RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 NISCHQ9Y2I1 1504 aa46.89■■■■■ 5.1
HDAC11-216ENST00000458642 ABCC9O60706 1549 aa42.33■■■■■ 4.37
HDAC11-216ENST00000458642 CCDC180Q9P1Z9 1646 aa42.09■■■■■ 4.33
HDAC11-216ENST00000458642 RB1CC1Q8TDY2 1594 aa40.12■■■■■ 4.01
HDAC11-216ENST00000458642 DNAJC5BQ9UF47 199 aa39.88■■■■□ 3.97
HDAC11-216ENST00000458642 NACADO15069 1562 aa39.8■■■■□ 3.96
HDAC11-216ENST00000458642 DCAF8L2P0C7V8 631 aa39.66■■■■□ 3.94
HDAC11-216ENST00000458642 PABPN1Q86U42 306 aaKnown RBP eCLIP39.4■■■■□ 3.9
HDAC11-216ENST00000458642 UNC13AQ9UPW8 1703 aa39.34■■■■□ 3.89
HDAC11-216ENST00000458642 MYO15BQ96JP2 1530 aa39.16■■■■□ 3.86
HDAC11-216ENST00000458642 BICRAQ9NZM4 1560 aa39.08■■■■□ 3.85
HDAC11-216ENST00000458642 ZCCHC6Q5VYS8 1495 aaKnown RBP38.85■■■■□ 3.81
HDAC11-216ENST00000458642 DCAF1Q9Y4B6 1507 aa38.64■■■■□ 3.78
HDAC11-216ENST00000458642 SCRIBQ14160 1630 aa38.46■■■■□ 3.75
HDAC11-216ENST00000458642 SHROOM4Q9ULL8 1493 aa38.34■■■■□ 3.73
HDAC11-216ENST00000458642 CC2D2AQ9P2K1 1620 aa38.21■■■■□ 3.71
HDAC11-216ENST00000458642 CECR2Q9BXF3 1484 aa38.09■■■■□ 3.69
HDAC11-216ENST00000458642 EIF4G1Q04637 1599 aaKnown RBP38.08■■■■□ 3.69
HDAC11-216ENST00000458642 NCAPD3P42695 1498 aa36.76■■■■□ 3.48
HDAC11-216ENST00000458642 ATAD2BQ9ULI0 1458 aa36.68■■■■□ 3.46
HDAC11-216ENST00000458642 SMARCA4P51532 1647 aa36.63■■■■□ 3.45
HDAC11-216ENST00000458642 DNAJC5Q9H3Z4 198 aa36.58■■■■□ 3.45
HDAC11-216ENST00000458642 SMARCA2P51531 1590 aa36.51■■■■□ 3.44
HDAC11-216ENST00000458642 HMGXB3Q12766 1538 aa36.49■■■■□ 3.43
HDAC11-216ENST00000458642 ERCC6Q03468 1493 aa36.48■■■■□ 3.43
HDAC11-216ENST00000458642 CUX2O14529 1486 aa36.42■■■■□ 3.42
HDAC11-216ENST00000458642 NESP48681 1621 aa36.37■■■■□ 3.41
HDAC11-216ENST00000458642 BAZ1AQ9NRL2 1556 aaPredicted RBP36.36■■■■□ 3.41
HDAC11-216ENST00000458642 BAZ1BQ9UIG0 1483 aaKnown RBP36.3■■■■□ 3.4
HDAC11-216ENST00000458642 PEG3Q9GZU2 1588 aa36.22■■■■□ 3.39
HDAC11-216ENST00000458642 MROH2BQ7Z745 1585 aa36.19■■■■□ 3.38
HDAC11-216ENST00000458642 THOC2Q8NI27 1593 aaKnown RBP35.98■■■■□ 3.35
HDAC11-216ENST00000458642 LAMC3Q9Y6N6 1575 aa35.95■■■■□ 3.35
HDAC11-216ENST00000458642 KIF21AQ7Z4S6 1674 aa35.87■■■■□ 3.33
HDAC11-216ENST00000458642 WIZO95785 1651 aa35.77■■■■□ 3.32
HDAC11-216ENST00000458642 PDS5BQ9NTI5 1447 aa35.72■■■■□ 3.31
HDAC11-216ENST00000458642 CADPSQ9ULU8 1353 aa35.64■■■■□ 3.3
HDAC11-216ENST00000458642 MRC2Q9UBG0 1479 aa35.48■■■■□ 3.27
HDAC11-216ENST00000458642 WDR62O43379 1518 aa35.41■■■■□ 3.26
HDAC11-216ENST00000458642 RSF1Q96T23 1441 aaPredicted RBP35.36■■■■□ 3.25
HDAC11-216ENST00000458642 CEP164Q9UPV0 1460 aa35.31■■■■□ 3.24
HDAC11-216ENST00000458642 FANCD2Q9BXW9 1451 aa35.28■■■■□ 3.24
HDAC11-216ENST00000458642 CFTRP13569 1480 aa35.23■■■■□ 3.23
HDAC11-216ENST00000458642 TOP2AP11388 1531 aaKnown RBP35.23■■■■□ 3.23
HDAC11-216ENST00000458642 URB2Q14146 1524 aaKnown RBP35.05■■■■□ 3.2
HDAC11-216ENST00000458642 TRIM41Q8WV44 630 aa35■■■■□ 3.19
HDAC11-216ENST00000458642 PRDM2Q13029 1718 aa34.87■■■■□ 3.17
HDAC11-216ENST00000458642 CCDC88BA6NC98 1476 aa34.86■■■■□ 3.17
HDAC11-216ENST00000458642 OSCARQ8IYS5 282 aa34.72■■■■□ 3.15
HDAC11-216ENST00000458642 ZNF608Q9ULD9 1512 aaPredicted RBP34.66■■■■□ 3.14
HDAC11-216ENST00000458642 TOPBP1Q92547 1522 aa34.61■■■■□ 3.13
HDAC11-216ENST00000458642 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
HDAC11-216ENST00000458642 DNMBPQ6XZF7 1577 aa34.45■■■■□ 3.1
HDAC11-216ENST00000458642 EIF4G3O43432 1585 aaKnown RBP34.43■■■■□ 3.1
HDAC11-216ENST00000458642 RIMBP3CA6NJZ7 1639 aa34.4■■■■□ 3.1
HDAC11-216ENST00000458642 RIMBP3BA6NNM3 1639 aa34.4■■■■□ 3.1
HDAC11-216ENST00000458642 RIMBP3Q9UFD9 1639 aa34.4■■■■□ 3.1
HDAC11-216ENST00000458642 ABCC8Q09428 1581 aa34.4■■■■□ 3.1
HDAC11-216ENST00000458642 TARBP1Q13395 1621 aaKnown RBP34.33■■■■□ 3.09
HDAC11-216ENST00000458642 AQRO60306 1485 aaKnown RBP eCLIP34.3■■■■□ 3.082e-8■■■■■ 33.4
HDAC11-216ENST00000458642 POLA1P09884 1462 aaPredicted RBP34.26■■■■□ 3.07
HDAC11-216ENST00000458642 ARHGEF11O15085 1522 aa34.25■■■■□ 3.07
HDAC11-216ENST00000458642 CHD1O14646 1710 aa34.21■■■■□ 3.07
HDAC11-216ENST00000458642 RAD54L2Q9Y4B4 1467 aa34.18■■■■□ 3.06
HDAC11-216ENST00000458642 FBLN2P98095 1184 aa34.07■■■■□ 3.04
HDAC11-216ENST00000458642 TDRD9Q8NDG6 1382 aaKnown RBP34.07■■■■□ 3.04
HDAC11-216ENST00000458642 SOGA1O94964 1423 aa34.05■■■■□ 3.04
HDAC11-216ENST00000458642 FGD5Q6ZNL6 1462 aa34.03■■■■□ 3.04
HDAC11-216ENST00000458642 CUX1P39880 1505 aa34■■■■□ 3.03
HDAC11-216ENST00000458642 CYB5RLQ6IPT4 315 aa34■■■■□ 3.03
HDAC11-216ENST00000458642 SNAPC4Q5SXM2 1469 aa33.94■■■■□ 3.02
HDAC11-216ENST00000458642 ARAP1Q96P48 1450 aa33.94■■■■□ 3.02
HDAC11-216ENST00000458642 WDR97A6NE52 1622 aa33.84■■■■□ 3.01
HDAC11-216ENST00000458642 CLASP1Q7Z460 1538 aa33.79■■■■□ 3
HDAC11-216ENST00000458642 GRIN2BQ13224 1484 aa33.76■■■■□ 3
HDAC11-216ENST00000458642 MAGI1Q96QZ7 1491 aaPredicted RBP33.76■■■■□ 3
HDAC11-216ENST00000458642 CHMP7Q8WUX9 453 aaPredicted RBP33.74■■■□□ 2.99
HDAC11-216ENST00000458642 SUPT5HO00267 1087 aaKnown RBP33.72■■■□□ 2.99
HDAC11-216ENST00000458642 SYNJ1O43426 1573 aa33.69■■■□□ 2.98
HDAC11-216ENST00000458642 PBRM1Q86U86 1689 aa33.69■■■□□ 2.98
HDAC11-216ENST00000458642 SYNJ2O15056 1496 aa33.68■■■□□ 2.98
HDAC11-216ENST00000458642 GAPVD1Q14C86 1478 aa33.64■■■□□ 2.98
HDAC11-216ENST00000458642 TRHP20396 242 aaPredicted RBP33.64■■■□□ 2.98
HDAC11-216ENST00000458642 ABCA5Q8WWZ7 1642 aa33.6■■■□□ 2.97
HDAC11-216ENST00000458642 ABCA10Q8WWZ4 1543 aa33.59■■■□□ 2.97
HDAC11-216ENST00000458642 WRNQ14191 1432 aaPredicted RBP eCLIP33.4■■■□□ 2.945e-6■■■■■ 29.2
HDAC11-216ENST00000458642 BIVM-ERCC5R4GMW8 1640 aa33.39■■■□□ 2.93
HDAC11-216ENST00000458642 TOP2BQ02880 1626 aa33.37■■■□□ 2.93
HDAC11-216ENST00000458642 GRIN2AQ12879 1464 aa33.36■■■□□ 2.93
HDAC11-216ENST00000458642 ADAMTS12P58397 1594 aa33.35■■■□□ 2.93
HDAC11-216ENST00000458642 ERCC6L2Q5T890 1561 aa33.34■■■□□ 2.93
HDAC11-216ENST00000458642 CEP170Q5SW79 1584 aa33.3■■■□□ 2.92
HDAC11-216ENST00000458642 NUP160Q12769 1436 aa33.25■■■□□ 2.91
HDAC11-216ENST00000458642 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
HDAC11-216ENST00000458642 ERICH3Q5RHP9 1530 aa33.14■■■□□ 2.9
HDAC11-216ENST00000458642 SHROOM2Q13796 1616 aa33.13■■■□□ 2.89
HDAC11-216ENST00000458642 PRG4Q92954 1404 aaPredicted RBP32.94■■■□□ 2.86
HDAC11-216ENST00000458642 RUSC2Q8N2Y8 1516 aa32.9■■■□□ 2.86
HDAC11-216ENST00000458642 JPH4Q96JJ6 628 aa32.88■■■□□ 2.85
HDAC11-216ENST00000458642 KIF13AQ9H1H9 1805 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms