RNA–Protein interactions for RNA: ENST00000457939.1

COA1-214, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 3

Gene COA1, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-214ENST00000457939 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
COA1-214ENST00000457939 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
COA1-214ENST00000457939 SHROOM2Q13796 1616 aa17.84■□□□□ 0.45
COA1-214ENST00000457939 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
COA1-214ENST00000457939 JPH4Q96JJ6 628 aa17.81■□□□□ 0.44
COA1-214ENST00000457939 PRG4Q92954 1404 aaPredicted RBP17.78■□□□□ 0.44
COA1-214ENST00000457939 ERCC6L2Q5T890 1561 aa17.77■□□□□ 0.44
COA1-214ENST00000457939 FAM9AQ8IZU1 332 aaPredicted RBP17.74■□□□□ 0.43
COA1-214ENST00000457939 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
COA1-214ENST00000457939 IQGAP2Q13576 1575 aa17.73■□□□□ 0.43
COA1-214ENST00000457939 UGGT2Q9NYU1 1516 aa17.7■□□□□ 0.42
COA1-214ENST00000457939 KIF21BO75037 1637 aa17.69■□□□□ 0.42
COA1-214ENST00000457939 DISP1Q96F81 1524 aa17.66■□□□□ 0.42
COA1-214ENST00000457939 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.42
COA1-214ENST00000457939 GOLGA3Q08378 1498 aa17.62■□□□□ 0.41
COA1-214ENST00000457939 TNIKQ9UKE5 1360 aa17.61■□□□□ 0.41
COA1-214ENST00000457939 CTTNBP2Q8WZ74 1663 aa17.58■□□□□ 0.41
COA1-214ENST00000457939 PTPRGP23470 1445 aa17.58■□□□□ 0.41
COA1-214ENST00000457939 KIAA0556O60303 1618 aa17.58■□□□□ 0.4
COA1-214ENST00000457939 SAMD9Q5K651 1589 aa17.51■□□□□ 0.39
COA1-214ENST00000457939 UBTFP17480 764 aaKnown RBP17.49■□□□□ 0.39
COA1-214ENST00000457939 UHRF1BP1LA0JNW5 1464 aa17.49■□□□□ 0.39
COA1-214ENST00000457939 UACAQ9BZF9 1416 aa17.47■□□□□ 0.39
COA1-214ENST00000457939 ADCY10Q96PN6 1610 aa17.47■□□□□ 0.39
COA1-214ENST00000457939 EFCAB5A4FU69 1503 aa17.46■□□□□ 0.39
COA1-214ENST00000457939 EHMT2Q96KQ7 1210 aa17.45■□□□□ 0.38
COA1-214ENST00000457939 ABCC2Q92887 1545 aa17.44■□□□□ 0.38
COA1-214ENST00000457939 TTBK1Q5TCY1 1321 aaPredicted RBP17.43■□□□□ 0.38
COA1-214ENST00000457939 PLB1Q6P1J6 1458 aa17.42■□□□□ 0.38
COA1-214ENST00000457939 FHOD3Q2V2M9 1422 aa17.41■□□□□ 0.38
COA1-214ENST00000457939 ABCA8O94911 1581 aa17.4■□□□□ 0.38
COA1-214ENST00000457939 P3H3Q8IVL6 736 aa17.4■□□□□ 0.38
COA1-214ENST00000457939 MAPKBP1O60336 1514 aa17.4■□□□□ 0.38
COA1-214ENST00000457939 ARHGAP35Q9NRY4 1499 aa17.39■□□□□ 0.37
COA1-214ENST00000457939 KDM5BQ9UGL1 1544 aa17.39■□□□□ 0.37
COA1-214ENST00000457939 RANGAP1P46060 587 aaPredicted RBP17.38■□□□□ 0.37
COA1-214ENST00000457939 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
COA1-214ENST00000457939 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
COA1-214ENST00000457939 CLIP1P30622 1438 aa17.3■□□□□ 0.36
COA1-214ENST00000457939 FMN1Q68DA7 1419 aa17.3■□□□□ 0.36
COA1-214ENST00000457939 NUP153P49790 1475 aaKnown RBP17.3■□□□□ 0.36
COA1-214ENST00000457939 ASXL2Q76L83 1435 aa17.3■□□□□ 0.36
COA1-214ENST00000457939 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
COA1-214ENST00000457939 ATP10BO94823 1461 aa17.26■□□□□ 0.35
COA1-214ENST00000457939 RAPGEF6Q8TEU7 1601 aa17.26■□□□□ 0.35
COA1-214ENST00000457939 CEP162Q5TB80 1403 aa17.25■□□□□ 0.35
COA1-214ENST00000457939 LOC105371045A0A1W2PR82 267 aa17.25■□□□□ 0.35
COA1-214ENST00000457939 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
COA1-214ENST00000457939 WDR7Q9Y4E6 1490 aa17.24■□□□□ 0.35
COA1-214ENST00000457939 DIP2BQ9P265 1576 aa17.23■□□□□ 0.35
COA1-214ENST00000457939 FAM69CQ0P6D2 419 aa17.21■□□□□ 0.35
COA1-214ENST00000457939 EPRSP07814 1512 aaKnown RBP17.2■□□□□ 0.34
COA1-214ENST00000457939 CASKIN1Q8WXD9 1431 aa17.2■□□□□ 0.34
COA1-214ENST00000457939 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
COA1-214ENST00000457939 GLI2P10070 1586 aa17.19■□□□□ 0.34
COA1-214ENST00000457939 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
COA1-214ENST00000457939 FYCO1Q9BQS8 1478 aa17.14■□□□□ 0.33
COA1-214ENST00000457939 CDK13Q14004 1512 aaKnown RBP17.12■□□□□ 0.33
COA1-214ENST00000457939 PCF11O94913 1555 aaKnown RBP17.12■□□□□ 0.33
COA1-214ENST00000457939 KIF13AQ9H1H9 1805 aa17.12■□□□□ 0.33
COA1-214ENST00000457939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
COA1-214ENST00000457939 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
COA1-214ENST00000457939 CCDC18Q5T9S5 1454 aa17.09■□□□□ 0.33
COA1-214ENST00000457939 PLEKHD1A6NEE1 506 aa17.08■□□□□ 0.32
COA1-214ENST00000457939 KCNH8Q96L42 1107 aa17.06■□□□□ 0.32
COA1-214ENST00000457939 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
COA1-214ENST00000457939 MAP3K4Q9Y6R4 1608 aa17.06■□□□□ 0.32
COA1-214ENST00000457939 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
COA1-214ENST00000457939 CDK11AQ9UQ88 783 aaPredicted RBP17.04■□□□□ 0.32
COA1-214ENST00000457939 MAGI3Q5TCQ9 1506 aa17.04■□□□□ 0.32
COA1-214ENST00000457939 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
COA1-214ENST00000457939 CD109Q6YHK3 1445 aa17.04■□□□□ 0.32
COA1-214ENST00000457939 ABCA9Q8IUA7 1624 aa17.02■□□□□ 0.31
COA1-214ENST00000457939 TEX14Q8IWB6 1497 aa17.01■□□□□ 0.31
COA1-214ENST00000457939 PPRC1Q5VV67 1664 aaKnown RBP17■□□□□ 0.31
COA1-214ENST00000457939 CFAP43Q8NDM7 1665 aa16.98■□□□□ 0.31
COA1-214ENST00000457939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.98■□□□□ 0.31
COA1-214ENST00000457939 LRRIQ1Q96JM4 1722 aa16.98■□□□□ 0.31
COA1-214ENST00000457939 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
COA1-214ENST00000457939 NEO1Q92859 1461 aa16.93■□□□□ 0.3
COA1-214ENST00000457939 COL17A1Q9UMD9 1497 aaPredicted RBP16.93■□□□□ 0.3
COA1-214ENST00000457939 KIF14Q15058 1648 aa16.92■□□□□ 0.3
COA1-214ENST00000457939 PHLDB1Q86UU1 1377 aa16.92■□□□□ 0.3
COA1-214ENST00000457939 PLCH2O75038 1416 aa16.92■□□□□ 0.3
COA1-214ENST00000457939 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
COA1-214ENST00000457939 ARAP3Q8WWN8 1544 aa16.91■□□□□ 0.3
COA1-214ENST00000457939 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.29
COA1-214ENST00000457939 KDM6BO15054 1643 aa16.88■□□□□ 0.29
COA1-214ENST00000457939 EHBP1L1Q8N3D4 1523 aa16.88■□□□□ 0.29
COA1-214ENST00000457939 TIAM1Q13009 1591 aa16.88■□□□□ 0.29
COA1-214ENST00000457939 FANCAO15360 1455 aa16.87■□□□□ 0.29
COA1-214ENST00000457939 TSPOAP1O95153 1857 aa16.86■□□□□ 0.29
COA1-214ENST00000457939 LRRC9Q6ZRR7 1453 aa16.85■□□□□ 0.29
COA1-214ENST00000457939 AKNAQ7Z591 1439 aa16.84■□□□□ 0.29
COA1-214ENST00000457939 GPATCH8Q9UKJ3 1502 aaKnown RBP16.82■□□□□ 0.28
COA1-214ENST00000457939 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
COA1-214ENST00000457939 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
COA1-214ENST00000457939 CFAP74Q9C0B2 1584 aa16.8■□□□□ 0.28
COA1-214ENST00000457939 NCOA2Q15596 1464 aa16.8■□□□□ 0.28
COA1-214ENST00000457939 ARHGAP5Q13017 1502 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms