548 aa30.86■■■□□ 2.53
HDAC11-216ENST00000458642 ATP1B4Q9UN42 357 aaPredicted RBP30.84■■■□□ 2.53
HDAC11-216ENST00000458642 ZFYVE16Q7Z3T8 1539 aa30.82■■■□□ 2.52
HDAC11-216ENST00000458642 HECW1Q76N89 1606 aa30.81■■■□□ 2.52
HDAC11-216ENST00000458642 CHIC1Q5VXU3 224 aa30.81■■■□□ 2.52
HDAC11-216ENST00000458642 PLCH2O75038 1416 aa30.8■■■□□ 2.52
HDAC11-216ENST00000458642 PCF11O94913 1555 aaKnown RBP30.79■■■□□ 2.52
HDAC11-216ENST00000458642 LMTK3Q96Q04 1460 aa30.79■■■□□ 2.52
HDAC11-216ENST00000458642 KIF14Q15058 1648 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms