RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 JPH4Q96JJ6 628 aa27.64■■■□□ 2.02
CHCHD3-204ENST00000457942 FAM69CQ0P6D2 419 aa27.63■■■□□ 2.01
CHCHD3-204ENST00000457942 DIP2BQ9P265 1576 aa27.61■■■□□ 2.01
CHCHD3-204ENST00000457942 ADCY10Q96PN6 1610 aa27.61■■■□□ 2.01
CHCHD3-204ENST00000457942 ABCC10Q5T3U5 1492 aa27.61■■■□□ 2.01
CHCHD3-204ENST00000457942 MAPKBP1O60336 1514 aa27.57■■■□□ 2
CHCHD3-204ENST00000457942 NPM1P06748 294 aaKnown RBP eCLIP27.54■■■□□ 2
CHCHD3-204ENST00000457942 KDM6BO15054 1643 aa27.53■■■□□ 2
CHCHD3-204ENST00000457942 TSPOAP1O95153 1857 aa27.51■■□□□ 1.99
CHCHD3-204ENST00000457942 TTBK1Q5TCY1 1321 aaPredicted RBP27.41■■□□□ 1.98
CHCHD3-204ENST00000457942 KIAA0586Q9BVV6 1533 aa27.39■■□□□ 1.98
CHCHD3-204ENST00000457942 KDM4FA0A1W2PPD8 638 aa27.38■■□□□ 1.97
CHCHD3-204ENST00000457942 CUL7Q14999 1698 aa27.35■■□□□ 1.97
CHCHD3-204ENST00000457942 KIF27Q86VH2 1401 aa27.33■■□□□ 1.97
CHCHD3-204ENST00000457942 IGF1RP08069 1367 aa27.28■■□□□ 1.96
CHCHD3-204ENST00000457942 PTPRGP23470 1445 aa27.25■■□□□ 1.95
CHCHD3-204ENST00000457942 PPRC1Q5VV67 1664 aaKnown RBP27.21■■□□□ 1.95
CHCHD3-204ENST00000457942 ABCC2Q92887 1545 aa27.2■■□□□ 1.94
CHCHD3-204ENST00000457942 ASXL2Q76L83 1435 aa27.18■■□□□ 1.94
CHCHD3-204ENST00000457942 IQGAP2Q13576 1575 aa27.15■■□□□ 1.94
CHCHD3-204ENST00000457942 TNIKQ9UKE5 1360 aa27.15■■□□□ 1.94
CHCHD3-204ENST00000457942 CARMIL2Q6F5E8 1435 aa27.15■■□□□ 1.94
CHCHD3-204ENST00000457942 ADGRL1O94910 1474 aa27.14■■□□□ 1.94
CHCHD3-204ENST00000457942 CARMIL1Q5VZK9 1371 aa27.12■■□□□ 1.93
CHCHD3-204ENST00000457942 ILDR1Q86SU0 546 aaPredicted RBP27.11■■□□□ 1.93
CHCHD3-204ENST00000457942 PLB1Q6P1J6 1458 aa27.1■■□□□ 1.93
CHCHD3-204ENST00000457942 GLI2P10070 1586 aa27.09■■□□□ 1.93
CHCHD3-204ENST00000457942 UHRF1BP1LA0JNW5 1464 aa27.03■■□□□ 1.92
CHCHD3-204ENST00000457942 DISP1Q96F81 1524 aa27.03■■□□□ 1.92
CHCHD3-204ENST00000457942 UACAQ9BZF9 1416 aa27.03■■□□□ 1.92
CHCHD3-204ENST00000457942 MAP3K4Q9Y6R4 1608 aa27.01■■□□□ 1.92
CHCHD3-204ENST00000457942 COL17A1Q9UMD9 1497 aaPredicted RBP27.01■■□□□ 1.91
CHCHD3-204ENST00000457942 ZCCHC11Q5TAX3 1644 aaKnown RBP27.01■■□□□ 1.91
CHCHD3-204ENST00000457942 EPRSP07814 1512 aaKnown RBP27■■□□□ 1.91
CHCHD3-204ENST00000457942 HECW2Q9P2P5 1572 aa26.96■■□□□ 1.91
CHCHD3-204ENST00000457942 KDM5BQ9UGL1 1544 aa26.94■■□□□ 1.9
CHCHD3-204ENST00000457942 KIAA0556O60303 1618 aa26.93■■□□□ 1.9
CHCHD3-204ENST00000457942 TEX14Q8IWB6 1497 aa26.92■■□□□ 1.9
CHCHD3-204ENST00000457942 UGGT2Q9NYU1 1516 aa26.89■■□□□ 1.89
CHCHD3-204ENST00000457942 RAPGEF2Q9Y4G8 1499 aa26.88■■□□□ 1.89
CHCHD3-204ENST00000457942 WDR7Q9Y4E6 1490 aa26.83■■□□□ 1.89
CHCHD3-204ENST00000457942 CTTNBP2Q8WZ74 1663 aa26.76■■□□□ 1.87
CHCHD3-204ENST00000457942 KIF21BO75037 1637 aa26.72■■□□□ 1.87
CHCHD3-204ENST00000457942 CFAP43Q8NDM7 1665 aa26.71■■□□□ 1.87
CHCHD3-204ENST00000457942 KCNH8Q96L42 1107 aa26.7■■□□□ 1.86
CHCHD3-204ENST00000457942 CD109Q6YHK3 1445 aa26.7■■□□□ 1.86
CHCHD3-204ENST00000457942 ABCA8O94911 1581 aa26.67■■□□□ 1.86
CHCHD3-204ENST00000457942 MAGI3Q5TCQ9 1506 aa26.65■■□□□ 1.86
CHCHD3-204ENST00000457942 ARID3CA6NKF2 412 aa26.63■■□□□ 1.85
CHCHD3-204ENST00000457942 GOLGA3Q08378 1498 aa26.61■■□□□ 1.85
CHCHD3-204ENST00000457942 PRXQ9BXM0 1461 aa26.61■■□□□ 1.85
CHCHD3-204ENST00000457942 P3H3Q8IVL6 736 aa26.47■■□□□ 1.83
CHCHD3-204ENST00000457942 CSRNP3Q8WYN3 585 aa26.46■■□□□ 1.83
CHCHD3-204ENST00000457942 ARAP3Q8WWN8 1544 aa26.45■■□□□ 1.83
CHCHD3-204ENST00000457942 ATP10BO94823 1461 aa26.42■■□□□ 1.82
CHCHD3-204ENST00000457942 EEA1Q15075 1411 aa26.41■■□□□ 1.82
CHCHD3-204ENST00000457942 ABCA9Q8IUA7 1624 aa26.41■■□□□ 1.82
CHCHD3-204ENST00000457942 PTPRMP28827 1452 aa26.41■■□□□ 1.82
CHCHD3-204ENST00000457942 ADAMTSL3P82987 1691 aa26.41■■□□□ 1.82
CHCHD3-204ENST00000457942 FAM9AQ8IZU1 332 aaPredicted RBP26.38■■□□□ 1.81
CHCHD3-204ENST00000457942 RAPGEF3O95398 923 aa26.37■■□□□ 1.81
CHCHD3-204ENST00000457942 MADDQ8WXG6 1647 aa26.36■■□□□ 1.81
CHCHD3-204ENST00000457942 FBXO41Q8TF61 875 aa26.36■■□□□ 1.81
CHCHD3-204ENST00000457942 FRMPD1Q5SYB0 1578 aa26.36■■□□□ 1.81
CHCHD3-204ENST00000457942 BCORL1Q5H9F3 1711 aa26.33■■□□□ 1.81
CHCHD3-204ENST00000457942 RAPGEF6Q8TEU7 1601 aa26.32■■□□□ 1.8
CHCHD3-204ENST00000457942 ARID4BQ4LE39 1312 aaPredicted RBP26.31■■□□□ 1.8
CHCHD3-204ENST00000457942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.3■■□□□ 1.8
CHCHD3-204ENST00000457942 HNRNPUL2Q1KMD3 747 aaKnown RBP26.3■■□□□ 1.8
CHCHD3-204ENST00000457942 SAMD9Q5K651 1589 aa26.29■■□□□ 1.8
CHCHD3-204ENST00000457942 PCF11O94913 1555 aaKnown RBP26.29■■□□□ 1.8
CHCHD3-204ENST00000457942 RANGAP1P46060 587 aaPredicted RBP26.28■■□□□ 1.8
CHCHD3-204ENST00000457942 NEO1Q92859 1461 aa26.27■■□□□ 1.8
CHCHD3-204ENST00000457942 RIMS1Q86UR5 1692 aaKnown RBP26.27■■□□□ 1.8
CHCHD3-204ENST00000457942 ARHGEF40Q8TER5 1519 aa26.24■■□□□ 1.79
CHCHD3-204ENST00000457942 LMTK3Q96Q04 1460 aa26.24■■□□□ 1.79
CHCHD3-204ENST00000457942 PHLDB1Q86UU1 1377 aa26.23■■□□□ 1.79
CHCHD3-204ENST00000457942 PLPPR3Q6T4P5 718 aa26.23■■□□□ 1.79
CHCHD3-204ENST00000457942 NUP153P49790 1475 aaKnown RBP26.2■■□□□ 1.78
CHCHD3-204ENST00000457942 RICTORQ6R327 1708 aa26.17■■□□□ 1.78
CHCHD3-204ENST00000457942 FHOD3Q2V2M9 1422 aa26.16■■□□□ 1.78
CHCHD3-204ENST00000457942 DENND4BO75064 1496 aaPredicted RBP26.13■■□□□ 1.77
CHCHD3-204ENST00000457942 HSPA2P54652 639 aa26.13■■□□□ 1.77
CHCHD3-204ENST00000457942 EHMT2Q96KQ7 1210 aa26.12■■□□□ 1.77
CHCHD3-204ENST00000457942 SIGLEC1Q9BZZ2 1709 aa26.11■■□□□ 1.77
CHCHD3-204ENST00000457942 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
CHCHD3-204ENST00000457942 TTC37Q6PGP7 1564 aa26.11■■□□□ 1.77
CHCHD3-204ENST00000457942 FANCAO15360 1455 aa26.1■■□□□ 1.77
CHCHD3-204ENST00000457942 EFCAB5A4FU69 1503 aa26.09■■□□□ 1.77
CHCHD3-204ENST00000457942 CFAP74Q9C0B2 1584 aa26.09■■□□□ 1.77
CHCHD3-204ENST00000457942 AKNAQ7Z591 1439 aa26.08■■□□□ 1.77
CHCHD3-204ENST00000457942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.07■■□□□ 1.769e-10■■□□□ 14.3
CHCHD3-204ENST00000457942 ZFYVE16Q7Z3T8 1539 aa26.06■■□□□ 1.76
CHCHD3-204ENST00000457942 YEATS2Q9ULM3 1422 aa26.05■■□□□ 1.76
CHCHD3-204ENST00000457942 UBTFP17480 764 aaKnown RBP26.04■■□□□ 1.76
CHCHD3-204ENST00000457942 MLECQ14165 292 aa26.03■■□□□ 1.76
CHCHD3-204ENST00000457942 ZMYM4Q5VZL5 1548 aa26.03■■□□□ 1.76
CHCHD3-204ENST00000457942 FER1L4A9Z1Z3 1794 aa26.01■■□□□ 1.75
CHCHD3-204ENST00000457942 POGZQ7Z3K3 1410 aa26■■□□□ 1.75
CHCHD3-204ENST00000457942 PLEKHD1A6NEE1 506 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms